81306-3
Variables that apply to the overall study
Trial
53577-3 Reason for study
Term Description
The freeform text that is entered by the ordering provider to further annotate the coded Reason for Study [LOINC: 51967-8] associated with an ordered test. In HL7 v2 messages, OBR-31 should be used to report the reason for study.
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- Reason for study additional note
- Property
- Txt
- Time
- Pt
- System
- Bld/Tiss
- Scale
- Nar
- Method
- Molgen
Basic Attributes
- Class
- HL7.GENETICS
- Type
- Laboratory
- First Released
- Version 2.26
- Last Updated
- Version 2.73 (MIN)
- Change Reason
- Updated LCN per CJM for HL7 CG IG
- Order vs. Observation
- Both
- Common Test Rank Get Info
- 12562
HL7® Attributes
HL7® Field ID- OBR-31
Member of these Panels
LOINC | Long Common Name |
---|---|
55233-1 | Genetic analysis master panel |
81247-9 | Master HL7 genetic variant reporting panel |
51962-9 | Pharmacogenetic DNA analysis panel |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Λόγος συμπληρωματικής σημείωσης μελέτης: Synonyms: Txt Λόγος μελέτης Λόγος συμπληρωματικής σημείωσης μελέτης Μελέτη Σημείωση |
es-ES | Spanish (Spain) | Razón para el estudio de notas complementarias: |
es-MX | Spanish (Mexico) | Razón del estudio nota adicional: |
fr-FR | French (France) | Contexte de l'étude note complémentaire: |
it-IT | Italian (Italy) | Motivo di ulteriore approfondimento: Synonyms: Genetica molecolare Punto nel tempo (episodio) Referto clinico di test genetico Sangue Sangue o Tessuto Tessuto & |
nl-NL | Dutch (Netherlands) | reden voor onderzoek aanvullende aantekening: Synonyms: molgen |
pt-BR | Portuguese (Brazil) | Apontamentos da razão de estudo adicional: Synonyms: Text; |
ru-RU | Russian (Russian Federation) | Причина исследования дополнительная запись: Synonyms: Кровь Кровь или Ткань Мотивировка исследования; |
tr-TR | Turkish (Turkey) | Sebep ek not çalışma için: |
zh-CN | Chinese (China) | 关于检查的原因 附加记录: Synonyms: HL7 遗传学 全血或组织; |
51967-8 Genetic disease assessed [ID]
Term Description
Coded identifier of the disorder being assessed but with exception to allow the recording of something not included in the controlled vocabulary that is being used. Various coding systems may be used, including ICD-9-CM, ICD-10-CM, SCT and NCBI MedGen.
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- Genetic disease assessed
- Property
- ID
- Time
- Pt
- System
- Bld/Tiss
- Scale
- Nom
- Method
- Molgen
Basic Attributes
- Class
- HL7.GENETICS
- Type
- Laboratory
- First Released
- Version 2.24
- Last Updated
- Version 2.58 (MIN)
- Order vs. Observation
- Observation
Member of these Panels
LOINC | Long Common Name |
---|---|
62389-2 | Chromosome analysis master panel |
55233-1 | Genetic analysis master panel |
51966-0 | Genetic disease DNA analysis panel |
81247-9 | Master HL7 genetic variant reporting panel |
