76585-9
Wound microorganism gene identification panel by NAA with probe detection
Active
76583-4 Klebsiella pneumoniae phoE gene [Presence] in Swab specimen by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185688-1 Klebsiella pneumoniae phoE gene
Klebsiella pneumoniae is a common pathogen in hospital-acquired respiratory infections and antibiotic-resistant strains of K pneumoniae have been identified in local outbreaks. This microorganism has several porins in its outer membrane that regulate the entry of antibiotics into the cell, one of which is phosphate-regulated PhoE. PhoE is encoded by the gene phoE and the expression of this porin has been associated with antibiotic resistance. Detection of the phoE gene in a clinical specimen can identify K pneumoniae as one of the pathogens responsible for infection. PMID: 17005822
Source: Regenstrief LOINC, PMID: 17005822
Fully-Specified Name
- Component
- Klebsiella pneumoniae phoE gene
- Property
- PrThr
- Time
- Pt
- System
- XXX.swab
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- Kl pneum phoE Swab Ql NAA+probe
- Display Name
- K. pneumoniae phoE gene NAA+probe Ql (Swab specimen)
- Consumer Name Alpha Get Info
- Klebsiella pneumoniae phoE gene, Swab specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.71
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Observation
Example Answer List LL2994-3
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Low (< 10^5 bacteria) | LA21375-3 | ||
| Medium (10^5-10^7 bacteria) | LA21374-6 | ||
| High (> 10^7 bacteria) | LA21373-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Klebsiella pneumoniae phoE-Gen: |
| es-ES | Spanish (Spain) | gen phoE Klebsiella pneumoniae: |
| es-MX | Spanish (Mexico) | Gen phoE de Klebsiella pneumoniae: |
| fr-FR | French (France) | Klebsiella pneumoniae phoE gène: |
| it-IT | Italian (Italy) | Klebsiella pneumoniae phoE, gene: Synonyms: Gene Klebsiella pneumoniae phoE Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Klebsiella pneumoniae phoE geni: Synonyms: Mevcut |
| zh-CN | Chinese (China) | 肺炎克雷伯菌 phoE 基因: Synonyms: XXX.拭子（拭样、 |
76598-2 Klebsiella pneumoniae phoE gene [#/mass] in XXX.tissue by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185688-1 Klebsiella pneumoniae phoE gene
Klebsiella pneumoniae is a common pathogen in hospital-acquired respiratory infections and antibiotic-resistant strains of K pneumoniae have been identified in local outbreaks. This microorganism has several porins in its outer membrane that regulate the entry of antibiotics into the cell, one of which is phosphate-regulated PhoE. PhoE is encoded by the gene phoE and the expression of this porin has been associated with antibiotic resistance. Detection of the phoE gene in a clinical specimen can identify K pneumoniae as one of the pathogens responsible for infection. PMID: 17005822
Source: Regenstrief LOINC, PMID: 17005822
Fully-Specified Name
- Component
- Klebsiella pneumoniae phoE gene
- Property
- NCnt
- Time
- Pt
- System
- XXX.tissue
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- Kl pneum phoE XXX.tiss NAA+probe
- Display Name
- K. pneumoniae phoE gene NAA+probe (Unsp tissue) [#/Mass]
- Consumer Name Alpha Get Info
- Klebsiella pneumoniae phoE gene, Unspecified tissue
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Klebsiella pneumoniae phoE-Gen: |
| es-ES | Spanish (Spain) | gen phoE Klebsiella pneumoniae: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Gen phoE de Klebsiella pneumoniae: |
| fr-FR | French (France) | Klebsiella pneumoniae phoE gène: |
| it-IT | Italian (Italy) | Klebsiella pneumoniae phoE, gene: Synonyms: Contenuto Numerico Gene Klebsiella pneumoniae phoE Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Tessuto |
| tr-TR | Turkish (Turkey) | Klebsiella pneumoniae phoE geni: |
| zh-CN | Chinese (China) | 肺炎克雷伯菌 phoE 基因: Synonyms: 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/g | Example UCUM Units |
76611-3 Klebsiella pneumoniae phoE gene [#/volume] in XXX.body fluid by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185688-1 Klebsiella pneumoniae phoE gene
Klebsiella pneumoniae is a common pathogen in hospital-acquired respiratory infections and antibiotic-resistant strains of K pneumoniae have been identified in local outbreaks. This microorganism has several porins in its outer membrane that regulate the entry of antibiotics into the cell, one of which is phosphate-regulated PhoE. PhoE is encoded by the gene phoE and the expression of this porin has been associated with antibiotic resistance. Detection of the phoE gene in a clinical specimen can identify K pneumoniae as one of the pathogens responsible for infection. PMID: 17005822
Source: Regenstrief LOINC, PMID: 17005822
Fully-Specified Name
- Component
- Klebsiella pneumoniae phoE gene
- Property
- NCnc
- Time
- Pt
- System
- XXX.body fluid
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- Kl pneum phoE # XXX.body fld NAA+probe
- Display Name
- K. pneumoniae phoE gene NAA+probe (Unsp body fluid) [#/Vol]
- Consumer Name Alpha Get Info
- Klebsiella pneumoniae phoE gene, Unspecified body fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Klebsiella pneumoniae phoE-Gen: |
| es-ES | Spanish (Spain) | gen phoE Klebsiella pneumoniae: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Gen phoE de Klebsiella pneumoniae: |
| fr-FR | French (France) | Klebsiella pneumoniae phoE gène: |
| it-IT | Italian (Italy) | Klebsiella pneumoniae phoE, gene: Synonyms: Concentrazione Numerica Gene Klebsiella pneumoniae phoE Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Klebsiella pneumoniae phoE geni: |
| zh-CN | Chinese (China) | 肺炎克雷伯菌 phoE 基因: Synonyms: 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/mL | Example UCUM Units |
76582-6 Streptococcus agalactiae cfb gene [Presence] in Swab specimen by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185687-3 Streptococcus agalactiae cfb gene
Streptococcus agalactiae (group B Streptococcus) is one of the primary causes of sepsis and neonatal meningitis and has also been associated with infections in immunosuppressed patients. All S agalactiae contain the cfb gene, which encodes CAMP factor, one of the proteins responsible for the organism's virulence. Detection of the cfb gene in clinical specimens can help identify S agalactiae as the infectious agent. PMID: 22407941
Source: Regenstrief LOINC, PMID: 22407941
Fully-Specified Name
- Component
- Streptococcus agalactiae cfb gene
- Property
- PrThr
- Time
- Pt
- System
- XXX.swab
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- S agalact cfb Swab Ql NAA+probe
- Display Name
- S. agalactiae cfb gene NAA+probe Ql (Swab specimen)
- Consumer Name Alpha Get Info
- Streptococcus agalactiae cfb gene, Swab specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.71
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Observation
Example Answer List LL2994-3
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Low (< 10^5 bacteria) | LA21375-3 | ||
| Medium (10^5-10^7 bacteria) | LA21374-6 | ||
| High (> 10^7 bacteria) | LA21373-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Streptococcus agalactiae cfb-Gen: |
| es-ES | Spanish (Spain) | gen cfb Streptococcus agalactiae: |
| es-MX | Spanish (Mexico) | Gen cfb de Streptococo agalactiae: |
| fr-FR | French (France) | Streptococcus agalactiae cfb gène: |
| it-IT | Italian (Italy) | Streptococcus agalactiae, gene cfb: Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Streptococcus agalactiae cfb geni: Synonyms: Mevcut |
| zh-CN | Chinese (China) | 无乳链球菌 cfb 基因: Synonyms: B 族链球菌; |
76597-4 Streptococcus agalactiae cfb gene [#/mass] in XXX.tissue by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185687-3 Streptococcus agalactiae cfb gene
