LOINC
Version 2.67

76581-8Streptococcus pyogenes csrS gene [Presence] in XXX.swab by NAA with probe detectionActive

Term Description

This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC

Part Description

LP185686-5   Streptococcus pyogenes csrS gene
Streptococcus pyogenes is an important cause of pharyngitis as well as more severe infections, including sepsis and toxic shock syndrome. The csrS gene is associated with S pyogenes virulence, and therefore, its presence in clinical specimens can be used to identify this organism as one of the pathogens responsible for a specific infection. [PMID: 21371090] Source: Regenstrief LOINC, PMID: 21371090

Fully-Specified Name

Component
Streptococcus pyogenes csrS gene
Property
PrThr
Time
Pt
System
XXX.swab
Scale
Ord
Method
Probe.amp.tar

Additional Names

Short Name
S pyogenes csrS XXX.swab Ql NAA+probe
Display Name
S. pyogenes csrS gene NAA+probe Ql (Unsp swab)

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.52
Last Updated
Version 2.63
Change Reason
The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
Order vs. Observation
Observation

Example Answer List LL2994-3

Source: Bioinfomatics Research and Testing Laboratory

Answer Code Score Answer ID
Low (< 10^5 bacteria) LA21375-3
Medium (10^5-10^7 bacteria) LA21374-6
High (> 10^7 bacteria) LA21373-8

Member of these Panels

LOINC Long Common Name
76586-7 ENT microorganism gene identification panel by NAA with probe detection
76585-9 Wound microorganism gene identification panel by NAA with probe detection

Member of these Groups

LG41610-3 Streptococcus pyogenes

Language Variants Get Info

zh-CNChinese (CHINA)
化脓性链球菌 csrS 基因:存在情况或阈值:时间点:XXX.拭子:序数型:探针法.基因扩增.靶向
fr-FRFrench (FRANCE)
Streptococcus pyogenes csrS gene:PrThr:Pt:XXX.swab:Ord:Probe.amp.tar
it-ITItalian (ITALY)
Streptococcus pyogenes, gene csrS:PrThr:Pt:XXX.tampone:Ord:Sonda.amp.tar
es-ESSpanish (SPAIN)
gen csrS Streptococcus pyogenes:PrThr:Punto temporal:Escobillon XXX:Ord:Sonda con amplificación dirigida
tr-TRTurkish (TURKEY)
Streptococcus pyogenis csrS geni:MevcEşik:Zmlı:XXX.sürüntü:Srl:Prob.amf.hdf

LOINC FHIR® API Example - CodeSystem Request Get Info

https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=76581-8