81233-9
Influenza virus types A and B and subtypes RNA panel - Respiratory system specimen by NAA with probe detection
Active
81326-1 Human RNase P RNA [Cycle Threshold #] in Respiratory system specimen by NAA with probe detection
Term Description
Human RNase P is used as an internal control with human clinical specimens to confirm that nucleic acid was adequately extracted from. Possible specimens include: upper respiratory tract clinical specimens (including nasopharyngeal swabs, nasal swabs, throat swabs, nasal aspirates, nasal washes, and dual nasopharyngeal/throat swabs), and lower respiratory tract specimens (including bronchoalveolar lavage, bronchial wash, tracheal aspirate, sputum, and lung tissue.
Source: Regenstrief LOINC
Part Descriptions
LP135667-6 Human RNase P
Ribonuclease P (EC 3.1.26.5, RNase P) is a type of ribonuclease which cleaves RNA. RNase P is unique from other RNases in that it is a ribozyme - a ribonucleic acid that acts as a catalyst in the same way that a protein based enzyme would. Its function is to cleave off an extra, or precursor, sequence of RNA on tRNA molecules. Further, RNase P is one of two known multiple turnover ribozymes in nature (the other being the ribosome), the discovery of which earned Sidney Altman and Thomas Cech the Nobel Prize in Chemistry in 1989: in the 1970s, Altman discovered the existence of precursor tRNA with flanking sequences and was the first to characterize RNase P and its activity in processing of the 5' leader sequence of precursor tRNA. Recent findings also reveal that RNase P has a new function. It has been shown that human nuclear RNase P is required for the normal and efficient transcription of various small noncoding RNAs, such as tRNA, 5S rRNA, SRP RNA and U6 snRNA genes., which are transcribed by RNA polymerase III, one of three major nuclear RNA polymerases in human cells.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Wikipedia
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- Human RNase P RNA
- Property
- ThreshNum
- Time
- Pt
- System
- Respiratory System Specimen
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- Human RNase P RNA Ct Resp Qn NAA+probe
- Display Name
- Human RNase P RNA NAA+probe (Respiratory system specimen) [ThreshNum]
- Consumer Name Alpha Get Info
- Human RNase P, Respiratory system specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.75
- Change Reason
- Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
- Order vs. Observation
- Both
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 81233-9 | Influenza virus types A and B and subtypes RNA panel - Respiratory system specimen by NAA with probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| es-ES | Spanish (Spain) | Rnase P humana RNA: Synonyms: Cuantitativo Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio |
| es-MX | Spanish (Mexico) | ARN Rnasa P humana: |
| fr-FR | French (France) | Ribonucléase P ARN: |
| it-IT | Italian (Italy) | Rnasi P umana RNA: Synonyms: Campione da Apparato Respiratorio Limite di soglia Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| nl-NL | Dutch (Netherlands) | Humaan Rnase P RNA: Synonyms: probe.amp.tar systema respiratorium; |
| zh-CN | Chinese (China) | 人核糖核酸酶 P RNA: Synonyms: P 型 人核酶 P; |
Example Units
| Unit | Source |
|---|---|
| {Ct_value} | Example UCUM Units |
81308-9 Influenza virus A RNA [Cycle Threshold #] in Respiratory system specimen by NAA with probe detection
Part Descriptions
LP14239-5 Influenza virus A
Influenza viruses, from the family Orthomyxoviridae, are enveloped negative-strand RNA viruses with segmented genomes containing seven to eight gene segments. Of the five genera in the family, only influenza A virus (IAV), influenza B and C are medically relevant to humans. Aquatic birds harboring avian IAV are the likely natural reservoir for all known IAV subtypes and are probably the original source of all human pandemic IAV strains. IAV maintained in wild birds have been associated with stable host switch events to novel hosts, including most often to domestic poultry but also to horses, swine, toothed whales and humans. The influenza virus life cycle begins with the binding of viral HA to host cell receptors. Endocytosis and HA-mediated fusion of the viral and cellular membranes occurs. Viral ribonucleoprotein complexes are released into the cytoplasm, travel to the nucleus, then are replicated and transcribed by the viral polymerase complex. The new viruses are formed and bud when the newly formed ribonucleicprotein complexes and structural proteins reach the plasma membrane. Further research is needed to better understand how IAVs switch hosts and the viral genetic changes that underlie human adaptation. IAV causes respiratory infections in humans ranging from asymptomatic to fatal. Pandemics are attributed to "novel" viruses which possess a viral hemagglutinin (HA) to which humans do not have immunity. PMID: 20542248 ] PMID: 25812763
Influenza viruses A and B are single-stranded RNA enveloped viruses belonging to the Orthomyxoviridae family. The symptoms of infection of Influenza A and B include fever, cough, sore throat, rhinorrhea, nasal congestion, headache, myalgia and malaise. Some patients may experience gastrointestinal symptoms including watery diarrhea, vomiting and abdominal pain. The influenza viruses spread rapidly in enclosed spaces with a documented rate of infection of 70% following a common source of exposure. Infection occurs in the respiratory epithelium in both the upper and lower respiratory tract, and the virus can be found in many specimen types, including nasal aspirates, nasal or nasopharyngeal swabs, throat swabs, sputum and tracheal aspirates. When infection rates reach epidemic proportions, hospitalization of children and elderly patients rises as does the mortality rates of elderly patients.(Manual of Clinical Microbiology, 11th edition, James H. Jorgensen; Karen C. Carroll; Guido Funke; Michael A Pfaller; Marie Louise Landry; Sandra S. Richter; David W. Warnock)
Source: Regenstrief LOINC
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- Influenza virus A RNA
- Property
- ThreshNum
- Time
- Pt
- System
- Respiratory System Specimen
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- FLUAV RNA Ct Resp Qn NAA+probe
- Display Name
- FLUAV RNA NAA+probe (Respiratory system specimen) [ThreshNum]
- Consumer Name Alpha Get Info
- Influenza A (Flu A), Respiratory system specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.75
- Change Reason
- Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
- Order vs. Observation
- Both
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 81233-9 | Influenza virus types A and B and subtypes RNA panel - Respiratory system specimen by NAA with probe detection |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG32757-3 | Influenza virus |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Influenza-Virus A RNA: |
| es-MX | Spanish (Mexico) | ARN del virus de la influenza A: |
| es-ES | Spanish (Spain) | Virus Influenza A RNA: Synonyms: Cuantitativo Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio |
| fr-FR | French (France) | Influenza virus A ARN: |
| it-IT | Italian (Italy) | Influenza A, virus RNA: Synonyms: Campione da Apparato Respiratorio Limite di soglia Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza A |
| nl-NL | Dutch (Netherlands) | Influenzavirus A RNA: Synonyms: probe.amp.tar systema respiratorium; |
| zh-CN | Chinese (China) | 流感病毒 A 型 RNA: Synonyms: A 型 A 型流感; |
Example Units
| Unit | Source |
|---|---|
| {Ct_value} | Example UCUM Units |
81428-5 Influenza virus A H7 Eurasia RNA [Presence] in Respiratory system specimen by NAA with probe detection
Part Descriptions
LP208510-0 Influenza virus A H7 Eurasia
Human infections with a new avian influenza A (H7N9) virus were first reported in China in March 2013. Most of these infections are believed to result from exposure to infected poultry or contaminated environments, as H7N9 viruses have also been found in poultry in China. While some mild illnesses in human H7N9 cases have been seen, most patients have had severe respiratory illness, with about one-third resulting in death. Rare, limited person-to-person spread of this virus has been identified in China, but there is no evidence of sustained person-to-person spread of H7N9. The first case outside of China was in Malaysia and was reported on February 12, 2014. The case was detected in a traveler from an H7N9-affected area of China. The new H7N9 virus has not been detected in people or birds in the United States as of this writing.
Source: Centers for Disease Control and Prevention, CDC: Avian Influenza A (H7N9) Virus
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- Influenza virus A H7 Eurasia RNA
- Property
- PrThr
- Time
- Pt
- System
- Respiratory System Specimen
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- FLUAV H7 Euras RNA Resp Ql NAA+probe
- Display Name
- FLUAV H7 Euras RNA NAA+probe Ql (Respiratory system specimen)
- Consumer Name Alpha Get Info
- Influenza A H7 Eurasia, Respiratory system specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.75
- Change Reason
- Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
- Order vs. Observation
- Both
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 81233-9 | Influenza virus types A and B and subtypes RNA panel - Respiratory system specimen by NAA with probe detection |
| 92143-7 | Respiratory pathogens DNA and RNA panel - Respiratory system specimen by NAA with probe detection |
| 94499-1 | Respiratory viral pathogens DNA and RNA panel - Respiratory system specimen Qualitative by NAA with probe detection |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG32757-3 | Influenza virus |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Influenza-Virus A H7 Eurasien RNA: |
| es-MX | Spanish (Mexico) | Virus de la influenza A H7 Eurasia ARN: |
| es-ES | Spanish (Spain) | Virus Influenza A H7 Eurasia RNA: Synonyms: Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio |
| fr-FR | French (France) | Influenza virus A H7 Eurasie ARN: |
| it-IT | Italian (Italy) | Virus Influenza A H7 Eurasia RNA: Synonyms: Campione da Apparato Respiratorio Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza A Virus dell''influenza A H7 |
| nl-NL | Dutch (Netherlands) | Influenzavirus A H7 Eurasia RNA: Synonyms: probe.amp.tar systema respiratorium; |
| zh-CN | Chinese (China) | 流感病毒 A 型 H7 亚型欧亚株 RNA: Synonyms: A 型 A 型流感; |
81307-1 Influenza virus A H7 Eurasia RNA [Cycle Threshold #] in Respiratory system specimen by NAA with probe detection
Term Description
Possible specimens include: upper respiratory tract clinical specimens (including nasopharyngeal swabs, nasal swabs, throat swabs, nasal aspirates, nasal washes, and dual nasopharyngeal/throat swabs), and lower respiratory tract specimens (including bronchoalveolar lavage, bronchial wash, tracheal aspirate, sputum, and lung tissue.
Source: Regenstrief LOINC
Part Descriptions
LP208510-0 Influenza virus A H7 Eurasia
Human infections with a new avian influenza A (H7N9) virus were first reported in China in March 2013. Most of these infections are believed to result from exposure to infected poultry or contaminated environments, as H7N9 viruses have also been found in poultry in China. While some mild illnesses in human H7N9 cases have been seen, most patients have had severe respiratory illness, with about one-third resulting in death. Rare, limited person-to-person spread of this virus has been identified in China, but there is no evidence of sustained person-to-person spread of H7N9. The first case outside of China was in Malaysia and was reported on February 12, 2014. The case was detected in a traveler from an H7N9-affected area of China. The new H7N9 virus has not been detected in people or birds in the United States as of this writing.
Source: Centers for Disease Control and Prevention, CDC: Avian Influenza A (H7N9) Virus
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- Influenza virus A H7 Eurasia RNA
- Property
- ThreshNum
- Time
- Pt
- System
- Respiratory System Specimen
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- FLUAV H7 Euras RNA Ct Resp Qn NAA+probe
- Display Name
- FLUAV H7 Euras RNA NAA+probe (Respiratory system specimen) [ThreshNum]
- Consumer Name Alpha Get Info
- Influenza A H7 Eurasia, Respiratory system specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.75
- Change Reason
- Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
- Order vs. Observation
- Both
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 81233-9 | Influenza virus types A and B and subtypes RNA panel - Respiratory system specimen by NAA with probe detection |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG32757-3 | Influenza virus |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Influenza-Virus A H7 Eurasien RNA: |
| es-MX | Spanish (Mexico) | Virus de la influenza A H7 Eurasia ARN: |
| es-ES | Spanish (Spain) | Virus Influenza A H7 Eurasia RNA: Synonyms: Cuantitativo Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio |
| fr-FR | French (France) | Influenza virus A H7 Eurasie ARN: |
| it-IT | Italian (Italy) | Virus Influenza A H7 Eurasia RNA: Synonyms: Campione da Apparato Respiratorio Limite di soglia Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza A Virus dell''influenza A H7 |
| nl-NL | Dutch (Netherlands) | Influenzavirus A H7 Eurasia RNA: Synonyms: probe.amp.tar systema respiratorium; |
| zh-CN | Chinese (China) | 流感病毒 A 型 H7 亚型欧亚株 RNA: Synonyms: A 型 A 型流感; |
Example Units
| Unit | Source |
|---|---|
| {Ct_value} | Example UCUM Units |
81321-2 Influenza virus A H5 Asian RNA [Cycle Threshold #] in Respiratory system specimen by Nucleic acid amplification using primer-probe set H5b
Term Description
This term represents the identification of the Influenza A H5 subtype based on the H5b probe and primer set provided by the Centers for Disease Control and Prevention. "H5b" does not refer to a more specific type of the H5 virus, rather it is the name of one of the two primer and probe sets (the other is H5a) that are used to detect the Influenza A H5 subtype. For presumptive positive identification of the H5 subtype, results for both the H5a and H5b assays should be positive. If one is positive and one is negative, the result is inconclusive for the H5 subtype.