74028-2 | Virtual Medical Record for Clinical Decision Support panel HL7.VMR-CDS |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Αξιολογούμενη γενετική νόσος: Synonyms: Αναγνωριστικό Αξιολογηθείσα νόσος Αξιολογούμενη γενετική νόσος |
es-ES | Spanish (Spain) | Valoracion de enfermedades geneticas: |
es-MX | Spanish (Mexico) | Enfermedad genética evaluada: |
fr-FR | French (France) | Maladie génétique étudiée: |
it-IT | Italian (Italy) | Malattia genetica valutata: Synonyms: Genetica molecolare Identificatore Punto nel tempo (episodio) Referto clinico di test genetico Sangue Sangue o Tessuto Tessuto & |
nl-NL | Dutch (Netherlands) | genetische ziekte onderzocht: Synonyms: molgen |
pt-BR | Portuguese (Brazil) | Doenças genéticas avaliadas: Synonyms: ; |
ru-RU | Russian (Russian Federation) | Генетические заболевания исследование: Synonyms: Идентификатор Кровь Кровь или Ткань Номинальный; |
tr-TR | Turkish (Turkey) | Genetik hastalık değerlendirilmiş: |
zh-CN | Chinese (China) | 已评估的遗传性疾病: Synonyms: HL7 遗传学 全血或组织; |
51963-7 Medication assessed [ID]
Term Description
A coded medication assessed in a pharmacogenic test (recommend RxNorm)
Observation Required in Panel
Conditional
Fully-Specified Name
- Component
- Medication assessed
- Property
- ID
- Time
- Pt
- System
- Bld/Tiss
- Scale
- Nom
- Method
- Molgen
Basic Attributes
- Class
- HL7.GENETICS
- Type
- Laboratory
- First Released
- Version 2.24
- Last Updated
- Version 2.58 (MIN)
- Order vs. Observation
- Observation
Member of these Panels
LOINC | Long Common Name |
---|---|
55233-1 | Genetic analysis master panel |
81247-9 | Master HL7 genetic variant reporting panel |
51962-9 | Pharmacogenetic DNA analysis panel |
78046-0 | Pharmacogenomic analysis basic associated observations panel - Blood or Tissue |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Αξιολογούμενη φαρμακευτική αγωγή: Synonyms: Αναγνωριστικό Αξιολογούμενη φαρμακευτική αγωγή Φαρμακευτική αγωγή |
es-ES | Spanish (Spain) | Medicacion evaluada: |
es-MX | Spanish (Mexico) | Medicación evaluada: |
fr-FR | French (France) | Médication étudiée: |
it-IT | Italian (Italy) | Farmaco valutato: Synonyms: Genetica molecolare Identificatore Punto nel tempo (episodio) Referto clinico di test genetico Sangue Sangue o Tessuto Tessuto & |
pt-BR | Portuguese (Brazil) | Medicação avaliada: Synonyms: Identifier; |
ru-RU | Russian (Russian Federation) | Лекарственное лечение оценка: Synonyms: Идентификатор Кровь Кровь или Ткань Номинальный; |
tr-TR | Turkish (Turkey) | Nedikasyon değerlendirilmiş: |
zh-CN | Chinese (China) | 已评估的药物: Synonyms: HL7 遗传学 全血或组织; |
48018-6 Gene studied [ID]
Term Description
HUGO Gene Nomenclature Committee (HGNC) identifier for a gene. List the gene(s) examined in full or in part by the study. If the study addresses multiple genes, these can be recorded in one OBX as a list seperated by repeat delimiters or in mulltiple OBX's with one gene per OBX. The recommended coding system will use the HGNC gene symbol as the display text and HGNC gene ID as the code. For example, 21497^ACAD9^HGNC.
Observation Required in Panel
Conditional
Fully-Specified Name
- Component
- Gene identifier
- Property
- ID
- Time
- Pt
- System
- Bld/Tiss
- Scale
- Nom
- Method
Basic Attributes
- Class
- HL7.GENETICS
- Type
- Laboratory
- First Released
- Version 2.21
- Last Updated
- Version 2.73 (MIN)
- Order vs. Observation
- Observation
- Common Test Rank Get Info
- 9796
Member of these Panels
LOINC | Long Common Name |
---|---|
77313-5 | DNA analysis discrete sequence variation basic associated observations panel - Blood or Tissue by Molecular genetics method |
53042-8 | DNA marker assessed panel |
53044-4 | DNA marker identified panel |
51960-3 | DNA marker results panel |
55233-1 | Genetic analysis master panel |
48015-2 | Individual allele panel |
51975-1 | Individual allele results panel |
81247-9 | Master HL7 genetic variant reporting panel |
78046-0 | Pharmacogenomic analysis basic associated observations panel - Blood or Tissue |
102118-7 | Rhabdomyolysis and Metabolic myopathy multigene panel - Blood or Tissue by Molecular genetics method |
48014-5 | Sequence variation panel - Blood or Tissue by Molecular genetics method |
48017-8 | Sequencing methodology panel - Blood or Tissue by Molecular genetics method |
102119-5 | Skeletal muscle channelopathy multigene panel - Blood or Tissue by Molecular genetics method |
74028-2 | Virtual Medical Record for Clinical Decision Support panel HL7.VMR-CDS |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Αναγνωριστικό γονιδίου: Synonyms: Αναγνωριστικό Αναγνωριστικό γονιδίου Γονίδιο |
es-ES | Spanish (Spain) | Identificador genético: |
es-MX | Spanish (Mexico) | Identificador de gen estudiado: |
fr-FR | French (France) | Gène identifiant: |
it-IT | Italian (Italy) | Gene, identificatore: Synonyms: Identificatore Identificatore del gene Punto nel tempo (episodio) Referto clinico di test genetico Sangue Sangue o Tessuto Tessuto & |
nl-NL | Dutch (Netherlands) | gen-identificator: |
pt-BR | Portuguese (Brazil) | Identificação do gene: Synonyms: ; |
ru-RU | Russian (Russian Federation) | Ген идентификатор: Synonyms: Идентификатор Кровь Кровь или Ткань Номинальный; |
tr-TR | Turkish (Turkey) | Gen tanımlayıcı: |
zh-CN | Chinese (China) | 基因标识符: Synonyms: HL7 遗传学 全血或组织; |
36908-2 Gene mutations tested for in Blood or Tissue by Molecular genetics method Nominal
Term Description
For targeted mutation analysis, report the discrete mutations the study is designed to detect. In HL7 V2 they can be reported in one observation as a list separated by repeat delimiters OR as a series of separate OBX segments, one per mutation tested for. In FHIR, multiple coded entries can not be reported as a list in one observation value field. They must be reported as the values of separate observations.
Condition for Inclusion
Either the mutations tested or the range(s) of DNA sequences examined (as structured or narrative data) should be included.
Observation Required in Panel
Conditional
Fully-Specified Name
- Component
- Gene mutations tested for
- Property
- Prid
- Time
- Pt
- System
- Bld/Tiss
- Scale
- Nom
- Method
- Molgen
Basic Attributes
- Class
- MOLPATH.MUT
- Type
- Laboratory
- First Released
- Version 2.13
- Last Updated
- Version 2.73 (MIN)
- Change Reason
- Changed Component from "Gene XXX mutations tested for" to "Gene mutations tested for" to make it more clear that the mutations tested for are the subject of this concept rather than the gene, and removing "XXX" does not change the meaning of this term.
- Order vs. Observation
- Observation
- Common Test Rank Get Info
- 7918
Member of these Panels
LOINC | Long Common Name |
---|---|
77313-5 | DNA analysis discrete sequence variation basic associated observations panel - Blood or Tissue by Molecular genetics method |
81247-9 | Master HL7 genetic variant reporting panel |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Γονίδιο εξετασθείσες μεταλλάξεις: Synonyms: Prid Γονίδιο Μεταλλάξεις |
es-AR | Spanish (Argentina) | gen XXX: |
es-ES | Spanish (Spain) | Gen Análisis de mutaciones para...: |
es-MX | Spanish (Mexico) | Mutaciones genéticas probadas: |
fr-FR | French (France) | Gène mutations recherchées: |
fr-CA | French (Canada) | Gène, Mutations testées: |
it-IT | Italian (Italy) | Gene, mutazioni testate per: Synonyms: Genetica molecolare Mutazione genica Patologia molecolare Presenza o Identità Punto nel tempo (episodio) Sangue Sangue o Tessuto Tessuto & |
ko-KR | Korean (Korea, Republic Of) | 유전자 XXX 돌연변이 검사용: |
nl-NL | Dutch (Netherlands) | gen geteste mutaties: Synonyms: molgen |
pt-BR | Portuguese (Brazil) | Gene XXX teste para mutação do gene: Synonyms: Identity or presence; |
tr-TR | Turkish (Turkey) | Gen mutasyonlar, test edilen: |
zh-CN | Chinese (China) | 基因 已测试的突变: Synonyms: 全血或组织; |
51959-5 Range(s) of DNA sequence examined
Term Description
This term is used to report the region(s) of interest for sequencing studies as one or more numeric ranges that identify the parts of the reference sequence that are sequenced. These can be recorded as one or more HL7 numeric ranges using repeat delimiters to seperate multiple such ranges. They can also be recorded singly, one per OBX, using OBX-4 to distinguish these repeats with the same Observation ID. However, such detailed specification of the sequencing region of interest is rare, in part because this information is often proprietary, and the region of interest is reported as a text description instead, e.g., "Sequenced all of the coding, and appropriate flanking regions," using [LOINC: 81293-3].
Condition for Inclusion
Either the mutations tested or the range(s) of DNA sequences examined (as structured or narrative data) should be included.
Observation Required in Panel
Conditional
Fully-Specified Name
- Component
- DNA region of interest
- Property
- NumRange
- Time
- Pt
- System
- Bld/Tiss
- Scale
- Nom
- Method
- Molgen
Basic Attributes
- Class
- HL7.GENETICS
- Type
- Laboratory
- First Released
- Version 2.24
- Last Updated
- Version 2.58 (MIN)
- Change Reason
- Changed Property from ID to NumRange to clarify the meaning of the concept as the range(s) of DNA sequences examined.; Updated LCN per CJM for HL7 CG IG
- Order vs. Observation
- Observation
Member of these Panels
LOINC | Long Common Name |
---|---|
81247-9 | Master HL7 genetic variant reporting panel |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Περιοχή ενδιαφέροντος DNA: Synonyms: DNA NumRange Περιοχή Περιοχή ενδιαφέροντος Περιοχή ενδιαφέροντος DNA |
es-ES | Spanish (Spain) | Region de interes del ADN: |
es-MX | Spanish (Mexico) | Región de ADN de interés: |
fr-FR | French (France) | ADN région d'intérêt: |
it-IT | Italian (Italy) | DNA, regione di interesse: Synonyms: Genetica molecolare Punto nel tempo (episodio) Referto clinico di test genetico Regione di interesse del DNA Sangue Sangue o Tessuto Tessuto & |
pt-BR | Portuguese (Brazil) | DNA região de interesse: Synonyms: ; |
zh-CN | Chinese (China) | DNA 兴趣区域: Synonyms: HL7 遗传学 全血或组织; |
81293-3 Description of ranges of DNA sequences examined
Term Description
This term is used to report a narrative description of the range(s) of DNA sequences examined in this sequencing study. Genetic test reports only rarely include explicit numeric ranges (which would be reported using [LOINC: 51959-5]) beause they are often proprietary, and more often describe the regions examined in narrative. For example, "all coding regions and appropriate flanking regions." To report the region of interest (e.g., in terms of introns and exons) rather than the specific DNA sequences examined, [LOINC: 47999-8] may be used.
Condition for Inclusion
Either the mutations tested or the range(s) of DNA sequences examined (as structured or narrative data) should be included.
Observation Required in Panel
Conditional
Fully-Specified Name
- Component
- Range(s) of DNA sequences examined
- Property
- Txt
- Time
- Pt
- System
- ^Patient
- Scale
- Nar
- Method
Basic Attributes
- Class
- MOLPATH
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.58 (MIN)
- Order vs. Observation
- Observation
Member of these Panels
LOINC | Long Common Name |
---|---|
81247-9 | Master HL7 genetic variant reporting panel |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Εύρος(η) εξεταζόμενων αλληλουχιών DNA: Synonyms: DNA S Txt Εύρος(η) εξεταζόμενων αλληλουχιών DNA |
es-MX | Spanish (Mexico) | Rango (s) de secuencias de ADN examinadas: |
es-ES | Spanish (Spain) | Rango (s) de secuencias de ADN examinadas: |
fr-FR | French (France) | ADN séquences examinés: |
it-IT | Italian (Italy) | Range(s) delle sequenze di DNA esaminato: Synonyms: Patologia molecolare paziente Punto nel tempo (episodio) Testo |
zh-CN | Chinese (China) | 所检查 DNA 序列范围: Synonyms: DNA 序列检查范围; |
51968-6 Discrete variation analysis overall interpretation
Term Description
Interpretation of all identified DNA Markers and/or Individual Alleles along with any known clinical information for the benefit of aiding clinicians in understanding the results overall. This is used for Symptomatic or Asymptomatic testing other than Carrier testing.
Observation Required in Panel
Required
Fully-Specified Name
- Component
- Genetic disease analysis overall interpretation
- Property
- Imp
- Time
- Pt
- System
- Bld/Tiss
- Scale
- Nom
- Method
- Molgen
Basic Attributes
- Class
- HL7.GENETICS
- Type
- Laboratory
- First Released
- Version 2.24
- Last Updated
- Version 2.73 (MIN)
- Change Reason
- Updated LCN per CJM for HL7 CG IG
- Order vs. Observation
- Observation
- Common Test Rank Get Info
- 8725
Preferred Answer List LL541-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Positive Copyright http://snomed.info/sct ID:10828004 Positive (qualifier value) | LA6576-8 | ||
Negative Copyright http://snomed.info/sct ID:260385009 Negative (qualifier value) | LA6577-6 | ||
Inconclusive Copyright http://snomed.info/sct ID:419984006 Inconclusive (qualifier value) | LA9663-1 | ||
Failure | LA9664-9 |
Member of these Panels
LOINC | Long Common Name |
---|---|
55233-1 | Genetic analysis master panel |
51966-0 | Genetic disease DNA analysis panel |
81247-9 | Master HL7 genetic variant reporting panel |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Γενική ερμηνεία ανάλυσης γενετικής νόσου: Synonyms: Imp Γενική ερμηνεία ανάλυσης γενετικής νόσου Γενική ερμηνεία ανάλυσης νόσου Ερμηνεία |
es-ES | Spanish (Spain) | Interpretación general del análisis en la enfermedad genética: |
es-MX | Spanish (Mexico) | Interpretación general del análisis de enfermedades genéticas: |
fr-FR | French (France) | Maladie génétique interprétation globale: |
it-IT | Italian (Italy) | Malattia genetica, interpretazione generale analisi: Synonyms: Genetica molecolare Impressione/interpretazione di studio Interpretazione generale di analisi di malattia ge Punto nel tempo (episodio) Referto clinico di test genetico Sangue Sangue o Tessuto Tessuto & |
pt-BR | Portuguese (Brazil) | Doenças genéticas análise total interpretação: Synonyms: Interp; |
ru-RU | Russian (Russian Federation) | Генетические заболевания анализ общая интерпретация: Synonyms: Впечатление/интерпретация исследования Кровь Кровь или Ткань Номинальный; |
tr-TR | Turkish (Turkey) | Genetik hastalık analizi tüm yorumu: |
zh-CN | Chinese (China) | 遗传性疾病分析总体解释: Synonyms: HL7 遗传学 全血或组织; |
Third Party Copyright
This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.
