LOINC
Version 2.71

70867-7Rabies virus strain identified in Specimen by SequencingActive

Term Description

There is some regional variance of Rabies virus strains. These can be identified by amplification and sequencing for epidemiologic purposes, for example identifying a foreign strain that has been introduced to the US.
Source: Regenstrief LOINC

Part Description

LP150045-5   Sequencing
Sequencing is a method used to determine the sequence of individual genes, larger genetic regions (i.e. clusters of genes or operons), full chromosomes or entire genomes. Historically, most sequencing has been performed using the chain termination method developed by Frederick Sanger in 1977.[PMID:271968] Sequencing technologies have improved dramatically, making them cheaper, faster, and more accurate. Next-generation sequencing (NGS), also known as high-throughput sequencing, deep sequencing, and second-generation sequencing, is a type of technology that uses parallel sequencing of multiple small fragments of DNA to determine sequence. This "high-throughput" technology has increased the speed and amount of DNA sequenced at a significantly reduced cost.[PMID:18576944] Several NGS platforms (ie, sequencing instruments and associated reagents) have been developed. Third-generation sequencing is another methodology currently under development that uses parallel sequencing similar to NGS. In contrast to NGS, third-generation sequencing uses single DNA molecules rather than amplified DNA as a template.[PMID:20858600] Source: Regenstrief LOINC

Fully-Specified Name

Component
Rabies virus strain identified
Property
Prid
Time
Pt
System
XXX
Scale
Nom
Method
Sequencing

Additional Names

Short Name
RABV strain Spec Seq
Display Name
Rabies virus strain identified Sequencing Nom (Specimen)
Consumer Name Alpha
Rabies virus strain test, Specimen

Example Answer List LL2067-8

Source: Centers for Disease Control and Prevention

Answer Code Score Answer ID
California Skunk Rabies Virus variant LA18506-8
North Central Skunk Rabies Virus variant LA18507-6
South Central Skunk Rabies Virus variant LA18508-4
Arizona Gray Fox Rabies Virus variant LA18509-2
Texas Gray Fox Rabies Virus variant LA18510-0
Arctic Fox Rabies Virus variant LA18511-8
Raccoon Rabies Virus variant LA18512-6
Mongoose Rabies Virus variant LA18513-4
Canine Rabies Virus variant LA18514-2
Bat (not specified) Rabies Virus variant LA18515-9
Eptesicus fuscus Rabies Virus variant LA18516-7
Lasionycteris noctivagans Rabies Virus variant LA18517-5
Tadarida brasiliensis Rabies Virus variant LA18518-3
Parastrellus hesperus Rabies Virus variant LA18519-1
Perimyotis subflavus Rabies Virus variant LA18520-9
Lasiurus cinereus Rabies Virus variant LA18521-7
Lasiurus borealis Rabies Virus variant LA18522-5
Lasiurus seminolus Rabies Virus variant LA18523-3
Desmodus rotundus Rabies Virus variant LA18524-1
Myotis sp. Rabies Virus variant LA18525-8
Antrozous pallidus Rabies Virus Variant LA18526-6

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.40
Last Updated
Version 2.69
Change Reason
Changed method from Amplification/Sequencing because Amplification always occurs before sequencing
Order vs. Observation
Both

Member of these Groups

LG32755-7 Rabies virus

Language Variants Get Info

zh-CNChinese (China)
狂犬病病毒株 已鉴定的:存在与否或特征标识:时间点:XXX:名义型:序列测定
nl-NLDutch (Netherlands)
rabiësvirus stam geïdentificeerd:identificator:moment:XXX:nominaal:sequencing
fr-FRFrench (France)
Rage virus souche identifiée:Identification:Ponctuel:Milieux divers:Résultat nominal:Séquençage
it-ITItalian (Italy)
Rabbia, ceppo virus , identificato:Prid:Pt:XXX:Nom:Sequenziamento
pt-BRPortuguese (Brazil)
Identificação da cêpa do vírus da Raiva:Ident:Pt:XXX:Nom:Sequenciamento
es-ESSpanish (Spain)
Cepa del virus de la rabia identificado:Presencia o identidad:Punto temporal:XXX:Nom:Secuenciación
tr-TRTurkish (Turkey)
Kuduz virüsü suşu tanımlanmış:MevcKimlik:Zmlı:XXX:Snf:Sekanslama

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https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=70867-7