Possible specimens include: upper respiratory tract clinical specimens (including nasopharyngeal swabs, nasal swabs, throat swabs, nasal aspirates, nasal washes, and dual nasopharyngeal/throat swabs), and lower respiratory tract specimens (including bronchoalveolar lavage, bronchial wash, tracheal aspirate, sputum, and lung tissue.
Source: Regenstrief LOINC
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- Influenza virus A H5 Asian RNA
- Property
- ThreshNum
- Time
- Pt
- System
- Respiratory System Specimen
- Scale
- Qn
- Method
- Probe.amp.tar.primer-probe set H5b
Additional Names
- Short Name
- FLUAV H5 Asian RNA Ct Resp Qn NAA H5b
- Display Name
- FLUAV H5 Asian RNA NAA+probe primer-probe set H5b (Respiratory system specimen) [ThreshNum]
- Consumer Name Alpha Get Info
- Influenza A H5 Asian, Respiratory system specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.75
- Change Reason
- Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
- Order vs. Observation
- Both
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 81233-9 | Influenza virus types A and B and subtypes RNA panel - Respiratory system specimen by NAA with probe detection |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG32757-3 | Influenza virus |
| LG34153-3 | Influenza virus A H5 Asian RNA| |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Influenza-Virus A H5 asiatisch RNA: |
| es-ES | Spanish (Spain) | Hemaglutinina del virus de la gripe asiática A H5 RNA: Synonyms: Cuantitativo Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio |
| es-MX | Spanish (Mexico) | ARN asiático del virus de la influenza A H5: |
| fr-FR | French (France) | Influenza virus A H5 asie ARN: |
| it-IT | Italian (Italy) | Influenza virus A H5 Asiatica RNA: Synonyms: Campione da Apparato Respiratorio Limite di soglia Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda con amplificazione target usando set primer- Sonda di DNA Virus dell''influenza Virus dell''influenza A Virus dell''influenza A H5 Virus dell''influenza A H5 Asiatica |
| zh-CN | Chinese (China) | 流感病毒 A 型血凝素 H5 型亚洲亚型 RNA: Synonyms: A 型 A 型流感; |
Example Units
| Unit | Source |
|---|---|
| {Ct_value} | Example UCUM Units |
81320-4 Influenza virus A H5 Asian RNA [Cycle Threshold #] in Respiratory system specimen by Nucleic acid amplification using primer-probe set H5a
Term Description
This term represents the identification of the Influenza A H5 subtype based on the H5a probe and primer set provided by the Centers for Disease Control and Prevention. "H5a" does not refer to a more specific type of the H5 virus, rather it is the name of one of the two primer and probe sets (the other is H5b) that are used to detect the Influenza A H5 subtype. For presumptive positive identification of the H5 subtype, results for both the H5a and H5b assays should be positive. If one is positive and one is negative, the result is inconclusive for the H5 subtype.
Possible specimens include: upper respiratory tract clinical specimens (including nasopharyngeal swabs, nasal swabs, throat swabs, nasal aspirates, nasal washes, and dual nasopharyngeal/throat swabs), and lower respiratory tract specimens (including bronchoalveolar lavage, bronchial wash, tracheal aspirate, sputum, and lung tissue.)
