87621-9Bordetella parapertussis IS1001 DNA [Presence] in Nasopharynx by NAA with non-probe detectionActive
Term Description
The qualitative detection of the IS1001 insertional element DNA sequence of the Bordetella parapertussis genome in nasopharyngeal specimens. This term was created for, but not limited in use to, BioFire Diagnostic FilmArray Respiratory Panel 2 assay, a multiplex PCR-based assay which uses melt curve analysis for the detection of various respiratory tract infection-causing pathogens.
Source: Regenstrief LOINC
Part Description
LP248336-2 Bordetella parapertussis IS1001
The repetitive insertion sequence targets pIS1001 and hIS1001 are present in multiple copies per genome of Bordetella parapertussis and B. holmesii, respectively. The "p" in pIS1001 is for parapertussis and "h" in hIS1001 is for holmesii. These targets along with other target sequences (e.g. IS481) are used to detect and differentiate between B. pertussis, B. parapertussis, B. holmesii and other Bordetella species.[PMID:21940464]
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Bordetella parapertussis IS1001 DNA
- Property
- PrThr
- Time
- Pt
- System
- Nph
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- B parap IS1001 DNA Nph Ql NAA+non-probe
- Display Name
- B. parapertussis IS1001 DNA NAA+non-probe Ql (Nph)
- Consumer Name Alpha
- Bordetella parapertussis IS1001, Nasopharynx
Example Answer List LL744-4
Source: Regenstrief Institute
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.73
- Change Reason
- Removed "p" from "pIS1001" in Component to better represent the name of this insertion sequence (IS) element present in various Bordetella species.
- Order vs. Observation
- Both
- Common US Lab Results Rank
- 2716
Member of these Panels
LOINC | Long Common Name |
---|---|
82159-5 | Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection |
Member of these Groups
LG50885-9 | Bordetella parapertussis IS1001 DNA| |
Language Variants Get Info
- zh-CNChinese (China)
- 副百日咳博德特菌 IS1001 DNA:
存在情况或阈值: 时间点: 鼻咽: 序数型: 非探针法.基因扩增.靶向 - fr-FRFrench (France)
- Bordetella parapertussis IS1001 ADN:
Présence/Seuil: Ponctuel: Nasopharynx: Qualitatif: Non-PCR amplification de cible - de-DEGerman (Germany)
- Bordetella parapertussis IS1001 DNA:
Nachweis oder Schwellenwert: Zeitpunkt: Nasopharynx: Ordinal: Zielfragmentamplifikation mit Detektion ohne Sonde - it-ITItalian (Italy)
- Bordetella parapertussis pIS1001 DNA:
PrThr: Pt: Nph: Ord: Non-sonda.amp.tar - es-MXSpanish (Mexico)
- ADN de Bordetella parapertussis IS1001:
Presencia o umbral: Punto temporal: Nasofaringe: Ordinal: Amplificación de ácidos nucleicos con detección sin sonda - es-ESSpanish (Spain)
- Bordetella parapertussis pIS1001 ADN:
PrThr: Punto temporal: Nasofaringe: Ord: Amplificación del objetivo no basado en sonda
LOINC FHIR® API Example - CodeSystem Request Get Info
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=87621-9
LOINC Copyright
Copyright © 2022 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright