LOINC
Version 2.72

88193-8Influenza virus A RNA [Presence] in Cornea or Conjunctiva by NAA with probe detectionActive

Part Descriptions

LP14239-5   Influenza virus A
Influenza viruses, from the family Orthomyxoviridae, are enveloped negative-strand RNA viruses with segmented genomes containing seven to eight gene segments. Of the five genera in the family, only influenza A virus (IAV), influenza B and C are medically relevant to humans. Aquatic birds harboring avian IAV are the likely natural reservoir for all known IAV subtypes and are probably the original source of all human pandemic IAV strains. IAV maintained in wild birds have been associated with stable host switch events to novel hosts, including most often to domestic poultry but also to horses, swine, toothed whales and humans. The influenza virus life cycle begins with the binding of viral HA to host cell receptors. Endocytosis and HA-mediated fusion of the viral and cellular membranes occurs. Viral ribonucleoprotein complexes are released into the cytoplasm, travel to the nucleus, then are replicated and transcribed by the viral polymerase complex. The new viruses are formed and bud when the newly formed ribonucleicprotein complexes and structural proteins reach the plasma membrane. Further research is needed to better understand how IAVs switch hosts and the viral genetic changes that underlie human adaptation. IAV causes respiratory infections in humans ranging from asymptomatic to fatal. Pandemics are attributed to "novel" viruses which possess a viral hemagglutinin (HA) to which humans do not have immunity. [PMID:20542248] [PMID:25812763]
Influenza viruses A and B are single-stranded RNA enveloped viruses belonging to the Orthomyxoviridae family. The symptoms of infection of Influenza A and B include fever, cough, sore throat, rhinorrhea, nasal congestion, headache, myalgia and malaise. Some patients may experience gastrointestinal symptoms including watery diarrhea, vomiting and abdominal pain. The influenza viruses spread rapidly in enclosed spaces with a documented rate of infection of 70% following a common source of exposure. Infection occurs in the respiratory epithelium in both the upper and lower respiratory tract, and the virus can be found in many specimen types, including nasal aspirates, nasal or nasopharyngeal swabs, throat swabs, sputum and tracheal aspirates. When infection rates reach epidemic proportions, hospitalization of children and elderly patients rises as does the mortality rates of elderly patients.(Manual of Clinical Microbiology, 11th edition, James H. Jorgensen; Karen C. Carroll; Guido Funke; Michael A Pfaller; Marie Louise Landry; Sandra S. Richter; David W. Warnock) Source: Regenstrief LOINC

LP264599-4   Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance. Source: Regenstrief LOINC

Fully-Specified Name

Component
Influenza virus A RNA
Property
PrThr
Time
Pt
System
Cornea/Conjunctiva
Scale
Ord
Method
Probe.amp.tar

Additional Names

Short Name
FLUAV RNA Corn/Cnjt Ql NAA+probe
Display Name
FLUAV RNA NAA+probe Ql (Corn/Cnjt)
Consumer Name Alpha
Influenza A (Flu A), Cornea or Conjunctiva

Example Answer List LL744-4

Source: Regenstrief Institute

Answer Code Score Answer ID
Detected LA11882-0
Not detected LA11883-8

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.63
Last Updated
Version 2.63
Order vs. Observation
Both

Member of these Panels

LOINC Long Common Name
90455-7 Influenza virus types A and B panel - Cornea or Conjunctiva by NAA with probe detection
88569-9 Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection

Member of these Groups

LG32757-3 Influenza virus

Language Variants Get Info

zh-CNChinese (China)
流感病毒 A 型 RNA:存在情况或阈值:时间点:角膜/结膜:序数型:探针法.基因扩增.靶向
fr-FRFrench (France)
Influenza virus A ARN:Présence/Seuil:Ponctuel:Cornée/conjonctive:Qualitatif:PCR amplification de cible
it-ITItalian (Italy)
Influenza A, virus RNA:PrThr:Pt:Cornea/Congiuntiva:Ord:Sonda.amp.tar
es-MXSpanish (Mexico)
ARN del virus de la influenza A:Presencia o umbral:Punto temporal:Córnea o conjuntiva:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
es-ESSpanish (Spain)
Virus Influenza A RNA:PrThr:Punto temporal:Cornea/conjuntiva:Ord:Sonda con amplificación dirigida

LOINC FHIR® API Example - CodeSystem Request Get Info

https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=88193-8