Source: Regenstrief LOINC
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- Influenza virus A H5 Asian RNA
- Property
- ThreshNum
- Time
- Pt
- System
- Respiratory System Specimen
- Scale
- Qn
- Method
- Probe.amp.tar.primer-probe set H5a
Additional Names
- Short Name
- FLUAV H5 Asian RNA Ct Resp Qn NAA H5a
- Display Name
- FLUAV H5 Asian RNA NAA+probe primer-probe set H5a (Respiratory system specimen) [ThreshNum]
- Consumer Name Alpha Get Info
- Influenza A H5 Asian, Respiratory system specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.75
- Change Reason
- Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
- Order vs. Observation
- Both
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 81233-9 | Influenza virus types A and B and subtypes RNA panel - Respiratory system specimen by NAA with probe detection |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG32757-3 | Influenza virus |
| LG34153-3 | Influenza virus A H5 Asian RNA| |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Influenza-Virus A H5 asiatisch RNA: |
| es-ES | Spanish (Spain) | Hemaglutinina del virus de la gripe asiática A H5 RNA: Synonyms: Cuantitativo Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio |
| es-MX | Spanish (Mexico) | ARN asiático del virus de la influenza A H5: |
| fr-FR | French (France) | Influenza virus A H5 asie ARN: |
| it-IT | Italian (Italy) | Influenza virus A H5 Asiatica RNA: Synonyms: Campione da Apparato Respiratorio Limite di soglia Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda con amplificazione target usando set primer- Sonda di DNA Virus dell''influenza Virus dell''influenza A Virus dell''influenza A H5 Virus dell''influenza A H5 Asiatica |
| zh-CN | Chinese (China) | 流感病毒 A 型血凝素 H5 型亚洲亚型 RNA: Synonyms: A 型 A 型流感; |
Example Units
| Unit | Source |
|---|---|
| {Ct_value} | Example UCUM Units |
81305-5 Influenza virus A H1 2009 pandemic RNA [Cycle Threshold #] in Respiratory system specimen by NAA with probe detection
Term Description
Possible specimens include: upper respiratory tract clinical specimens (including nasopharyngeal swabs, nasal swabs, throat swabs, nasal aspirates, nasal washes, and dual nasopharyngeal/throat swabs), and lower respiratory tract specimens (including bronchoalveolar lavage, bronchial wash, tracheal aspirate, sputum, and lung tissue.
Source: Regenstrief LOINC
Part Descriptions
LP94776-9 Influenza virus A H1 2009 pandemic
An influenza virus that had never been identified as a cause of infections in people before the 2009 H1N1 (Swine flu) pandemic. Genetic analyses of this virus showed that it originated from animal influenza viruses and was unrelated to the human seasonal H1N1 viruses that had been in general circulation among people since 1977. Antibodies to the seasonal H1N1 virus did not protect against the pandemic H1N1 virus, however a significant percentage of people age 65 and older had some immunity against the pandemic virus. After early outbreaks in North America in April 2009 the new influenza virus spread rapidly around the world. Unlike typical seasonal flu patterns, the new virus caused high levels of summer infections in the northern hemisphere, and then even higher levels of activity during cooler months. The virus also led to patterns of death and illness not normally seen in influenza infections. Most of the deaths occurred among younger people, including those who were otherwise healthy.
Source: Regenstrief LOINC, WHO: What is the pandemic (H1N1) 2009 virus?
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- Influenza virus A H1 2009 pandemic RNA
- Property
- ThreshNum
- Time
- Pt
- System
- Respiratory System Specimen
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- FLUAV H1 2009 pan RNA Ct Resp Qn NAA+pr
- Display Name
- FLUAV H1 2009 pand RNA NAA+probe (Respiratory system specimen) [ThreshNum]
- Consumer Name Alpha Get Info
- Influenza A H1 2009 Pand, Respiratory system specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.75
- Change Reason
- Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
- Order vs. Observation
- Both
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 81233-9 | Influenza virus types A and B and subtypes RNA panel - Respiratory system specimen by NAA with probe detection |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG32757-3 | Influenza virus |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Influenza-Virus A H1 (Pandemie 2009) RNA: |
| es-ES | Spanish (Spain) | Hemaglutinina H1 del virus Influenza A de origen porcino RNA: Synonyms: Cuantitativo Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio |
| es-MX | Spanish (Mexico) | ARN pandémico del virus de la influenza A H1 2009: |
| fr-FR | French (France) | Influenza virus A H1N1(2009) ARN: |