Streptococcus agalactiae (group B Streptococcus) is one of the primary causes of sepsis and neonatal meningitis and has also been associated with infections in immunosuppressed patients. All S agalactiae contain the cfb gene, which encodes CAMP factor, one of the proteins responsible for the organism's virulence. Detection of the cfb gene in clinical specimens can help identify S agalactiae as the infectious agent. PMID: 22407941
Source: Regenstrief LOINC, PMID: 22407941
Fully-Specified Name
- Component
- Streptococcus agalactiae cfb gene
- Property
- NCnt
- Time
- Pt
- System
- XXX.tissue
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- S agalact cfb XXX.tiss NAA+probe
- Display Name
- S. agalactiae cfb gene NAA+probe (Unsp tissue) [#/Mass]
- Consumer Name Alpha Get Info
- Streptococcus agalactiae cfb gene, Unspecified tissue
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Streptococcus agalactiae cfb-Gen: |
| es-ES | Spanish (Spain) | gen cfb Streptococcus agalactiae: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Gen cfb de Streptococo agalactiae: |
| fr-FR | French (France) | Streptococcus agalactiae cfb gène: |
| it-IT | Italian (Italy) | Streptococcus agalactiae, gene cfb: Synonyms: Contenuto Numerico Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Tessuto |
| tr-TR | Turkish (Turkey) | Streptococcus agalactiae cfb geni: |
| zh-CN | Chinese (China) | 无乳链球菌 cfb 基因: Synonyms: B 族链球菌; |
Example Units
| Unit | Source |
|---|---|
| {#}/g | Example UCUM Units |
76610-5 Streptococcus agalactiae cfb gene [#/volume] in XXX.body fluid by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185687-3 Streptococcus agalactiae cfb gene
Streptococcus agalactiae (group B Streptococcus) is one of the primary causes of sepsis and neonatal meningitis and has also been associated with infections in immunosuppressed patients. All S agalactiae contain the cfb gene, which encodes CAMP factor, one of the proteins responsible for the organism's virulence. Detection of the cfb gene in clinical specimens can help identify S agalactiae as the infectious agent. PMID: 22407941
Source: Regenstrief LOINC, PMID: 22407941
Fully-Specified Name
- Component
- Streptococcus agalactiae cfb gene
- Property
- NCnc
- Time
- Pt
- System
- XXX.body fluid
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- S agalact cfb # XXX.body fld NAA+probe
- Display Name
- S. agalactiae cfb gene NAA+probe (Unsp body fluid) [#/Vol]
- Consumer Name Alpha Get Info
- Streptococcus agalactiae cfb gene, Unspecified body fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Streptococcus agalactiae cfb-Gen: |
| es-ES | Spanish (Spain) | gen cfb Streptococcus agalactiae: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Gen cfb de Streptococo agalactiae: |
| fr-FR | French (France) | Streptococcus agalactiae cfb gène: |
| it-IT | Italian (Italy) | Streptococcus agalactiae, gene cfb: Synonyms: Concentrazione Numerica Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Streptococcus agalactiae cfb geni: |
| zh-CN | Chinese (China) | 无乳链球菌 cfb 基因: Synonyms: B 族链球菌; |
Example Units
| Unit | Source |
|---|---|
| {#}/mL | Example UCUM Units |
76581-8 Streptococcus pyogenes csrS gene [Presence] in Swab specimen by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185686-5 Streptococcus pyogenes csrS gene
Streptococcus pyogenes is an important cause of pharyngitis as well as more severe infections, including sepsis and toxic shock syndrome. The csrS gene is associated with S pyogenes virulence, and therefore, its presence in clinical specimens can be used to identify this organism as one of the pathogens responsible for a specific infection. PMID: 21371090
Source: Regenstrief LOINC, PMID: 21371090
Fully-Specified Name
- Component
- Streptococcus pyogenes csrS gene
- Property
- PrThr
- Time
- Pt
- System
- XXX.swab
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- S pyogenes csrS Swab Ql NAA+probe
- Display Name
- S. pyogenes csrS gene NAA+probe Ql (Swab specimen)
- Consumer Name Alpha Get Info
- Streptococcus pyogenes csrS gene, Swab specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.71
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Observation
Example Answer List LL2994-3
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Low (< 10^5 bacteria) | LA21375-3 | ||
| Medium (10^5-10^7 bacteria) | LA21374-6 | ||
| High (> 10^7 bacteria) | LA21373-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG41610-3 | Streptococcus pyogenes |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Streptococcus pyogenes csrS-Gen: |
| es-ES | Spanish (Spain) | gen csrS Streptococcus pyogenes: |
| es-MX | Spanish (Mexico) | Gen csrS de Streptococo pyogenes: |
| fr-FR | French (France) | Streptococcus pyogenes csrS gène: |
| it-IT | Italian (Italy) | Streptococcus pyogenes, gene csrS: Synonyms: Gene csrs di Streptococcus pyogenes Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Streptococcus pyogenis csrS geni: Synonyms: Mevcut |
| zh-CN | Chinese (China) | 化脓性链球菌 csrS 基因: Synonyms: A 族链球菌 csrS 基因; |
76596-6 Streptococcus pyogenes csrS gene [#/mass] in XXX.tissue by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185686-5 Streptococcus pyogenes csrS gene
Streptococcus pyogenes is an important cause of pharyngitis as well as more severe infections, including sepsis and toxic shock syndrome. The csrS gene is associated with S pyogenes virulence, and therefore, its presence in clinical specimens can be used to identify this organism as one of the pathogens responsible for a specific infection. PMID: 21371090
Source: Regenstrief LOINC, PMID: 21371090
Fully-Specified Name
- Component
- Streptococcus pyogenes csrS gene
- Property
- NCnt
- Time
- Pt
- System
- XXX.tissue
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- S pyogenes csrS XXX.tiss NAA+probe
- Display Name
- S. pyogenes csrS gene NAA+probe (Unsp tissue) [#/Mass]
- Consumer Name Alpha Get Info
- Streptococcus pyogenes csrS gene, Unspecified tissue
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG41610-3 | Streptococcus pyogenes |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Streptococcus pyogenes csrS-Gen: |
| es-ES | Spanish (Spain) | gen csrS Streptococcus pyogenes: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Gen csrS de Streptococo pyogenes: |
| fr-FR | French (France) | Streptococcus pyogenes csrS gène: |
| it-IT | Italian (Italy) | Streptococcus pyogenes, gene csrS: Synonyms: Contenuto Numerico Gene csrs di Streptococcus pyogenes Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Tessuto |
| tr-TR | Turkish (Turkey) | Streptococcus pyogenis csrS geni: |
| zh-CN | Chinese (China) | 化脓性链球菌 csrS 基因: Synonyms: A 族链球菌 csrS 基因; |
Example Units
| Unit | Source |
|---|---|
| {#}/g | Example UCUM Units |
76609-7 Streptococcus pyogenes csrS gene [#/volume] in XXX.body fluid by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185686-5 Streptococcus pyogenes csrS gene
Streptococcus pyogenes is an important cause of pharyngitis as well as more severe infections, including sepsis and toxic shock syndrome. The csrS gene is associated with S pyogenes virulence, and therefore, its presence in clinical specimens can be used to identify this organism as one of the pathogens responsible for a specific infection. PMID: 21371090
Source: Regenstrief LOINC, PMID: 21371090
Fully-Specified Name
- Component
- Streptococcus pyogenes csrS gene
- Property
- NCnc
- Time
- Pt
- System
- XXX.body fluid
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- S pyogenes csrS # XXX.body fld NAA+probe
- Display Name
- S. pyogenes csrS gene NAA+probe (Unsp body fluid) [#/Vol]
- Consumer Name Alpha Get Info
- Streptococcus pyogenes csrS gene, Unspecified body fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG41610-3 | Streptococcus pyogenes |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Streptococcus pyogenes csrS-Gen: |
| es-ES | Spanish (Spain) | gen csrS Streptococcus pyogenes: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Gen csrS de Streptococo pyogenes: |
| fr-FR | French (France) | Streptococcus pyogenes csrS gène: |
| it-IT | Italian (Italy) | Streptococcus pyogenes, gene csrS: Synonyms: Concentrazione Numerica Gene csrs di Streptococcus pyogenes Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Streptococcus pyogenis csrS geni: |
| zh-CN | Chinese (China) | 化脓性链球菌 csrS 基因: Synonyms: A 族链球菌 csrS 基因; |
Example Units
| Unit | Source |
|---|---|
| {#}/mL | Example UCUM Units |
76580-0 Candida albicans its gene [Presence] in Swab specimen by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185684-0 Candida albicans its gene
Candida albicans is an opportunistic fungal pathogen that can cause severe infections in immunosuppressed patients. The its genes are conserved across candida species, but specific internal sequences have enough variation to be able to distinguish amongst species. One such internal its sequence is specific for C albicans, and detecting this gene sequence in a clinical specimen can help identify C albicans as the causative organism in a particular infection. PMID: 9988514
Source: Regenstrief LOINC, PMID: 9988514
Fully-Specified Name
- Component
- Candida albicans its gene
- Property
- PrThr
- Time
- Pt
- System
- XXX.swab
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- C albicans its Swab Ql NAA+probe
- Display Name
- C. albicans its gene NAA+probe Ql (Swab specimen)
- Consumer Name Alpha Get Info
- Candida albicans its gene, Swab specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.71
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Observation
Example Answer List LL2994-3
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Low (< 10^5 bacteria) | LA21375-3 | ||
| Medium (10^5-10^7 bacteria) | LA21374-6 | ||
| High (> 10^7 bacteria) | LA21373-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | Gen ITS candida albicans: |
| es-MX | Spanish (Mexico) | Candida albicans su gen: |
| fr-FR | French (France) | Candida albicans its gène: |
| it-IT | Italian (Italy) | Candida albicans, gene its: Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Candida albicans its geni: Synonyms: Mevcut |
| zh-CN | Chinese (China) | 白色假丝酵母 its 基因: Synonyms: XXX.拭子（拭样、 |
76595-8 Candida albicans its gene [#/mass] in XXX.tissue by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185684-0 Candida albicans its gene
Candida albicans is an opportunistic fungal pathogen that can cause severe infections in immunosuppressed patients. The its genes are conserved across candida species, but specific internal sequences have enough variation to be able to distinguish amongst species. One such internal its sequence is specific for C albicans, and detecting this gene sequence in a clinical specimen can help identify C albicans as the causative organism in a particular infection. PMID: 9988514
Source: Regenstrief LOINC, PMID: 9988514
Fully-Specified Name
- Component
- Candida albicans its gene
- Property
- NCnt
- Time
- Pt
- System
- XXX.tissue
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- C albicans its XXX.tiss NAA+probe
- Display Name
- C. albicans its gene NAA+probe (Unsp tissue) [#/Mass]
- Consumer Name Alpha Get Info
- Candida albicans its gene, Unspecified tissue
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | Gen ITS candida albicans: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Candida albicans su gen: |
| fr-FR | French (France) | Candida albicans its gène: |
| it-IT | Italian (Italy) | Candida albicans, gene its: Synonyms: Contenuto Numerico Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Tessuto |
| tr-TR | Turkish (Turkey) | Candida albicans its geni: |
| zh-CN | Chinese (China) | 白色假丝酵母 its 基因: Synonyms: 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/g | Example UCUM Units |
76608-9 Candida albicans its gene [#/volume] in XXX.body fluid by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185684-0 Candida albicans its gene
Candida albicans is an opportunistic fungal pathogen that can cause severe infections in immunosuppressed patients. The its genes are conserved across candida species, but specific internal sequences have enough variation to be able to distinguish amongst species. One such internal its sequence is specific for C albicans, and detecting this gene sequence in a clinical specimen can help identify C albicans as the causative organism in a particular infection. PMID: 9988514
Source: Regenstrief LOINC, PMID: 9988514
Fully-Specified Name
- Component
- Candida albicans its gene
- Property
- NCnc
- Time
- Pt
- System
- XXX.body fluid
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- C albicans its # XXX.body fld NAA+probe
- Display Name
- C. albicans its gene NAA+probe (Unsp body fluid) [#/Vol]
- Consumer Name Alpha Get Info
- Candida albicans its gene, Unspecified body fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | Gen ITS candida albicans: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Candida albicans su gen: |
| fr-FR | French (France) | Candida albicans its gène: |
| it-IT | Italian (Italy) | Candida albicans, gene its: Synonyms: Concentrazione Numerica Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Candida albicans its geni: |
| zh-CN | Chinese (China) | 白色假丝酵母 its 基因: Synonyms: 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/mL | Example UCUM Units |
76578-4 Pseudomonas aeruginosa regA gene [Presence] in Swab specimen by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185682-4 Pseudomonas aeruginosa regA gene
A species of gram-negative, aerobic, rod-shaped bacteria commonly isolated from clinical specimens (wound, burn, and urinary tract infections). It is also found widely distributed in soil and water. P. aeruginosa is a major agent of nosocomial infection.
Source: National Library of Medicine, MeSH 2006
LP185682-4 Pseudomonas aeruginosa regA gene
Pseudomonas aeruginosa is an important opportunistic pathogen that causes severe respiratory infection. Exotoxin A (toxA) is one of its primary virulence factors, and the presence of RegA , a protein encoded by the regA gene, is essential for P aeruginosa toxA expression. Identification of the regA gene in clinical specimens can be useful for identifying P aeruginosa as a causative pathogen. PMID: 18048935
Source: Regenstrief LOINC, PMID: 18048935
Fully-Specified Name
- Component
- Pseudomonas aeruginosa regA gene
- Property
- PrThr
- Time
- Pt
- System
- XXX.swab
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- P aerug regA Swab Ql NAA+probe
- Display Name
- P. aeruginosa regA gene NAA+probe Ql (Swab specimen)
- Consumer Name Alpha Get Info
- Pseudomonas aeruginosa regA gene, Swab specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.71
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Observation
Example Answer List LL2994-3
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Low (< 10^5 bacteria) | LA21375-3 | ||
| Medium (10^5-10^7 bacteria) | LA21374-6 | ||
| High (> 10^7 bacteria) | LA21373-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | gen regA Pseudomonas aeruginosa: |
| es-MX | Spanish (Mexico) | Gen regA de Pseudomonas aeruginosa: |
| fr-FR | French (France) | Pseudomonas aeruginosa regA gène: |
| it-IT | Italian (Italy) | Pseudomonas aeruginosa, gene regA: Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Pseudomonas aeruginosa regA geni: Synonyms: Mevcut |
| zh-CN | Chinese (China) | 铜绿假单胞菌 regA 基因: Synonyms: XXX.拭子（拭样、 |
76593-3 Pseudomonas aeruginosa regA gene [#/mass] in XXX.tissue by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185682-4 Pseudomonas aeruginosa regA gene
A species of gram-negative, aerobic, rod-shaped bacteria commonly isolated from clinical specimens (wound, burn, and urinary tract infections). It is also found widely distributed in soil and water. P. aeruginosa is a major agent of nosocomial infection.
