Version 2.78

Term Description

Qualitative detection of targeted nucleic acid sequences in the Escherichia coli O157 rfbE gene in stool specimens by real-time PCR-based methods. This term was created for, but not limited in use to, the submitter's test kit, xTAG® Gastrointestinal Pathogen Panel (GPP).
Source: Regenstrief LOINC

Part Description

LP207314-8   Escherichia coli O157 rfbE gene
The rfbE gene in Escherichia coli (E coli) O157 encodes perosamine synthase and is the first O157 Shiga toxin-producing E coli (STEC) rfb locus to be cloned and sequenced. PMID: 8890241 The rfbE gene is used in PCR assays to distinguish serotype O157 from non-O157 STEC in a clinical specimens. PMID: 16480968 Although rfbE is specific for serotype O157, it does not distinguish between O157:H7 and O157:non-H7 strains. E. coli O157:H7 (enterohemorrhagic E. coli or EHEC) is a well-known food-borne pathogen. E. coli O157:non-H7 strains are not classified as EHEC and their clinical significance is less clear. Such non-H7 strains have been isolated from asymptomatic patients, patients with diarrhea, as well as food and environmental sources. PMID: 21876740 Source: Regenstrief LOINC

Fully-Specified Name

Component
Escherichia coli O157 rfbE gene
Property
PrThr
Time
Pt
System
Stool
Scale
Ord
Method
Probe.amp.tar

Additional Names

Short Name
EC O157 rfbE gene Stl Ql NAA+probe
Display Name
E. coli O157 rfbE gene NAA+probe Ql (Stl)
Consumer Name Alpha Get Info
Escherichia coli O157 rfbE gene, Stool

Example Answer List: LL360-9

Source: Regenstrief Institute
Answer Code Score Answer ID
PositiveCopyright http://snomed.info/sct ID:10828004 Positive (qualifier value) LA6576-8
NegativeCopyright http://snomed.info/sct ID:260385009 Negative (qualifier value) LA6577-6

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.73
Order vs. Observation
Both
Common Test Rank Get Info
12493

Member of these Panels

LOINC Long Common Name
79381-0 Gastrointestinal pathogens panel - Stool by NAA with probe detection

Language Variants Get Info

Tag Language Translation
de-DE German (Germany) Escherichia coli O157 rfbE-Gen:Nachweis oder Schwellenwert:Zeitpunkt:Stuhl:Ordinal:Zielfragmentamplifikation mit Sondendetektion
es-ES Spanish (Spain) Gen rfbE Escherichia coli O157:PrThr:Punto temporal:Heces:Ord:Sonda con amplificación dirigida
es-MX Spanish (Mexico) Gen rfbE de Escherichia coli O157:Presencia o umbral:Punto temporal:Heces:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-FR French (France) Escherichia coli O157 rfbE gène:Présence/Seuil:Ponctuel:Selle:Qualitatif:PCR amplification de cible
it-IT Italian (Italy) Escherichia coli geni O157 rfbE:PrThr:Pt:Feci:Ord:Sonda.amp.tar
Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NL Dutch (Netherlands) Escherichia coli O157 rfbE-gen:aanwezigheid:moment:feces:ordinaal:probe-detectie
Synonyms: escherichia coli O157 rfbE gen ontlasting; feces probe.amp.tar
zh-CN Chinese (China) 大肠埃希菌 O157 rfbE 基因:存在情况或阈值:时间点:大便:序数型:探针法.基因扩增.靶向
Synonyms: E coli;大肠埃希氏杆菌;大肠埃希氏菌;大肠杆菌 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 便;大肠运动;排便;粪便;肠运动 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 大肠埃希菌（E coli、大肠埃希氏杆菌、大肠埃希氏菌、大肠杆菌） O157 大肠埃希菌（E coli、大肠埃希氏杆菌、大肠埃希氏菌、大肠杆菌） O157 rfbE 基因 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 经过扩增的 脱氧核糖核酸探针 遗传基因;遗传因子;吉恩;生物基因

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CodeSystem lookup
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