| it-IT | Italian (Italy) | Influenza A H1 2009 pandemica, virus RNA: Synonyms: Campione da Apparato Respiratorio Limite di soglia Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza A Virus dell''influenza A H1 Virus dell''influenza A H1 2009 pandemica |
| nl-NL | Dutch (Netherlands) | Influenzavirus A H1 2009 pandemisch RNA: Synonyms: probe.amp.tar systema respiratorium; |
| zh-CN | Chinese (China) | 流感病毒 A 型血凝素 H1 型 2009 大流行 RNA: Synonyms: A 型 A 型流感; |
Example Units
| Unit | Source |
|---|---|
| {Ct_value} | Example UCUM Units |
81309-7 Influenza virus B RNA [Cycle Threshold #] in Respiratory system specimen by NAA with probe detection
Part Descriptions
LP14240-3 Influenza virus B
Influenza virus from the family Orthomyxoviridae are enveloped negative-strand RNA viruses with segmented genomes containing seven to eight gene segments. Of the five genera in the family, only influenza A virus (IAV), influenza B and C viruses are medically relevant to humans. Influenza A and B viruses have a similar structure whereby these viruses each contain eight discrete single-stranded RNA gene segments, each encoding at least one protein. While having a close phylogenetic relationship, influenza virus types A and B manifest very differently. While IAV infects birds, humans and other mammals, influenza B only infects humans and seals. Although both viruses cause human respiratory infection seasonally in temperate climate regions and more continually in the tropics, influenza B is normally less prevalent and causes less severe disease than IAV viruses. Research is ongoing to determine the evolutionary and epidemiological factors that shape the genetic diversity of influenza B virus. PMID: 25812763 [CDC:flu/about/viruses/types]
Source: Regenstrief LOINC
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- Influenza virus B RNA
- Property
- ThreshNum
- Time
- Pt
- System
- Respiratory System Specimen
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- FLUBV RNA Ct Resp Qn NAA+probe
- Display Name
- FLUBV RNA NAA+probe (Respiratory system specimen) [ThreshNum]
- Consumer Name Alpha Get Info
- Influenza B (Flu B), Respiratory system specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.75
- Change Reason
- Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
- Order vs. Observation
- Both
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 81233-9 | Influenza virus types A and B and subtypes RNA panel - Respiratory system specimen by NAA with probe detection |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG32757-3 | Influenza virus |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Influenza-Virus B RNA: |
| es-ES | Spanish (Spain) | Virus Influenza B RNA: Synonyms: Cuantitativo Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio |
| es-MX | Spanish (Mexico) | ARN del virus de la influenza B: |
| fr-FR | French (France) | Influenza virus B ARN: |
| it-IT | Italian (Italy) | Influenza B, virus RNA: Synonyms: Campione da Apparato Respiratorio Limite di soglia Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza B |
| nl-NL | Dutch (Netherlands) | Influenzavirus B RNA: Synonyms: probe.amp.tar systema respiratorium; |
| zh-CN | Chinese (China) | 流感病毒 B 型 RNA: Synonyms: B 型 B 型流感; |
Example Units
| Unit | Source |
|---|---|
| {Ct_value} | Example UCUM Units |
81325-3 Influenza virus B Yamagata lineage RNA [Cycle Threshold #] in Respiratory system specimen by NAA with probe detection
Part Descriptions
LP182338-6 Influenza virus B Yamagata lineage
Influenza B viruses can be separated into two major lineages, B/Victoria and B/Yamagata. Recent studies have shown that the two major lineages may differ in terms of epidemiology and risk of secondary infection. One study found that patients with confirmed influenza B Victoria lineage infections were significantly younger compared to patients infected with the Yamagata lineage. PMID: 25034374 A separate study found that Victoria-lineage viruses were associated with a significantly higher risk of secondary infection among patients' household contacts who were 15 years old or younger than among those older than 15, but the same did not hold true for Yamagata-lineage viruses. PMID: 26400854 Studies have also shown that genetically distinct lineages like B/Victoria/2/87 can cocirculate in the population and that the reassortment among these strains plays a role in generating the genetic diversity of influenza B viruses. PMID: 16891481
Source: Regenstrief LOINC
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- Influenza virus B Yamagata lineage RNA
- Property
- ThreshNum
- Time
- Pt
- System
- Respiratory System Specimen
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- FLUBV Yam RNA Ct Resp Qn NAA+probe
- Display Name
- FLUBV Yam RNA NAA+probe (Respiratory system specimen) [ThreshNum]
- Consumer Name Alpha Get Info
- Influenza B Yam, Respiratory system specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.75
