Version 2.78

96503-8 Adenovirus DNA [Presence] in Respiratory system specimen by NAA with probe detection

Part Descriptions

LP14061-3   Adenovirus
Adenoviruses, medium-sized (90-100 nm), non-enveloped icosohedral viruses with double-stranded DNA, have over 50 immunologically distinct types that cause infections in humans. Adenoviruses usually cause respiratory illness with symptoms ranging from the common cold to pneumonia, croup, and bronchitis. Adenoviruses can cause other illnesses such as gastroenteritis, conjunctivitis, cystitis, and less commonly, neurological disease. Infants and individuals with weakened immune systems are at high risk for severe complications of adenovirus infection and adenoviruses commonly cause acute respiratory illness in military recruits. Some asymptomatic people infected with adenoviruses have ongoing infections in their tonsils, adenoids, and intestines and can shed the virus for months or years. The virus can persist outside the body for long periods. Adenovirus infections can be detected using antigen detection, polymerase chain reaction assay, virus isolation, and serology. Typing is usually done by hemagglutination-inhibition and/or neutralization with type-specific antisera or by molecular methods. As of October 2014 there is no adenovirus vaccine for the general public, however an oral vaccine against types 4 and 7 was approved by the U.S. Food and Drug Administration in March 2011 for U.S. military personnel. The vaccine is recommended by the U.S. Department of Defense for military recruits entering basic training in order to prevent acute respiratory disease. Most adenovirus infections are mild and typically require only treatment of symptoms. Source: Centers for Disease Control and Prevention, CDC: Adenovirus

Fully-Specified Name

Component
Adenovirus DNA
Property
PrThr
Time
Pt
System
Respiratory System Specimen
Scale
Ord
Method
Probe.amp.tar

Additional Names

Short Name
HAdV DNA Resp Ql NAA+probe
Display Name
Adenovirus DNA NAA+probe Ql (Respiratory system specimen)
Consumer Name Alpha Get Info
Adenovirus, Respiratory system specimen

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.69
Last Updated
Version 2.75
Change Reason
Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
Order vs. Observation
Both

Example Answer List LL360-9

Answer Code Score Answer ID
Positive Copyright http://snomed.info/sct ID:10828004 Positive (qualifier value) LA6576-8
Negative Copyright http://snomed.info/sct ID:260385009 Negative (qualifier value) LA6577-6

Member of these Panels

LOINC Long Common Name
101474-5 Adenovirus DNA and Human Metapneumovirus and Rhinovirus RNA panel - Respiratory specimen by NAA with probe detection
92143-7 Respiratory pathogens DNA and RNA panel - Respiratory system specimen by NAA with probe detection
94499-1 Respiratory viral pathogens DNA and RNA panel - Respiratory system specimen Qualitative by NAA with probe detection

Member of these Groups Get Info

LOINC Group Group Name
LG34060-0 Adenovirus DNA|PrThr|Sys:ANYResp

Language Variants Get Info

Tag Language Translation
de-DE German (Germany) Adenovirus DNA:Nachweis oder Schwellenwert:Zeitpunkt:Probenmaterial vom Respirationstrakt:Ordinal:Zielfragmentamplifikation mit Sondendetektion
es-ES Spanish (Spain) Adenovirus ADN:PrThr:Punto temporal:Muestra del sistema respiratorio:Ord:Sonda con amplificación dirigida
Synonyms: Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio
es-MX Spanish (Mexico) ADN de adenovirus:Presencia o umbral:Punto temporal:Espécimen respiratorio:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-CA French (Canada) Adénovirus, ADN:Présence-Seuil:Temps ponctuel:Échantillon du système respiratoire:Ordinal:Sonde avec amplification de la cible
fr-FR French (France) Adénovirus ADN:Présence/Seuil:Ponctuel:Échantillon du système respiratoire:Qualitatif:PCR amplification de cible
it-IT Italian (Italy) Adenovirus DNA:PrThr:Pt:Campione da Sistema Respiratorio:Ord:Sonda.amp.tar
Synonyms: Campione da Apparato Respiratorio Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NL Dutch (Netherlands) Adenovirus DNA:aanwezigheid:moment:respiratoir monster:ordinaal:probe-detectie
Synonyms: probe.amp.tar systema respiratorium; ademhalingsstelsel
zh-CN Chinese (China) 腺病毒 DNA:存在情况或阈值:时间点:呼吸系统标本:序数型:探针法.基因扩增.靶向
Synonyms: AdV;AV;腙样病毒;腺样病毒 供检查用的材料;待检物;待试验物;样品;样本;试料;试样 依次型;分类顺序型;定性的;序数型(或称等级型);性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸(Deoxyribonucleic acid,DNA) 受检物 呼吸道标本(样品、样本);呼吸系统标本(样品、样本) 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况(存在、存在与否、是否存在)或阈值(界值、界限、阀值、临界值) 微生物学;微生物学试验;微生物学试验(培养、DNA、抗原及抗体) 扩增型 扩增性 时刻;随机;随意;瞬间 样品 样本 经过扩增的 脱氧核糖核酸探针 试样

