33764-2

Shiga toxin stx gene [Identifier] in Specimen by NAA with probe detection

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Term Description

This term is used to report the detection of genes that encode Shiga toxin (produced by Shigella dysenteriae serotype 1) or Shiga-like toxin (produced by Escherichia coli, including E. coli O157:H7). To report the result of an assay that only detects Shiga-like toxin genes (and not Shiga toxin gene), use a LOINC code with a Component specific for Shiga-like toxin gene(s), such as LOINC 81285-9.

Part Description

LP31503-3 Shiga toxin stx gene
Shiga toxins are a family of related toxins with two major groups, Stx1 and Stx2, expressed by genes considered to be part of the genome of lambdoid prophages. True Shiga toxin (Stx) is produced by Shigella dysenteriae. (Shiga-like toxins 1 and 2 (SLT-1 and 2 or Stx-1 and 2) are the Shiga toxins produced by some E. coli strains.) [Wikipedia: Shiga toxin] Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details. Source: Wikipedia, Shiga toxin

LOINC Names Get Info

Fully-Specified Name: Shiga toxin stx gene:Prid:Pt:XXX:Nom:Probe.amp.tar
Long Common Name: Shiga toxin stx gene [Identifier] in Specimen by NAA with probe detection
Short Name: Shiga toxin stx gene Spec NAA+probe
Display Name: Shiga toxin stx gene NAA+probe Nom (Specimen)
Consumer Name Alpha Get Info: Shiga toxin stx gene, Specimen

Part Model Get Info

Component
Shiga toxin stx gene
LP31503-3
- Analyte
  Shiga toxin stx gene
  LP31503-3
  - Component Numerator
    Shiga toxin stx gene
    LP31503-3
    - Component Numerator Core
      Shiga toxin stx gene
      LP31503-3
    - Component Numerator Core Suffix
      NULL
  - Component Denominator
    NULL
    - Component Denominator Core
      NULL
    - Component Denominator Core Suffix
      NULL
- Challenge
  NULL
- Adjustment
  NULL
- Count
  NULL
Property
Prid
LP6850-4
Time
Pt
LP6960-1
- Time Core
  Pt
  LP6960-1
- Time Modifier
  NULL
System
XXX
LP7735-6
- System Core
  XXX
  LP7735-6
- Super System
  NULL
Scale
Nom
LP7750-5
Method
Probe.amp.tar
LP6464-4

Example Answer List: LL1498-6

Source: Regenstrief LOINC

Answer	Code	Score	Answer ID
NegativeCopyright http://snomed.info/sct ID:260385009 Negative (qualifier value)			LA6577-6
Shiga toxin 1			LA16137-4
Shiga toxin 2			LA16138-2
Shiga toxin 1+2			LA16139-0

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.09
Last Updated: Version 2.73 (MIN)
Change Reason: Removed parentheses around the gene name in Component part name based on the current LOINC model.
Order vs. Observation: Both
Common Test Rank Get Info: 9761

Language Variants Get Info

Tag	Language	Translation
cs-CZ	Czech (Czechia)	Shiga toxin gen stx:Přítomnost nebo identita:Časový bod:XXX:Nominální:Amplifikace nukleových kyselin s detekcí sondou
el-GR	Greek (Greece)	Γονίδιο stx τοξίνης Shiga:Prid:Pt:XXX:Nom:Ανιχνευτής.ενίσχυση.στόχου Synonyms: MICRO Nom Prid Pt XXX Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Γονίδιο Γονίδιο stx τοξίνης Shiga
es-AR	Spanish (Argentina)	gen STX:presencia o identidad:punto en el tiempo:XXX:Nominal:sonda.amplificación.blanco
es-ES	Spanish (Spain)	Gen toxina Shiga (stx):Presencia o identidad:Punto temporal:XXX:Nom:Sonda con amplificación dirigida
es-MX	Spanish (Mexico)	Gen stx de la toxina Shiga:Presencia o identidad:Punto temporal:XXX:Nominal:Amplificación de ácidos nucleicos con detección de sonda
fr-CA	French (Canada)	Toxine de Shiga gène stx:Présence ou identité:Temps ponctuel:XXX:Nominal:Sonde avec amplification de la cible
fr-FR	French (France)	Shiga-toxine gène stx:Identification:Ponctuel:Milieux divers:Résultat nominal:PCR amplification de cible
fr-BE	French (Belgium)	Gène STX:Présence ou identité:Temps ponctuel:XXX:Nominal:Sonde avec amplification de la cible
it-IT	Italian (Italy)	STX, gene:Prid:Pt:XXX:Nom:Sonda.amp.tar Synonyms: Gene STX (tossina di Shiga) Microbiologia Presenza o Identità Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
ko-KR	Korean (Korea, Republic Of)	STX 유전자:존재:검사시점:XXX:명칭결과:DNA 탐색자.증폭.표적
nl-NL	Dutch (Netherlands)	STX-gen:identificator:moment:XXX:nominaal:probe-detectie Synonyms: probe.amp.tar STX gen
pl-PL	Polish (Poland)	Toksyna Shiga stx gen:obecność lub identyfikacja:punkt w czasie:XXX:skala nominalna:sonda.amplifikacja.cel Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Gen toksyny Shiga stx wynik kategorialny
pt-BR	Portuguese (Brazil)	STX gene:Ident:Pt:XXX:Nom:Sonda com limite de detecção da amplificação de alvo Synonyms: ; Shiga toxin gene; Identity or presence; Point in time; Random; Misc; Miscellaneous; Unspecified; Other; Nominal; PCR; Polymerase chain reaction; Transcription mediated amplification; NASBA; Nucleic acid sequence based analysis; SDA; Strand Displacement Amplification; LAT; Ligation-activated transcription; 3SR SR; 3 Self-Sustaining Sequence Replication; LCR; Ligase chain reaction; QBR; Q-Beta Replicase or probe amplification category method; Probe with target amplification; NAAT; TMA; Amp Prb; Probe with ampification; DNA probe; Amplified; Microbiology
ru-RU	Russian (Russian Federation)	STX ген:ПрИд:ТчкВрм:XXX:Ном:Проба.усил.миш Synonyms: STX (Shiga токсин) ген ДНК проба;ДНК зонд Номинальный;Именной Присутствие или Идентификация Проба с мишени усилением Точка во времени;Момент
tr-TR	Turkish (Turkey)	STX geni:MevcKimlik:Zmlı:XXX:Snf:Prob.amf.hdf
zh-CN	Chinese (China)	志贺样毒素 stx 基因:存在与否或特征标识:时间点:XXX:名义型:探针法.基因扩增.靶向 Synonyms: STX 基因;志贺样毒素（Shiga Toxin，STX）不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向分类型应答;分类型结果;名义性;名称型;名词型;名词性;标称性;没有自然次序的名义型或分类型应答存在;存在与否;特征标识;身份;身份标识微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间经过扩增的脱氧核糖核酸探针遗传基因;遗传因子;吉恩;生物基因

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LOINC Copyright

Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.