Source: National Library of Medicine, MeSH 2006
LP185682-4 Pseudomonas aeruginosa regA gene
Pseudomonas aeruginosa is an important opportunistic pathogen that causes severe respiratory infection. Exotoxin A (toxA) is one of its primary virulence factors, and the presence of RegA , a protein encoded by the regA gene, is essential for P aeruginosa toxA expression. Identification of the regA gene in clinical specimens can be useful for identifying P aeruginosa as a causative pathogen. PMID: 18048935
Source: Regenstrief LOINC, PMID: 18048935
Fully-Specified Name
- Component
- Pseudomonas aeruginosa regA gene
- Property
- NCnt
- Time
- Pt
- System
- XXX.tissue
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- P aerug regA XXX.tiss NAA+probe
- Display Name
- P. aeruginosa regA gene NAA+probe (Unsp tissue) [#/Mass]
- Consumer Name Alpha Get Info
- Pseudomonas aeruginosa regA gene, Unspecified tissue
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | gen regA Pseudomonas aeruginosa: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Gen regA de Pseudomonas aeruginosa: |
| fr-FR | French (France) | Pseudomonas aeruginosa regA gène: |
| it-IT | Italian (Italy) | Pseudomonas aeruginosa, gene regA: Synonyms: Contenuto Numerico Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Tessuto |
| tr-TR | Turkish (Turkey) | Pseudomonas aeruginosa regA geni: |
| zh-CN | Chinese (China) | 铜绿假单胞菌 regA 基因: Synonyms: 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/g | Example UCUM Units |
76606-3 Pseudomonas aeruginosa regA gene [#/volume] in XXX.body fluid by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185682-4 Pseudomonas aeruginosa regA gene
A species of gram-negative, aerobic, rod-shaped bacteria commonly isolated from clinical specimens (wound, burn, and urinary tract infections). It is also found widely distributed in soil and water. P. aeruginosa is a major agent of nosocomial infection.
Source: National Library of Medicine, MeSH 2006
LP185682-4 Pseudomonas aeruginosa regA gene
Pseudomonas aeruginosa is an important opportunistic pathogen that causes severe respiratory infection. Exotoxin A (toxA) is one of its primary virulence factors, and the presence of RegA , a protein encoded by the regA gene, is essential for P aeruginosa toxA expression. Identification of the regA gene in clinical specimens can be useful for identifying P aeruginosa as a causative pathogen. PMID: 18048935
Source: Regenstrief LOINC, PMID: 18048935
Fully-Specified Name
- Component
- Pseudomonas aeruginosa regA gene
- Property
- NCnc
- Time
- Pt
- System
- XXX.body fluid
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- P aerug regA # XXX.body fld NAA+probe
- Display Name
- P. aeruginosa regA gene NAA+probe (Unsp body fluid) [#/Vol]
- Consumer Name Alpha Get Info
- Pseudomonas aeruginosa regA gene, Unspecified body fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | gen regA Pseudomonas aeruginosa: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Gen regA de Pseudomonas aeruginosa: |
| fr-FR | French (France) | Pseudomonas aeruginosa regA gène: |
| it-IT | Italian (Italy) | Pseudomonas aeruginosa, gene regA: Synonyms: Concentrazione Numerica Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Pseudomonas aeruginosa regA geni: |
| zh-CN | Chinese (China) | 铜绿假单胞菌 regA 基因: Synonyms: 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/mL | Example UCUM Units |
76577-6 Staphylococcus aureus sau3AI gene [Presence] in Swab specimen by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185681-6 Staphylococcus aureus sau3AI gene
Staphylococcus aureus group II strains are associated with skin infections, and the sau3AI gene is conserved across S aureus group II strains. The gene produces a restriction endonuclease, and the presence of this gene in clinical specimens can be used to identify S aureus group II as one of the pathogens responsible for a specific infection. PMID: 885840
Source: Regenstrief LOINC, PMID: 885840
Fully-Specified Name
- Component
- Staphylococcus aureus sau3AI gene
- Property
- PrThr
- Time
- Pt
- System
- XXX.swab
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- S aureus sau3AI Swab Ql NAA+probe
- Display Name
- S. aureus sau3AI gene NAA+probe Ql (Swab specimen)
- Consumer Name Alpha Get Info
- Staphylococcus aureus sau3AI gene, Swab specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.71
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Observation
Example Answer List LL2994-3
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Low (< 10^5 bacteria) | LA21375-3 | ||
| Medium (10^5-10^7 bacteria) | LA21374-6 | ||
| High (> 10^7 bacteria) | LA21373-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | gen sau3AI Staphylococcus aureus: |
| es-MX | Spanish (Mexico) | Gen de Staphylococo aureus sau3AI: |
| fr-FR | French (France) | Staphylococcus aureus sau3AI gène: |
| it-IT | Italian (Italy) | Staphylococcus aureus, gene sau3AI: Synonyms: Gene di sau3AI di Staphylococcus aureus Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Staphylococcus aureus sau3AI geni: Synonyms: Mevcut |
| zh-CN | Chinese (China) | 金黄色葡萄球菌 sau3AI 基因: Synonyms: XXX.拭子（拭样、 |
76592-5 Staphylococcus aureus sau3AI gene [#/mass] in XXX.tissue by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185681-6 Staphylococcus aureus sau3AI gene
Staphylococcus aureus group II strains are associated with skin infections, and the sau3AI gene is conserved across S aureus group II strains. The gene produces a restriction endonuclease, and the presence of this gene in clinical specimens can be used to identify S aureus group II as one of the pathogens responsible for a specific infection. PMID: 885840
Source: Regenstrief LOINC, PMID: 885840
Fully-Specified Name
- Component
- Staphylococcus aureus sau3AI gene
- Property
- NCnt
- Time
- Pt
- System
- XXX.tissue
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- S aureus sau3AI XXX.tiss NAA+probe
- Display Name
- S. aureus sau3AI gene NAA+probe (Unsp tissue) [#/Mass]
- Consumer Name Alpha Get Info
- Staphylococcus aureus sau3AI gene, Unspecified tissue
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | gen sau3AI Staphylococcus aureus: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Gen de Staphylococo aureus sau3AI: |
| fr-FR | French (France) | Staphylococcus aureus sau3AI gène: |
| it-IT | Italian (Italy) | Staphylococcus aureus, gene sau3AI: Synonyms: Contenuto Numerico Gene di sau3AI di Staphylococcus aureus Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Tessuto |
| tr-TR | Turkish (Turkey) | Staphylococcus aureus sau3AI geni: |
| zh-CN | Chinese (China) | 金黄色葡萄球菌 sau3AI 基因: Synonyms: 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/g | Example UCUM Units |
76605-5 Staphylococcus aureus sau3AI gene [#/volume] in XXX.body fluid by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185681-6 Staphylococcus aureus sau3AI gene
Staphylococcus aureus group II strains are associated with skin infections, and the sau3AI gene is conserved across S aureus group II strains. The gene produces a restriction endonuclease, and the presence of this gene in clinical specimens can be used to identify S aureus group II as one of the pathogens responsible for a specific infection. PMID: 885840
Source: Regenstrief LOINC, PMID: 885840
Fully-Specified Name
- Component
- Staphylococcus aureus sau3AI gene
- Property
- NCnc
- Time
- Pt
- System
- XXX.body fluid
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- S aureus sau3AI # XXX.body fld NAA+probe
- Display Name
- S. aureus sau3AI gene NAA+probe (Unsp body fluid) [#/Vol]
- Consumer Name Alpha Get Info
- Staphylococcus aureus sau3AI gene, Unspecified body fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | gen sau3AI Staphylococcus aureus: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Gen de Staphylococo aureus sau3AI: |
| fr-FR | French (France) | Staphylococcus aureus sau3AI gène: |
| it-IT | Italian (Italy) | Staphylococcus aureus, gene sau3AI: Synonyms: Concentrazione Numerica Gene di sau3AI di Staphylococcus aureus Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Staphylococcus aureus sau3AI geni: |
| zh-CN | Chinese (China) | 金黄色葡萄球菌 sau3AI 基因: Synonyms: 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/mL | Example UCUM Units |
76584-2 Enterococcus faecalis cpn60 gene [Presence] in Swab specimen by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185689-9 Enterococcus faecalis cpn60 gene
Enterococci species are common pathogens in hospital-acquired infections, including urinary tract infections and surgical wound infections. The sodA gene is conserved across enterococcus species, but the variability of a specific internal sodA sequence can be used to differentiate between enterococcus species. A particular sodA sequence identifies Enterococcus faecium, and the identification of this sequence in a clinical specimen can be used to identify E faecium as the pathogen responsible for a particular infection. PMID: 10618129 Likewise, the cpn60 gene is conserved across many bacterial genera, but it also contains an internal sequence with enough variation to distinguish among different enterococcus species. Identification of a particular cpn60 sequence in a clinical specimen has been used to identify Enterococcus faecalis as a causative infectious organism. PMID: 11060051
Source: Regenstrief LOINC, PMID: 10618129
Fully-Specified Name
- Component
- Enterococcus faecalis cpn60 gene
- Property
- PrThr
- Time
- Pt
- System
- XXX.swab
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- E faecal cpn60 Swab Ql NAA+probe
- Display Name
- E. faecalis cpn60 gene NAA+probe Ql (Swab specimen)
- Consumer Name Alpha Get Info
- Enterococcus faecalis cpn60 gene, Swab specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.71
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Observation
Example Answer List LL2994-3
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Low (< 10^5 bacteria) | LA21375-3 | ||
| Medium (10^5-10^7 bacteria) | LA21374-6 | ||
| High (> 10^7 bacteria) | LA21373-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | gen cpn60 Enterococcus faecalis: |
| es-MX | Spanish (Mexico) | Gen cpn60 de Enterococo faecalis: |
| fr-FR | French (France) | Enterococcus faecalis cpn60 gène: |
| it-IT | Italian (Italy) | Enterococcus faecalis cpn60, gene: Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Enterococcus faecalis cpn60 geni: Synonyms: Mevcut |
| zh-CN | Chinese (China) | 粪肠球菌 cpn60 基因: Synonyms: XXX.拭子（拭样、 |
76599-0 Enterococcus faecalis cpn60 gene [#/mass] in XXX.tissue by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185689-9 Enterococcus faecalis cpn60 gene
Enterococci species are common pathogens in hospital-acquired infections, including urinary tract infections and surgical wound infections. The sodA gene is conserved across enterococcus species, but the variability of a specific internal sodA sequence can be used to differentiate between enterococcus species. A particular sodA sequence identifies Enterococcus faecium, and the identification of this sequence in a clinical specimen can be used to identify E faecium as the pathogen responsible for a particular infection. PMID: 10618129 Likewise, the cpn60 gene is conserved across many bacterial genera, but it also contains an internal sequence with enough variation to distinguish among different enterococcus species. Identification of a particular cpn60 sequence in a clinical specimen has been used to identify Enterococcus faecalis as a causative infectious organism. PMID: 11060051
Source: Regenstrief LOINC, PMID: 10618129
Fully-Specified Name
- Component
- Enterococcus faecalis cpn60 gene
- Property
- NCnt
- Time
- Pt
- System
- XXX.tissue
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- E faecal cpn60 XXX.tiss NAA+probe
- Display Name
- E. faecalis cpn60 gene NAA+probe (Unsp tissue) [#/Mass]
- Consumer Name Alpha Get Info
- Enterococcus faecalis cpn60 gene, Unspecified tissue
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | gen cpn60 Enterococcus faecalis: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Gen cpn60 de Enterococo faecalis: |
| fr-FR | French (France) | Enterococcus faecalis cpn60 gène: |
| it-IT | Italian (Italy) | Enterococcus faecalis cpn60, gene: Synonyms: Contenuto Numerico Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Tessuto |
| tr-TR | Turkish (Turkey) | Enterococcus faecalis cpn60 geni: |
| zh-CN | Chinese (China) | 粪肠球菌 cpn60 基因: Synonyms: 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/g | Example UCUM Units |
76612-1 Enterococcus faecalis cpn60 gene [#/volume] in XXX.body fluid by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185689-9 Enterococcus faecalis cpn60 gene
Enterococci species are common pathogens in hospital-acquired infections, including urinary tract infections and surgical wound infections. The sodA gene is conserved across enterococcus species, but the variability of a specific internal sodA sequence can be used to differentiate between enterococcus species. A particular sodA sequence identifies Enterococcus faecium, and the identification of this sequence in a clinical specimen can be used to identify E faecium as the pathogen responsible for a particular infection. PMID: 10618129 Likewise, the cpn60 gene is conserved across many bacterial genera, but it also contains an internal sequence with enough variation to distinguish among different enterococcus species. Identification of a particular cpn60 sequence in a clinical specimen has been used to identify Enterococcus faecalis as a causative infectious organism. PMID: 11060051
Source: Regenstrief LOINC, PMID: 10618129
Fully-Specified Name
- Component
- Enterococcus faecalis cpn60 gene
- Property
- NCnc
- Time
- Pt
- System
- XXX.body fluid
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- E faecal cpn60 # XXX.body fld NAA+probe
- Display Name
- E. faecalis cpn60 gene NAA+probe (Unsp body fluid) [#/Vol]
- Consumer Name Alpha Get Info
- Enterococcus faecalis cpn60 gene, Unspecified body fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | gen cpn60 Enterococcus faecalis: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Gen cpn60 de Enterococo faecalis: |
| fr-FR | French (France) | Enterococcus faecalis cpn60 gène: |
| it-IT | Italian (Italy) | Enterococcus faecalis cpn60, gene: Synonyms: Concentrazione Numerica Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Enterococcus faecalis cpn60 geni: |
| zh-CN | Chinese (China) | 粪肠球菌 cpn60 基因: Synonyms: 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/mL | Example UCUM Units |
76579-2 Enterococcus faecium sodA gene [Presence] in Swab specimen by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185683-2 Enterococcus faecium sodA gene
Enterococci species are common pathogens in hospital-acquired infections, including urinary tract infections and surgical wound infections. The sodA gene is conserved across enterococcus species, but the variability of a specific internal sodA sequence can be used to differentiate between enterococcus species. A particular sodA sequence identifies Enterococcus faecium, and the identification of this sequence in a clinical specimen can be used to identify E faecium as the pathogen responsible for a particular infection. PMID: 10618129 Likewise, the cpn60 gene is conserved across many bacterial genera, but it also contains an internal sequence with enough variation to distinguish among different enterococcus species. Identification of a particular cpn60 sequence in a clinical specimen has been used to identify Enterococcus faecalis as a causative infectious organism. PMID: 11060051
Source: Regenstrief LOINC, PMID: 10618129
Fully-Specified Name
- Component
- Enterococcus faecium sodA gene
- Property
- PrThr
- Time
- Pt
- System
- XXX.swab
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- E faecium sodA Swab Ql NAA+probe
- Display Name
- E. faecium sodA gene NAA+probe Ql (Swab specimen)
- Consumer Name Alpha Get Info
- Enterococcus faecium sodA gene, Swab specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.71
