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Status Information

Status
DEPRECATED
Reason
Duplicate
Comment
The "Probe.mag capture" Method has been deprecated and replaced with the more general "Probe" Method since the "mag capture" portion represents how the nucleic acids are isolated, which is not a distinction made in the LOINC Method for molecular tests. Given that updating the Method would change the meaning of the term, a new term was created to replace the existing term as recommended by the Special Topics workgroup on PCR-based Methods and approved by the LOINC Lab Committee at the June 2017 meeting.
Map-ToLong Common NameMapping Guidance
88259-7Gram negative bacteria identified [Interpretation] by Probe in Positive blood culture

Term Description

Gram-negative (GN) bacteria identified in positive blood cultures. This term was created for, but not limited in use to, Nanosphere's Verigene Gram-Negative Blood Culture test (BC-GN), which uses microarray analysis with probe to identify gram-negative bacteria, including Acinetobacter sp, Citrobacter sp, Enterobacter sp, Proteus sp, Escherichia coli, Klebsiella pneumoniae, Klebsiella oxytoca, and Pseudomonas aeruginosa, as well as the six antibiotic resistance gene markers: CTX-M, KPC, NDM, VIM, IMP, OXA.

Part Description

LP183540-6   Probe.mag capture
Nucleic acid is first concentrated and purified using a bead-based method, followed by a oligonucleotide probe detection of sequence of interest with signal enhancement. Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name
Gram negative bacteria identified:Imp:Pt:Bld.pos growth:Nom:Probe.mag capture
Long Common Name
Deprecated Gram negative bacteria identified [Interpretation] by Nucleic acid capture and probe detection in Positive blood culture
Short Name
Deprecated GN bact Bld Pos Prb Mag-Imp
Display Name
Gram negative bacteria identified Nucleic acid capture and probe detection (Pos bld culture) [Interp]
Consumer Name Alpha Get Info
Gram negative bacteria test, Infected blood

Part Model Get Info

  • Component
    Gram negative bacteria identified
    LP183759-2
    • Analyte
      Gram negative bacteria identified
      LP183759-2
      • Component Numerator
        Gram negative bacteria identified
        LP183759-2
        • Component Numerator Core
          Gram negative bacteria
          LP183758-4
        • Component Numerator Core Suffix
          identified
          LP29257-0
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    Imp
    LP6819-9
  • Time
    Pt
    LP6960-1
  • System
    Bld.pos growth
    LP183539-8
    • System Core
      Bld.pos growth
      LP183539-8
    • Super System
      NULL
       
  • Scale
    Nom
    LP7750-5
  • Method
    Probe.mag capture
    LP183540-6

Example Answer List: LL3025-5

Source: Nanosphere
AnswerCodeScoreAnswer ID
Acinetobacter species.rpsA geneLA21499-1
Citrobacter species.ompA and mrkC genesLA21500-6
Enterobacter species.gyrB and metB genesLA21501-4
Proteus species.atpD geneLA21502-2
Escherichia coli.oppA geneLA21503-0
Klebsiella pneumoniae.yggE geneLA21494-2
Klebsiella oxytoca.ompA geneLA21496-7
Pseudomonas aeruginosa.sodA geneLA21498-3
Acinetobacter speciesLA21489-2
Citrobacter speciesLA21490-0
Enterobacter speciesLA21491-8
Proteus speciesLA21492-6
Escherichia coliCopyright http://snomed.info/sct ID:112283007 Escherichia coli (organism)LA21335-7
Klebsiella pneumoniaeLA21336-5
Klebsiella oxytocaLA21495-9
Pseudomonas aeruginosaLA19340-1
No organisms found that can be detected by panelLA20994-2

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.50
Last Updated
Version 2.63 (DEL)
Order vs. Observation
Observation

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Bakterie gramnegativní identifikované:Interpretace:Časový bod:Krev pozitivní kultivace:Nominální:Hybridizace s magnetickým záchytem
el-GRGreek (Greece)Gram αρνητικά βακτήρια αναγνωρισθέν:Imp:Pt:Αίμα.θετική ανάπτυξη:Nom:Ανιχνευτής.μαγνητική σύλληψη
Synonyms: Gram αρνητικά βακτήρια Imp MICRO Nom Pt Αίμα Αίμα.θετική ανάπτυξη αναγνωρισθέν Ανιχνευτής Ανιχνευτής.μαγνητική σύλληψη Βακτήριο
es-ESSpanish (Spain)Bacteria Gram negativa identificado:Impresión/interpretación del estudio:Punto temporal:Sangre crecimiento positivo:Nom:Hibridación por capturas magnéticas
es-MXSpanish (Mexico)Bacterias Gram negativas identificadas:Impresión / interpretación del estudio:Punto temporal:Hemocultivo positivo:Nominal:Hibridación de captura magnética
fr-FRFrench (France)Bactérie Gram négatif identifiée:Interprétation:Ponctuel:Hémoculture positive:Résultat textuel:Sonde de capture magnétique
it-ITItalian (Italy)Batteri Gram-negativi, identificato:Imp:Pt:Emocolture positive:Nom:Sonda.cattura mag
Synonyms: Ibridizzazione cattura magnetica Impressione/interpretazione di studio Microbiologia Punto nel tempo (episodio) Sangue Sonda di DNA
zh-CNChinese (China)革兰氏阴性细菌 已鉴定的:印象:时间点:血液.生长阳性:名义型:探针.磁捕获
Synonyms: Neg 不存在的 分离出的;分离的;已分离的;检出的;经分离的;经过分离的;经过鉴定的;经鉴定的;鉴定的 分类型应答;分类型结果;名义性;名称型;名词型;名词性;标称性;没有自然次序的名义型或分类型应答 印象是一种诊断陈述，始终是对其他某种观察指标的解释或抽象（一系列检验项目结果、一幅图像或者整个某位病人），而且几乎总是由某位专业人员产生。;检查印象;检查印象/解释;检查的印象/解释;检查解释;解释;阐释 反面的 否定的 否认的 已明确的细菌 已确认的细菌 已鉴别的细菌 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 时刻;随机;随意;瞬间 消极的 磁捕获杂交法;磁性捕获杂交法;磁力捕获杂交法;Magnetic capture hybridization 细菌类;菌 经明确的细菌 经确认的细菌 经鉴别的细菌 经鉴定的细菌 脱氧核糖核酸探针 血;血液 血液.阳性生长;血培养阳性;阳性血培养;阳性血液培养;全血.生长阳性 负性的 负的 负面的 阴 阴性（Negative，Neg） 革兰阴性细菌;G-细菌;革兰氏阴性菌;革兰阴性菌;阴性菌

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=75688-2