92134-6 Human metapneumovirus RNA [Presence] in Respiratory system specimen by NAA with probe detection

Part Descriptions

LP34982-6   Human metapneumovirus
Human metapneumovirus (hMPV) is a Paramyxoviridae family virus that causes upper and lower respiratory tract infections in the very young, elderly and those with compromised immune systems. hMPV can vary in its size, shape and staining properties, and shares similar structure with avian pneumovirus (aMPV) and human respiratory syncytial virus (hRSV). Typically, molecular testing methods, like reverse transcriptase PCR (RT-PCR), are used to detect hMPV. hMPV is thought to be responsible for about 5% to 10% of pediatric hospitalizations of those suffering from acute respiratory tract infection. PMID: 24841931 Source: Regenstrief LOINC

Fully-Specified Name

Component
Human metapneumovirus RNA
Property
PrThr
Time
Pt
System
Respiratory System Specimen
Scale
Ord
Method
Probe.amp.tar

Additional Names

Short Name
hMPV RNA Resp Ql NAA+probe
Display Name
hMPV RNA NAA+probe Ql (Respiratory system specimen)
Consumer Name Alpha Get Info
Human metapneumovirus, Respiratory system specimen

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.66
Last Updated
Version 2.75
Change Reason
Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
Order vs. Observation
Both

Example Answer List LL360-9

Answer Code Score Answer ID
Positive Copyright http://snomed.info/sct ID:10828004 Positive (qualifier value) LA6576-8
Negative Copyright http://snomed.info/sct ID:260385009 Negative (qualifier value) LA6577-6

Member of these Panels

LOINC Long Common Name
101474-5 Adenovirus DNA and Human Metapneumovirus and Rhinovirus RNA panel - Respiratory specimen by NAA with probe detection
92143-7 Respiratory pathogens DNA and RNA panel - Respiratory system specimen by NAA with probe detection
94499-1 Respiratory viral pathogens DNA and RNA panel - Respiratory system specimen Qualitative by NAA with probe detection

Member of these Groups Get Info

LOINC Group Group Name
LG34090-7 Human metapneumovirus RNA|PrThr|Sys:ANYResp

Language Variants Get Info

Tag Language Translation
es-MX Spanish (Mexico) ARN del metaneumovirus humano:Presencia o umbral:Punto temporal:Espécimen respiratorio:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
es-ES Spanish (Spain) Metaneumovirus humano RNA:PrThr:Punto temporal:Muestra del sistema respiratorio:Ord:Sonda con amplificación dirigida
Synonyms: Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio
fr-CA French (Canada) Métapneumovirus humain ARN:Présence-Seuil:Temps ponctuel:Échantillon du système respiratoire:Ordinal:Sonde avec amplification de la cible
fr-FR French (France) Métapneumovirus humain ARN:Présence/Seuil:Ponctuel:Échantillon du système respiratoire:Qualitatif:PCR amplification de cible
it-IT Italian (Italy) Metapneumovirus umano RNA:PrThr:Pt:Campione da Sistema Respiratorio:Ord:Sonda.amp.tar
Synonyms: Campione da Apparato Respiratorio Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NL Dutch (Netherlands) Humaan metapneumovirus RNA:aanwezigheid:moment:respiratoir monster:ordinaal:probe-detectie
Synonyms: probe.amp.tar systema respiratorium; ademhalingsstelsel
zh-CN Chinese (China) 人类偏肺病毒 RNA:存在情况或阈值:时间点:呼吸系统标本:序数型:探针法.基因扩增.靶向
Synonyms: hMPV RNA hMPV;人中间肺炎病毒;人类间肺病毒;人类间质肺病毒;偏肺病毒肺炎 人中间肺炎病毒 RNA 人类偏肺病毒 RNA 人类间质肺病毒 RNA 供检查用的材料;待检物;待试验物;样品;样本;试料;试样 依次型;分类顺序型;定性的;序数型(或称等级型);性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 受检物 呼吸道标本(样品、样本);呼吸系统标本(样品、样本) 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况(存在、存在与否、是否存在)或阈值(界值、界限、阀值、临界值) 微生物学;微生物学试验;微生物学试验(培养、DNA、抗原及抗体) 扩增型 扩增性 时刻;随机;随意;瞬间 样品 样本 核糖核酸;Ribonucleic acid 经过扩增的 脱氧核糖核酸探针 试样

92130-4 Rhinovirus RNA [Presence] in Respiratory system specimen by NAA with probe detection

Part Descriptions

LP17714-4   Rhinovirus
Human rhinoviruses (HRVs) can be categorized into three genetically distinct HRV groups, designated groups A, B, and C, within the genus Enterovirus and the family Picornaviridae. HRVs are positive-sense, single-stranded-RNA (ssRNA) viruses of approximately 7,200 bp. HRVs, which are the cause of more than one-half of cold like illnesses, are commonly associated with upper respiratory tract infection, otitis media, and sinusitis. PCR testing for respiratory virus detection has led to the recognition of HRV as a lower respiratory tract pathogen as well, especially in patients with asthma, infants, elderly patients, and immunocompromised individuals. At this time there are no approved antiviral therapies, and treatment is primarily supportive. Source: Regenstrief LOINC, PMCID: PMC3553670

Fully-Specified Name

Component
Rhinovirus RNA
Property
PrThr
Time
Pt
System
Respiratory System Specimen
Scale
Ord
Method
Probe.amp.tar

Additional Names

Short Name
Rhinovirus RNA Resp Ql NAA+probe
Display Name
Rhinovirus RNA NAA+probe Ql (Respiratory system specimen)
Consumer Name Alpha Get Info
Rhinovirus, Respiratory system specimen

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.66
Last Updated
Version 2.75
Change Reason
Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
Order vs. Observation
Both

Example Answer List LL360-9

Answer Code Score Answer ID
Positive Copyright http://snomed.info/sct ID:10828004 Positive (qualifier value) LA6576-8
Negative Copyright http://snomed.info/sct ID:260385009 Negative (qualifier value) LA6577-6

Member of these Panels

LOINC Long Common Name
101474-5 Adenovirus DNA and Human Metapneumovirus and Rhinovirus RNA panel - Respiratory specimen by NAA with probe detection
92143-7 Respiratory pathogens DNA and RNA panel - Respiratory system specimen by NAA with probe detection
94499-1 Respiratory viral pathogens DNA and RNA panel - Respiratory system specimen Qualitative by NAA with probe detection

Member of these Groups Get Info

LOINC Group Group Name
LG50139-1 Rhinovirus RNA|PrThr|Sys:ANYResp

Language Variants Get Info

Tag Language Translation
es-ES Spanish (Spain) Rinovirus RNA:PrThr:Punto temporal:Muestra del sistema respiratorio:Ord:Sonda con amplificación dirigida
Synonyms: Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio
es-MX Spanish (Mexico) ARN de rinovirus:Presencia o umbral:Punto temporal:Espécimen respiratorio:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-CA French (Canada) Rhinovirus ARN:Présence-Seuil:Temps ponctuel:Échantillon du système respiratoire:Ordinal:Sonde avec amplification de la cible
fr-FR French (France) Rhinovirus ARN:Présence/Seuil:Ponctuel:Échantillon du système respiratoire:Qualitatif:PCR amplification de cible
it-IT Italian (Italy) Rhinovirus RNA:PrThr:Pt:Campione da Sistema Respiratorio:Ord:Sonda.amp.tar
Synonyms: Campione da Apparato Respiratorio Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NL Dutch (Netherlands) rinovirus RNA:aanwezigheid:moment:respiratoir monster:ordinaal:probe-detectie
Synonyms: probe.amp.tar rhinovirus systema respiratorium; ademhalingsstelsel
zh-CN Chinese (China) 鼻病毒 RNA:存在情况或阈值:时间点:呼吸系统标本:序数型:探针法.基因扩增.靶向
Synonyms: RHV RNA RHV;感冒病毒 供检查用的材料;待检物;待试验物;样品;样本;试料;试样 依次型;分类顺序型;定性的;序数型(或称等级型);性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 受检物 呼吸道标本(样品、样本);呼吸系统标本(样品、样本) 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况(存在、存在与否、是否存在)或阈值(界值、界限、阀值、临界值) 微生物学;微生物学试验;微生物学试验(培养、DNA、抗原及抗体) 扩增型 扩增性 时刻;随机;随意;瞬间 样品 样本 核糖核酸;Ribonucleic acid 经过扩增的 脱氧核糖核酸探针 试样