This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.
Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to http://www.snomed.org/snomed-ct/get-snomed-ct or info@snomed.org<mailto:info@snomed.org>. This may incur a fee in SNOMED International non-Member countries.
83006-7 Deletion-duplication overall interpretation
Observation Required in Panel
Conditional
Fully-Specified Name
- Component
- Deletion-duplication overall interpretation
- Property
- Imp
- Time
- Pt
- System
- ^Patient
- Scale
- Nom
- Method
Basic Attributes
- Class
- MOLPATH.DELDUP
- Type
- Laboratory
- First Released
- Version 2.58
- Last Updated
- Version 2.58 (ADD)
- Order vs. Observation
- Observation
Example Answer List LL4166-6
Answer | Code | Score | Answer ID |
---|---|---|---|
No deletion or duplication detected in studied region | LA26803-9 | ||
Deletion and/or duplication detected in studied regions | LA26804-7 | ||
Inconclusive Copyright http://snomed.info/sct ID:419984006 Inconclusive (qualifier value) | LA9663-1 |
Member of these Panels
LOINC | Long Common Name |
---|---|
81247-9 | Master HL7 genetic variant reporting panel |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Γενική ερμηνεία διαγραφής-διπλασιασμού: Synonyms: Imp Γενική ερμηνεία διαγραφής-διπλασιασμού Ερμηνεία |
es-ES | Spanish (Spain) | Interpretación general de deleción-duplicación: |
es-MX | Spanish (Mexico) | Interpretación general de supresión-duplicación: |
fr-FR | French (France) | Délétion-duplication interprétation globale: |
it-IT | Italian (Italy) | Delezione-duplicazione, interpretazione complessiva: Synonyms: Delezione o duplicazione genica Impressione/interpretazione di studio Interpretazione complessiva di delezione-duplicazi Patologia molecolare paziente Punto nel tempo (episodio) |
zh-CN | Chinese (China) | 缺失-重复总体解释: Synonyms: 全面; |
Third Party Copyright
This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.
This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.
Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to http://www.snomed.org/snomed-ct/get-snomed-ct or info@snomed.org<mailto:info@snomed.org>. This may incur a fee in SNOMED International non-Member countries.
51969-4 Genetic analysis report
Term Description
Narative report in disease diagnostic-based format.
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- Genetic analysis summary report
- Property
- Find
- Time
- Pt
- System
- Bld/Tiss
- Scale
- Doc
- Method
- Molgen
Basic Attributes
- Class
- HL7.GENETICS
- Type
- Laboratory
- First Released
- Version 2.24
- Last Updated
- Version 2.73 (MIN)
- Order vs. Observation
- Observation
- Common Test Rank Get Info
- 3738
Member of these Panels
LOINC | Long Common Name |
---|---|
62389-2 | Chromosome analysis master panel |
55233-1 | Genetic analysis master panel |
51966-0 | Genetic disease DNA analysis panel |
81247-9 | Master HL7 genetic variant reporting panel |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Συνοπτική έκθεση γενετικής ανάλυσης: Synonyms: Αναφορά Εύρεση Συνοπτική έκθεση γενετικής ανάλυσης |
es-ES | Spanish (Spain) | Informe de enfemedades genéticas: |
es-MX | Spanish (Mexico) | Informe resumido del análisis genético: |
fr-FR | French (France) | Compte rendu de génétique: |
it-IT | Italian (Italy) | Analisi genetica, referto generale: Synonyms: Genetica molecolare Osservazione Punto nel tempo (episodio) Referto Referto clinico di test genetico Referto generale di analisi genetica Sangue Sangue o Tessuto Tessuto & |
nl-NL | Dutch (Netherlands) | genetische analyse beknopt report: Synonyms: molgen |
pt-BR | Portuguese (Brazil) | Relatório sumário de análise genética: Synonyms: ; |
ru-RU | Russian (Russian Federation) | Генетический анализ краткие сведения отчёт: Synonyms: Документ Кровь Кровь или Ткань Ткань и мазки Точка во времени; |
tr-TR | Turkish (Turkey) | Genetik analizi summary report: |
zh-CN | Chinese (China) | 遗传分析摘要报告: Synonyms: HL7 遗传学 临床文档型; |
81291-7 Variant ISCN
Term Description
ISCN is a syntax for describing cytogenetic findings, from classical karyotypes to details that can be observed with copy number methodologies. Using ISCN nomenclature is highly recommended for reporting structural variants.
