82195-9Gastrointestinal pathogens DNA and RNA panel - Stool by NAA with non-probe detectionActive
Term Description
This panel includes terms used to report the detection of various enteric pathogens in stool using PCR and non-probe-based detection methods, such as melt curve analysis. The targeted pathogens and detection rate may vary across test kits and for a single test kit over time. This panel was originally created for, but is not limited in use to, the FilmArray Gastrointestinal Panel (GI) (v2.1, 2015), which detects and identifies the following bacteria, parasites, and viruses: Campylobacter (C. jejuni/C. coli/C. upsaliensis), Clostridium difficile toxin A/B, Plesiomonas shigelloides, Salmonella, Vibrio (V. parahaemolyticus/V. vulnificus/V. cholerae), including specific identification of Vibrio cholerae, Yersinia enterocolitica, Enteroaggregative Escherichia coli (EAEC), Enteropathogenic Escherichia coli (EPEC), Enterotoxigenic Escherichia coli (ETEC) lt/st, Shiga-like toxin-producing Escherichia coli (STEC) stx1/stx2, Escherichia coli O157, Shigella/Enteroinvasive Escherichia coli (EIEC), Cryptosporidium, Cyclospora cayetanensis, Entamoeba histolytica, Giardia lamblia, Adenovirus F 40/41, Astrovirus, Norovirus GI/GII, Rotavirus A, and Sapovirus (Genogroups I, II, IV, and V).
Source: Regenstrief LOINC
Panel Hierarchy
Details for each LOINC in Panel
LHC-Forms
| LOINC | Name | R/O/C | Cardinality | Example UCUM Units |
|---|---|---|---|---|
| 82195-9 | Gastrointestinal pathogens DNA and RNA panel - Stool by NAA with non-probe detection | |||
| Indent82196-7 | Campylobacter coli+jejuni+upsaliensis DNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent82197-5 | Clostridioides difficile toxin A+B tcdA+tcdB genes [Presence] in Stool by NAA with non-probe detection | |||
| Indent82198-3 | Plesiomonas shigelloides DNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent82199-1 | Salmonella enterica+bongori DNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent82200-7 | Vibrio cholerae+parahaemolyticus+vulnificus DNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent82201-5 | Vibrio cholerae DNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent82202-3 | Yersinia enterocolitica DNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent80348-6 | Escherichia coli enteropathogenic eae gene [Presence] in Stool by NAA with non-probe detection | |||
| Indent80349-4 | Escherichia coli enteroaggregative pAA plasmid aggR+aatA genes [Presence] in Stool by NAA with non-probe detection | |||
| Indent80351-0 | Escherichia coli enterotoxigenic ltA+st1a+st1b genes [Presence] in Stool by NAA with non-probe detection | |||
| Indent82203-1 | Escherichia coli Stx1 and Stx2 toxin stx1+stx2 genes [Presence] in Stool by NAA with non-probe detection | |||
| Indent82204-9 | Escherichia coli O157 DNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent80350-2 | Shigella species+EIEC invasion plasmid antigen H ipaH gene [Presence] in Stool by NAA with non-probe detection | |||
| Indent82205-6 | Cryptosporidium sp DNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent82206-4 | Cyclospora cayetanensis DNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent82207-2 | Entamoeba histolytica DNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent82208-0 | Giardia lamblia DNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent82209-8 | Adenovirus 40+41 DNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent82210-6 | Astrovirus subtypes 1-8 RNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent82211-4 | Norovirus genogroup I+II RNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent82212-2 | Rotavirus A RNA [Presence] in Stool by NAA with non-probe detection | |||
| Indent82213-0 | Sapovirus genogroups I+II+IV+V RNA [Presence] in Stool by NAA with non-probe detection |
Fully-Specified Name
- Component
- Gastrointestinal pathogens DNA & RNA panel
- Property
- -
- Time
- Pt
- System
- Stool
- Scale
- -
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- GI path DNA+RNA Pnl Stl NAA+non-probe
- Display Name
- Gastrointestinal pathogens DNA and RNA panel NAA+non-probe (Stl)
- Consumer Name Alpha
- Gastrointestinal Pathogens DNA and RNA Panel, Stool
Basic Attributes
- Class
- PANEL.MICRO
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.63
- Order vs. Observation
- Order
- Panel Type
- Panel
Language Variants Get Info
- zh-CNChinese (China)
- 胃肠道病原体类 DNA 与 RNA 组套:
-: 时间点: 大便: -: 非探针法.基因扩增.靶向 - fr-FRFrench (France)
- Pathogènes gastrointestinaux ADN et ARN panel:
-: Ponctuel: Selles: -: Non-PCR amplification de cible - it-ITItalian (Italy)
- Patogenie DNA & RNA gastrointestinali,panel:
-: Pt: Feci: -: Non-sonda.amp.tar - es-MXSpanish (Mexico)
- Panel de ADN y ARN de patógenos gastrointestinales:
-: Punto temporal: Heces: -: Amplificación de ácidos nucleicos con detección sin sonda - es-ESSpanish (Spain)
- Panel de ADN y ARN de patógenos gastrointestinales:
Propiedades mixtas (sólo paneles): Punto temporal: Heces: -: Amplificación del objetivo no basado en sonda
LOINC FHIR® API Example - CodeSystem and Questionnaire Requests Get Info
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=82195-9
https://fhir.loinc.org/Questionnaire/?url=http://loinc.org/q/82195-9
LOINC Copyright
Copyright © 2022 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright