86732-5

Leptospira sp identified [Type] in Isolate by Sequencing

Active

Part Descriptions

LP14260-1   Leptospira sp
A genus of aerobic, helical spirochetes, some species of which are pathogenic, others free-living or saprophytic. Source: National Library of Medicine, MeSH 2006

LP14260-1   Leptospira sp
Leptospira is a genus of spirochaete bacteria, including a small number of pathogenic and saprophytic species. Leptospirosis (also known as Weil's syndrome, canicola fever and by other names) is caused by Leptospira, which can affect humans as well as other mammals, birds, amphibians, and reptiles. As of 2012, Leptospira is divided into 20 species based on DNA hybridization studies. Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details. Source: Wikipedia, Leptospira (Wikipedia)

LP150045-5   Sequencing
Sequencing is a method used to determine the sequence of individual genes, larger genetic regions (i.e. clusters of genes or operons), full chromosomes or entire genomes. Historically, most sequencing has been performed using the chain termination method developed by Frederick Sanger in 1977.[PMID: 271968] Sequencing technologies have improved dramatically, making them cheaper, faster, and more accurate. Next-generation sequencing (NGS), also known as high-throughput sequencing, deep sequencing, and second-generation sequencing, is a type of technology that uses parallel sequencing of multiple small fragments of DNA to determine sequence. This "high-throughput" technology has increased the speed and amount of DNA sequenced at a significantly reduced cost.[PMID: 18576944] Several NGS platforms (ie, sequencing instruments and associated reagents) have been developed. Third-generation sequencing is another methodology currently under development that uses parallel sequencing similar to NGS. In contrast to NGS, third-generation sequencing uses single DNA molecules rather than amplified DNA as a template.[PMID: 20858600] Source: Regenstrief LOINC

Fully-Specified Name

Component

Leptospira sp identified

Property

Type

Time

Pt

System

Isolate

Scale

Nom

Method

Sequencing

Additional Names

Short Name

Leptospira Islt Seq

Display Name

Leptospira sp identified Sequencing Nom (Isol)

Consumer Name Alpha

Leptospira sp test

Example Answer List: LL2090-0

Basic Attributes

Class

MICRO

Type

Laboratory

First Released

Version 2.61

Last Updated

Version 2.63

Change Reason

Corrected Property and Scale from Prid/Ord to Type/Nom since this concept is used to report the species of Leptospira identified.

Order vs. Observation

Both

Member of these Groups

Language Variants

Related Names

• high-throughput sequencing
• HTS
• ID
• Infectious Disease
• InfectiousDisease
• Islt
• Isol
• Isolated
• Leptospirosis
• Microbiology
• Next generation sequencing
• NGS
• Nominal
• Point in time
• Random
• species
• spp
• Typ

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Copyright © 2023 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © 1995-2023, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.