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Observation
Example Answer List LL2994-3
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Low (< 10^5 bacteria) | LA21375-3 | ||
| Medium (10^5-10^7 bacteria) | LA21374-6 | ||
| High (> 10^7 bacteria) | LA21373-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | gen sodA Enterococcus faecium: |
| es-MX | Spanish (Mexico) | Enterococo faecium sodA gen: |
| fr-FR | French (France) | Enterococcus faecium sodA gène: |
| it-IT | Italian (Italy) | Enterococcus faecium sodA, gene: Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Enterococcus faecium sodA geni: Synonyms: Mevcut |
| zh-CN | Chinese (China) | 屎肠球菌 sodA 基因: Synonyms: XXX.拭子（拭样、 |
76594-1 Enterococcus faecium sodA gene [#/mass] in XXX.tissue by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185683-2 Enterococcus faecium sodA gene
Enterococci species are common pathogens in hospital-acquired infections, including urinary tract infections and surgical wound infections. The sodA gene is conserved across enterococcus species, but the variability of a specific internal sodA sequence can be used to differentiate between enterococcus species. A particular sodA sequence identifies Enterococcus faecium, and the identification of this sequence in a clinical specimen can be used to identify E faecium as the pathogen responsible for a particular infection. PMID: 10618129 Likewise, the cpn60 gene is conserved across many bacterial genera, but it also contains an internal sequence with enough variation to distinguish among different enterococcus species. Identification of a particular cpn60 sequence in a clinical specimen has been used to identify Enterococcus faecalis as a causative infectious organism. PMID: 11060051
Source: Regenstrief LOINC, PMID: 10618129
Fully-Specified Name
- Component
- Enterococcus faecium sodA gene
- Property
- NCnt
- Time
- Pt
- System
- XXX.tissue
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- E faecium sodA XXX.tiss NAA+probe
- Display Name
- E. faecium sodA gene NAA+probe (Unsp tissue) [#/Mass]
- Consumer Name Alpha Get Info
- Enterococcus faecium sodA gene, Unspecified tissue
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | gen sodA Enterococcus faecium: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Enterococo faecium sodA gen: |
| fr-FR | French (France) | Enterococcus faecium sodA gène: |
| it-IT | Italian (Italy) | Enterococcus faecium sodA, gene: Synonyms: Contenuto Numerico Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Tessuto |
| tr-TR | Turkish (Turkey) | Enterococcus faecium sodA geni: |
| zh-CN | Chinese (China) | 屎肠球菌 sodA 基因: Synonyms: 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/g | Example UCUM Units |
76607-1 Enterococcus faecium sodA gene [#/volume] in XXX.body fluid by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185683-2 Enterococcus faecium sodA gene
Enterococci species are common pathogens in hospital-acquired infections, including urinary tract infections and surgical wound infections. The sodA gene is conserved across enterococcus species, but the variability of a specific internal sodA sequence can be used to differentiate between enterococcus species. A particular sodA sequence identifies Enterococcus faecium, and the identification of this sequence in a clinical specimen can be used to identify E faecium as the pathogen responsible for a particular infection. PMID: 10618129 Likewise, the cpn60 gene is conserved across many bacterial genera, but it also contains an internal sequence with enough variation to distinguish among different enterococcus species. Identification of a particular cpn60 sequence in a clinical specimen has been used to identify Enterococcus faecalis as a causative infectious organism. PMID: 11060051
Source: Regenstrief LOINC, PMID: 10618129
Fully-Specified Name
- Component
- Enterococcus faecium sodA gene
- Property
- NCnc
- Time
- Pt
- System
- XXX.body fluid
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- E faecium sodA # XXX.body fld NAA+probe
- Display Name
- E. faecium sodA gene NAA+probe (Unsp body fluid) [#/Vol]
- Consumer Name Alpha Get Info
- Enterococcus faecium sodA gene, Unspecified body fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | gen sodA Enterococcus faecium: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Enterococo faecium sodA gen: |
| fr-FR | French (France) | Enterococcus faecium sodA gène: |
| it-IT | Italian (Italy) | Enterococcus faecium sodA, gene: Synonyms: Concentrazione Numerica Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Enterococcus faecium sodA geni: |
| zh-CN | Chinese (China) | 屎肠球菌 sodA 基因: Synonyms: 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/mL | Example UCUM Units |
76576-8 Serratia marcescens gyrB gene [Presence] in Swab specimen by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185680-8 Serratia marcescens gyrB gene
Serratia marcescens is an important cause of hospital-acquired urinary tract and bloodstream infections. The gyrB gene is conserved among strains of S Marcescens, and therefore, the presence of the gene in clinical specimens can be used to identify this organism as one of the pathogens responsible for a specific infection. PMID: 25070509
Source: Regenstrief LOINC, PMID: 25070509
Fully-Specified Name
- Component
- Serratia marcescens gyrB gene
- Property
- PrThr
- Time
- Pt
- System
- XXX.swab
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- S marcesc gyrB Swab Ql NAA+probe
- Display Name
- S. marcescens gyrB gene NAA+probe Ql (Swab specimen)
- Consumer Name Alpha Get Info
- Serratia marcescens gyrB gene, Swab specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.71
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Observation
Example Answer List LL2994-3
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Low (< 10^5 bacteria) | LA21375-3 | ||
| Medium (10^5-10^7 bacteria) | LA21374-6 | ||
| High (> 10^7 bacteria) | LA21373-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Serratia marcescens gyrB-Gen: |
| es-ES | Spanish (Spain) | gen gyrB Serratia marcescens: |
| es-MX | Spanish (Mexico) | Gen gyrB de Serratia marcescens: |
| fr-FR | French (France) | Serratia marcescens gyrB gène: |
| it-IT | Italian (Italy) | Serratia marcescens, gene gyrB: Synonyms: Gene gyrB di Serratia marcescens Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Serratia marcescens gyrB geni: Synonyms: Mevcut |
| zh-CN | Chinese (China) | 粘质沙雷氏菌 gyrB 基因: Synonyms: XXX.拭子（拭样、 |
76591-7 Serratia marcescens gyrB gene [#/mass] in XXX.tissue by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185680-8 Serratia marcescens gyrB gene
Serratia marcescens is an important cause of hospital-acquired urinary tract and bloodstream infections. The gyrB gene is conserved among strains of S Marcescens, and therefore, the presence of the gene in clinical specimens can be used to identify this organism as one of the pathogens responsible for a specific infection. PMID: 25070509
Source: Regenstrief LOINC, PMID: 25070509
Fully-Specified Name
- Component
- Serratia marcescens gyrB gene
- Property
- NCnt
- Time
- Pt
- System
- XXX.tissue
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- S marcesc gyrB XXX.tiss NAA+probe
- Display Name
- S. marcescens gyrB gene NAA+probe (Unsp tissue) [#/Mass]
- Consumer Name Alpha Get Info
- Serratia marcescens gyrB gene, Unspecified tissue
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Serratia marcescens gyrB-Gen: |
| es-ES | Spanish (Spain) | gen gyrB Serratia marcescens: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Gen gyrB de Serratia marcescens: |
| fr-FR | French (France) | Serratia marcescens gyrB gène: |
| it-IT | Italian (Italy) | Serratia marcescens, gene gyrB: Synonyms: Contenuto Numerico Gene gyrB di Serratia marcescens Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Tessuto |
| tr-TR | Turkish (Turkey) | Serratia marcescens gyrB geni: |