- Change Reason
- Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
- Order vs. Observation
- Both
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 81233-9 | Influenza virus types A and B and subtypes RNA panel - Respiratory system specimen by NAA with probe detection |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG32757-3 | Influenza virus |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Influenza-Virus B Yamagata-Abstammungslinie RNA: |
| es-MX | Spanish (Mexico) | ARN del linaje Yamagata del virus de la influenza B: |
| es-ES | Spanish (Spain) | Linaje Virus Influenza B Yamagata RNA: Synonyms: Cuantitativo Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio |
| fr-FR | French (France) | Influenza virus B lignée Yamagata ARN: |
| it-IT | Italian (Italy) | Influenza B, virus RNA: Synonyms: Campione da Apparato Respiratorio Limite di soglia Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza B |
| nl-NL | Dutch (Netherlands) | Influenzavirus B Yamagata lineage RNA: Synonyms: probe.amp.tar systema respiratorium; |
| zh-CN | Chinese (China) | 流感病毒 B 型 Yamagata 谱系 RNA: Synonyms: B 型 B 型流感; |
Example Units
| Unit | Source |
|---|---|
| {Ct_value} | Example UCUM Units |
81327-9 Influenza virus B Victoria lineage RNA [Cycle Threshold #] in Respiratory system specimen by NAA with probe detection
Part Descriptions
LP182335-2 Influenza virus B Victoria lineage
Influenza B viruses can be separated into two major lineages, B/Victoria and B/Yamagata. Recent studies have shown that the two major lineages may differ in terms of epidemiology and risk of secondary infection. One study found that patients with confirmed influenza B Victoria lineage infections were significantly younger compared to patients infected with the Yamagata lineage. PMID: 25034374 A separate study found that Victoria-lineage viruses were associated with a significantly higher risk of secondary infection among patients' household contacts who were 15 years old or younger than among those older than 15, but the same did not hold true for Yamagata-lineage viruses. PMID: 26400854 Studies have also shown that genetically distinct lineages like B/Victoria/2/87 can cocirculate in the population and that the reassortment among these strains plays a role in generating the genetic diversity of influenza B viruses. PMID: 16891481
Source: Regenstrief LOINC
LP182336-0 Influenza virus B Victoria lineage RNA
Influenza B viruses can be separated into two major lineages, B/Victoria and B/Yamagata. Recent studies have shown that the two major lineages may differ in terms of epidemiology and risk of secondary infection. One study found that patients with confirmed influenza B Victoria lineage infections were significantly younger compared to patients infected with the Yamagata lineage. PMID: 25034374 A separate study found that Victoria-lineage viruses were associated with a significantly higher risk of secondary infection among patients' household contacts who were 15 years old or younger than among those older than 15, but the same did not hold true for Yamagata-lineage viruses. PMID: 26400854
Source: Regenstrief LOINC
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- Influenza virus B Victoria lineage RNA
- Property
- ThreshNum
- Time
- Pt
- System
- Respiratory System Specimen
- Scale
- Qn
- Method
- Probe.amp.tar
Additional Names
- Short Name
- FLUBV Vic RNA Ct Resp Qn NAA+probe
- Display Name
- FLUBV Vic RNA NAA+probe (Respiratory system specimen) [ThreshNum]
- Consumer Name Alpha Get Info
- Influenza B Vic, Respiratory system specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.75
- Change Reason
- Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
- Order vs. Observation
- Both
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 81233-9 | Influenza virus types A and B and subtypes RNA panel - Respiratory system specimen by NAA with probe detection |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG32757-3 | Influenza virus |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Influenza-Virus B Victoria-Abstammungslinie RNA: |
| es-ES | Spanish (Spain) | Linaje Virus Influenza B Victoria RNA: Synonyms: Cuantitativo Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio |
| es-MX | Spanish (Mexico) | ARN del linaje Victoria del virus de la influenza B: |
| fr-FR | French (France) | Influenza virus B lignée Victoria ARN: |
| it-IT | Italian (Italy) | Influenza B, virus RNA: Synonyms: Campione da Apparato Respiratorio Limite di soglia Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza B |
| nl-NL | Dutch (Netherlands) | Influenzavirus B Victoria lineage RNA: Synonyms: probe.amp.tar systema respiratorium; |
| zh-CN | Chinese (China) | 流感病毒 B 型 Victoria 谱系 RNA: Synonyms: B 型 B 型流感; |
Example Units
| Unit | Source |
|---|---|
| {Ct_value} | Example UCUM Units |