LOINC
Version 2.71

87621-9Bordetella parapertussis IS1001 DNA [Presence] in Nasopharynx by NAA with non-probe detectionActive

Term Description

The qualitative detection of the IS1001 insertional element DNA sequence of the Bordetella parapertussis genome in nasopharyngeal specimens. This term was created for, but not limited in use to, BioFire Diagnostic FilmArray Respiratory Panel 2 assay, a multiplex PCR-based assay which uses melt curve analysis for the detection of various respiratory tract infection-causing pathogens.
Source: Regenstrief LOINC

Part Description

LP248336-2   Bordetella parapertussis IS1001
The repetitive insertion sequence targets pIS1001 and hIS1001 are present in multiple copies per genome of Bordetella parapertussis and B. holmesii, respectively. The "p" in pIS1001 is for parapertussis and "h" in hIS1001 is for holmesii. These targets along with other target sequences (e.g. IS481) are used to detect and differentiate between B. pertussis, B. parapertussis, B. holmesii and other Bordetella species. [PMID: 21940464] Source: Regenstrief LOINC

Fully-Specified Name

Component
Bordetella parapertussis IS1001 DNA
Property
PrThr
Time
Pt
System
Nph
Scale
Ord
Method
Non-probe.amp.tar

Additional Names

Short Name
B parap IS1001 DNA Nph Ql NAA+non-probe
Display Name
B. parapertussis IS1001 DNA NAA+non-probe Ql (Nph)
Consumer Name Alpha
Bordetella parapertussis IS1001, Nasopharynx

Example Answer List LL744-4

Source: Regenstrief Institute

Answer Code Score Answer ID
Detected LA11882-0
Not detected LA11883-8

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.63
Last Updated
Version 2.64
Change Reason
Removed "p" from "pIS1001" in Component to better represent the name of this insertion sequence (IS) element present in various Bordetella species.
Order vs. Observation
Both

Member of these Panels

LOINC Long Common Name
82159-5 Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups

LG50885-9 Bordetella parapertussis IS1001 DNA|PrThr|Sys:ANYResp

Language Variants Get Info

zh-CNChinese (China)
副百日咳博德特菌 IS1001 DNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向
fr-FRFrench (France)
Bordetella parapertussis IS1001 ADN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)
Bordetella parapertussis pIS1001 DNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar
es-ESSpanish (Spain)
Bordetella parapertussis pIS1001 ADN:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda

LOINC FHIR® API Example - CodeSystem Request Get Info

https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=87621-9