| zh-CN | Chinese (China) | 粘质沙雷氏菌 gyrB 基因: Synonyms: 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/g | Example UCUM Units |
76604-8 Serratia marcescens gyrB gene [#/volume] in XXX.body fluid by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP185680-8 Serratia marcescens gyrB gene
Serratia marcescens is an important cause of hospital-acquired urinary tract and bloodstream infections. The gyrB gene is conserved among strains of S Marcescens, and therefore, the presence of the gene in clinical specimens can be used to identify this organism as one of the pathogens responsible for a specific infection. PMID: 25070509
Source: Regenstrief LOINC, PMID: 25070509
Fully-Specified Name
- Component
- Serratia marcescens gyrB gene
- Property
- NCnc
- Time
- Pt
- System
- XXX.body fluid
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- S marcesc gyrB # XXX.body fld NAA+probe
- Display Name
- S. marcescens gyrB gene NAA+probe (Unsp body fluid) [#/Vol]
- Consumer Name Alpha Get Info
- Serratia marcescens gyrB gene, Unspecified body fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Serratia marcescens gyrB-Gen: |
| es-ES | Spanish (Spain) | gen gyrB Serratia marcescens: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | Gen gyrB de Serratia marcescens: |
| fr-FR | French (France) | Serratia marcescens gyrB gène: |
| it-IT | Italian (Italy) | Serratia marcescens, gene gyrB: Synonyms: Concentrazione Numerica Gene gyrB di Serratia marcescens Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Serratia marcescens gyrB geni: |
| zh-CN | Chinese (China) | 粘质沙雷氏菌 gyrB 基因: Synonyms: 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/mL | Example UCUM Units |
76575-0 Bacterial 16S rRNA [Presence] in Specimen by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP189395-9 Bacterial 16S rRNA
Sequencing of the 16S rRNA gene is commonly used for taxonomic classification and identification of bacteria. The 16S gene is approximately 1500bp long and is universal in bacteria, allowing its relationships to be measured among all bacteria. Because it is universal among all bacteria, detection of 16S RNA can also be used to estimate bacterial load. The 16S sequence has a role in identifying bacteria that are atypical or rare that are unable to be identified by phenotypic tests alone. In general there is not enough variation in 16S sequence for its use in distinguishing strains for epidemiological purposes.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Bacterial 16S rRNA
- Property
- PrThr
- Time
- Pt
- System
- XXX
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- Bact 16S rRNA Spec Ql NAA+probe
- Display Name
- Bacterial 16S rRNA NAA+probe Ql (Specimen)
- Consumer Name Alpha Get Info
- Bacterial 16S, Specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.78
- Change Reason
- Release 2.78: ORDER_OBS: Change from Obs to Both; Previous Releases: The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Both
Example Answer List LL2994-3
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Low (< 10^5 bacteria) | LA21375-3 | ||
| Medium (10^5-10^7 bacteria) | LA21374-6 | ||
| High (> 10^7 bacteria) | LA21373-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Bakterielle 16S rRNA ql. /SM PCR |
| es-ES | Spanish (Spain) | RNA ribosomico 16S rRNA: |
| es-MX | Spanish (Mexico) | ARNr 16S bacteriano: |
| fr-FR | French (France) | Bactérie ARNr 16S: |
| it-IT | Italian (Italy) | Batteri 16S rRNA: Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| nl-NL | Dutch (Netherlands) | bacterieel 16S rRNA: Synonyms: probe.amp.tar ribosomaal RNA |
| tr-TR | Turkish (Turkey) | Bakteriyel 16S rRNA: Synonyms: Mevcut |
| zh-CN | Chinese (China) | 细菌 16S rRNA: Synonyms: Gen-Probe rRNA 探针法.扩增.靶向 不明的; |
76603-0 Bacterial 16S rRNA [#/volume] in XXX.body fluid by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP189395-9 Bacterial 16S rRNA
Sequencing of the 16S rRNA gene is commonly used for taxonomic classification and identification of bacteria. The 16S gene is approximately 1500bp long and is universal in bacteria, allowing its relationships to be measured among all bacteria. Because it is universal among all bacteria, detection of 16S RNA can also be used to estimate bacterial load. The 16S sequence has a role in identifying bacteria that are atypical or rare that are unable to be identified by phenotypic tests alone. In general there is not enough variation in 16S sequence for its use in distinguishing strains for epidemiological purposes.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Bacterial 16S rRNA
- Property
- NCnc
- Time
- Pt
- System
- XXX.body fluid
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- Bact 16S rRNA # XXX.body fld NAA+probe
- Display Name
- Bacterial 16S rRNA NAA+probe (Unsp body fluid) [#/Vol]
- Consumer Name Alpha Get Info
- Bacterial 16S, Unspecified body fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | RNA ribosomico 16S rRNA: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | ARNr 16S bacteriano: |
| fr-FR | French (France) | Bactérie ARNr 16S: |
| it-IT | Italian (Italy) | Batteri 16S rRNA: Synonyms: Concentrazione Numerica Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| tr-TR | Turkish (Turkey) | Bakteriyel 16S rRNA: |
| zh-CN | Chinese (China) | 细菌 16S rRNA: Synonyms: Gen-Probe rRNA 探针法.扩增.靶向 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/mL | Example UCUM Units |
76590-9 Bacterial 16S rRNA [#/mass] in XXX.tissue by NAA with probe detection
Term Description
This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC
Part Descriptions
LP189395-9 Bacterial 16S rRNA
Sequencing of the 16S rRNA gene is commonly used for taxonomic classification and identification of bacteria. The 16S gene is approximately 1500bp long and is universal in bacteria, allowing its relationships to be measured among all bacteria. Because it is universal among all bacteria, detection of 16S RNA can also be used to estimate bacterial load. The 16S sequence has a role in identifying bacteria that are atypical or rare that are unable to be identified by phenotypic tests alone. In general there is not enough variation in 16S sequence for its use in distinguishing strains for epidemiological purposes.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Bacterial 16S rRNA
- Property
- NCnt
- Time
- Pt
- System
- XXX.tissue
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- Bact 16S rRNA XXX.tiss NAA+probe
- Display Name
- Bacterial 16S rRNA NAA+probe (Unsp tissue) [#/Mass]
- Consumer Name Alpha Get Info
- Bacterial 16S, Unspecified tissue
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.52
- Last Updated
- Version 2.63
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | RNA ribosomico 16S rRNA: Synonyms: Cuantitativo |
| es-MX | Spanish (Mexico) | ARNr 16S bacteriano: |
| fr-FR | French (France) | Bactérie ARNr 16S: |
| it-IT | Italian (Italy) | Batteri 16S rRNA: Synonyms: Contenuto Numerico Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Tessuto |
| tr-TR | Turkish (Turkey) | Bakteriyel 16S rRNA: |
| zh-CN | Chinese (China) | 细菌 16S rRNA: Synonyms: Gen-Probe rRNA 探针法.扩增.靶向 不明的; |
Example Units
| Unit | Source |
|---|---|
| {#}/g | Example UCUM Units |
48813-0 Methicillin resistance mecA gene [Presence] by Molecular method
Fully-Specified Name
- Component
- Bacterial methicillin resistance mecA gene
- Property
- PrThr
- Time
- Pt
- System
- Isolate/Specimen
- Scale
- Ord
- Method
- Molgen
Additional Names
- Short Name
- mecA Islt/Spm Ql
- Display Name
- Methicillin resistance mecA gene Molgen Ql (Islt/Spec)
- Consumer Name Alpha Get Info
- Methicillin resistance mecA gene
Basic Attributes
- Class
- ABXBACT
- Type
- Laboratory
- First Released
- Version 2.21
- Last Updated
- Version 2.73
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.; Removed parentheses around gene name in Component based on the current LOINC model.; ; Updated System from "Isolate" and Method from "Probe.amp.tar" according to the new, more sustainable model for LOINC molecular resistance terms [Approved by LOINC Laboratory Committee in June 2018].
