LOINC
Version 2.72

80350-2Shigella species+EIEC invasion plasmid antigen H ipaH gene [Presence] in Stool by NAA with non-probe detectionActive

Term Description

This assay detects the invasion plasmid antigen H (ipaH) gene that is specific to Shigella species and enteroinvasive E. coli (EIEC) using PCR and melt curve analysis. The assay does not distinguish between Shigella and EIEC. This term was created for, but is not limited in use to, BioFire's FilmArray Gastrointestinal panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and parasites directly from stool samples from individuals with signs and/or symptoms of gastrointestinal infection.
Source: Regenstrief LOINC

Part Description

LP145956-1   Shigella species+EIEC invasion plasmid antigen H (ipaH) gene
The invasion plasmid antigen H (ipaH) gene is a multicopy gene exclusively found in all Shigella and enteroinvasive E. coli (EIEC). Shigella and EIEC both evolved from nonpathogenic Escherichia coli, and sequencing of multiple housekeeping genes indicates that EIEC is genetically related to Shigella. Shigella causes bacillary dysentery with symptoms including abdominal cramps, nausea, fever and a bloody and mucus diarrhea. By testing for the absence of lysine decarboxylase (LDC) activity and presence of the IpaH gene, Shigella and EIEC can be differentiated from non-enteroinvasive E. coli. [PMID:21901636] Source: Regenstrief LOINC, PMID: 21901636

Fully-Specified Name

Component
Shigella species+EIEC invasion plasmid antigen H (ipaH) gene
Property
PrThr
Time
Pt
System
Stool
Scale
Ord
Method
Non-probe.amp.tar

Additional Names

Short Name
Shigella sp+EIEC ipaH St NAA+non-probe
Display Name
Shigella species+EIEC invasion plasmid antigen H ipaH gene NAA+non-probe Ql (Stl)
Consumer Name Alpha
Shigella Species+EIEC Invasion Plasmid Antigen H IpaH gene, Stool

Example Answer List LL744-4

Source: Regenstrief Institute

Answer Code Score Answer ID
Detected LA11882-0
Not detected LA11883-8

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.54
Last Updated
Version 2.65
Change Reason
Changed Method from "Melt.amp.tar" to "Non-probe.amp.tar", which includes other non-probe based detection methods while still distinguishing from probe-based methods.; The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
Order vs. Observation
Observation

Member of these Panels

LOINC Long Common Name
82195-9 Gastrointestinal pathogens DNA and RNA panel - Stool by NAA with non-probe detection

Language Variants Get Info

zh-CNChinese (China)
志贺菌+肠侵袭性大肠埃希菌侵袭质粒抗原 H (ipaH) 基因:存在情况或阈值:时间点:大便:序数型:非探针法.基因扩增.靶向
fr-CAFrench (Canada)
Shigella+Escherichia coli entéroinvasif ipaH gène:Présence-Seuil:Temps ponctuel:Selles:Ordinal:Non-sonde.amplification de cible
fr-FRFrench (France)
Shigella+Escherichia coli entéroinvasif ipaH gène:Présence/Seuil:Ponctuel:Selles:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)
Specie shigella e Escherichia Coli enteroinvasive antigene H plasmidico di invasione batterica (ipaH), gene:PrThr:Pt:Feci:Ord:Non-sonda.amp.tar
es-MXSpanish (Mexico)
Especies de Shigella + gen del antígeno H (ipaH) del plásmido invasor EIEC:Presencia o umbral:Punto temporal:Heces:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
es-ESSpanish (Spain)
Gen antígeno H plasmídico invasor bacterial (ipaH):PrThr:Punto temporal:Heces:Ord:Amplificación del objetivo no basado en sonda

LOINC FHIR® API Example - CodeSystem Request Get Info

https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=80350-2