- Order vs. Observation
- Both
- Common Test Rank Get Info
- 3578
Example Answer List LL360-9
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Positive Copyright http://snomed.info/sct ID:10828004 Positive (qualifier value) | LA6576-8 | ||
| Negative Copyright http://snomed.info/sct ID:260385009 Negative (qualifier value) | LA6577-6 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 104991-5 | Bacterial resistance panel |
| 85762-3 | Blood pathogens panel by NAA with non-probe detection in Positive blood culture |
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 92789-7 | Gram positive blood culture panel by NAA with probe detection in Positive blood culture |
| 72892-3 | MRSA SCCmec and mecA genes panel - Nose by NAA with probe detection |
| 97326-3 | Staphylococcus aureus identification and resistance panel by Molecular genetics method |
| 99012-7 | Urinary tract pathogens panel - Urine by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Methicillin Resistenz Gen (MecA) ql. |
| de-DE | German (Germany) | Bakterielle Methicillin-Resistenz mecA-Gen: |
| es-ES | Spanish (Spain) | Gen mecA bacterias meticilin resistente: |
| es-MX | Spanish (Mexico) | Gen mecA de resistencia a la meticilina bacteriana: |
| fr-CA | French (Canada) | Gène bactérien de résistance à la méthicilline mecA: |
| fr-FR | French (France) | Résistance bactérienne à la méticilline mecA gène: |
| it-IT | Italian (Italy) | Gene mecA di resistenza batterica a meticillina: Synonyms: Gene mecA Genetica molecolare Isolato o Campione Presenza o Soglia Punto nel tempo (episodio) Suscettibilità agli antibiotici |
| nl-NL | Dutch (Netherlands) | bacteriële meticillineresistentie mecA-gen: Synonyms: isolaat/specimen molgen |
| pt-BR | Portuguese (Brazil) | mecA gene: Synonyms: Methicillin resistance gene; |
| zh-CN | Chinese (China) | 细菌甲氧西林耐药 mecA 基因: Synonyms: 2,6-二甲氧基苯青霉素; |
Third Party Copyright
This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.
This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.
Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to http://www.snomed.org/snomed-ct/get-snomed-ct or info@snomed.org<mailto:info@snomed.org>. This may incur a fee in SNOMED International non-Member countries.
48814-8 Vancomycin resistance vanA gene [Presence] by Molecular method
Part Descriptions
LP63185-0 Bacterial vancomycin resistance vanA gene
This test is used for the detection of vancomycin resistance genes by multiplex PCR. Vancomycin is a glycopeptide antibiotic used to treat various infections, primarily those caused by gram-positive bacteria. Vancomycin resistance genes were first found in enterococci, and more recently have been found in Staphylococcus aureus. The emergence of vancomycin-resistant enterococci (VRE) and vancomycin-resistant Staphylococcus aureus (VRSA) in hospitalized patients has lead to a restricted use of vancomycin. To date, multiple vancomycin resistance genes have been characterized, including: vanA, vanB, vanC (vanC-1, vanC-2, vanC-3), and VanD. Of the six van types, vanA and vanB are the most resistant to vancomycin, and are the two types that cause VRSA. PMID: 24983424
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Bacterial vancomycin resistance vanA gene
- Property
- PrThr
- Time
- Pt
- System
- Isolate/Specimen
- Scale
- Ord
- Method
- Molgen
Additional Names
- Short Name
- vanA Islt/Spm Ql
- Display Name
- Vancomycin resistance vanA gene Molgen Ql (Islt/Spec)
- Consumer Name Alpha Get Info
- Vancomycin resistance vanA gene
Basic Attributes
- Class
- ABXBACT
- Type
- Laboratory
- First Released
- Version 2.21
- Last Updated
- Version 2.73
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.; Removed parentheses from Component because the contents represent a gene name, not an acronym.; ; Updated System from "XXX" and Method from "Probe.amp.tar" according to the new, more sustainable model for LOINC molecular resistance terms [Approved by LOINC Laboratory Committee in June 2018].
- Order vs. Observation
- Both
- Common Test Rank Get Info
- 3783
Example Answer List LL360-9
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Positive Copyright http://snomed.info/sct ID:10828004 Positive (qualifier value) | LA6576-8 | ||
| Negative Copyright http://snomed.info/sct ID:260385009 Negative (qualifier value) | LA6577-6 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 104991-5 | Bacterial resistance panel |
| 76586-7 | ENT microorganism gene identification panel by NAA with probe detection |
| 92789-7 | Gram positive blood culture panel by NAA with probe detection in Positive blood culture |
| 99012-7 | Urinary tract pathogens panel - Urine by NAA with probe detection |
| 76585-9 | Wound microorganism gene identification panel by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Bakterielle Vancomycin-Resistenz vanA-Gen: |
| es-ES | Spanish (Spain) | Gen vanA: |
| es-MX | Spanish (Mexico) | Gen vanA de resistencia a la vancomicina bacteriana: |
| fr-CA | French (Canada) | Gène bactérien de résistance à la vancomycine vanA: |
| fr-FR | French (France) | Résistance bactérienne à la vancomycine vanA gène: |
| it-IT | Italian (Italy) | vanA, gene: Synonyms: Gene vanA Genetica molecolare Isolato o Campione Presenza o Soglia Punto nel tempo (episodio) Suscettibilità agli antibiotici |
| nl-NL | Dutch (Netherlands) | bacteriële vancomycineresistentie (vanA) gen: Synonyms: isolaat/specimen molgen |
| pt-BR | Portuguese (Brazil) | vanA gene: Synonyms: Vancomycin resistance gene; |
| zh-CN | Chinese (China) | 细菌万古霉素耐药 vanA 基因: Synonyms: 供检查用的材料; |
Third Party Copyright
This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.
This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.
Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to http://www.snomed.org/snomed-ct/get-snomed-ct or info@snomed.org<mailto:info@snomed.org>. This may incur a fee in SNOMED International non-Member countries.