Observation Required in Panel
Conditional
Fully-Specified Name
- Component
- Structural variant ISCN name
- Property
- Find
- Time
- Pt
- System
- ^Patient
- Scale
- Nom
- Method
Basic Attributes
- Class
- MOLPATH
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.58 (MIN)
- Order vs. Observation
- Observation
Member of these Panels
LOINC | Long Common Name |
---|---|
81247-9 | Master HL7 genetic variant reporting panel |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Όνομα ISCN δομικής παραλλαγής: Synonyms: Δομική παραλλαγή Εύρεση Όνομα Όνομα ISCN δομικής παραλλαγής |
es-MX | Spanish (Mexico) | Nombre ISCN de variante estructural: |
es-ES | Spanish (Spain) | Nombre de la variante estructural ISCN: |
fr-FR | French (France) | Variant structurel ISCN nom: |
it-IT | Italian (Italy) | Variante strutturale nome ISCN: Synonyms: Osservazione Patologia molecolare paziente Punto nel tempo (episodio) |
zh-CN | Chinese (China) | 结构变异 ISCN 命名: Synonyms: 分子病理学; |
62374-4 Human reference sequence assembly version
Term Description
The NCBI build id for human genome assemblies.
Observation Required in Panel
Conditional
Fully-Specified Name
- Component
- Human reference sequence assembly release number
- Property
- ID
- Time
- Pt
- System
- Bld/Tiss
- Scale
- Nom
- Method
- Molgen
Basic Attributes
- Class
- HL7.CYTOGEN
- Type
- Laboratory
- First Released
- Version 2.34
- Last Updated
- Version 2.64 (MIN)
- Change Reason
- Updated LCN per CJM for HL7 CG IG; Changed Answer list binding from Normative to Preferred to allow reporting of new versions over time
- Order vs. Observation
- Observation
Preferred Answer List LL1040-6
Answer | Code | Score | Answer ID |
---|---|---|---|
NCBI Build 34 | 34 | LA14032-9 | |
GRCh37 | GRCh37 | LA14029-5 | |
NCBI Build 36.1 | 36.1 | LA14030-3 | |
NCBI Build 35 | 35 | LA14031-1 | |
GRCh38 | GRCh38 | LA26806-2 |
Member of these Panels
LOINC | Long Common Name |
---|---|
62389-2 | Chromosome analysis master panel |
81247-9 | Master HL7 genetic variant reporting panel |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Αριθμός δημοσίευσης ανθρώπινης ακολουθίας αναφοράς: Synonyms: Ακολουθία αναφοράς Αναγνωριστικό Αριθμός Αριθμός δημοσίευσης ανθρώπινης ακολουθίας αναφοράς |
es-ES | Spanish (Spain) | Identificador único de registro de secuencia humana de referencia NCBI: |
es-MX | Spanish (Mexico) | Número de versión del conjunto de secuencia de referencia humana: |
fr-FR | French (France) | Numéro de séquence de référence humaine: |
it-IT | Italian (Italy) | Numero di release assemblea sequenza umana di riferimento: Synonyms: Genetica molecolare Identificatore Punto nel tempo (episodio) Referto clinico di citogenetica Sangue Sangue o Tessuto Tessuto & |
ru-RU | Russian (Russian Federation) | Человека генома справочника сборки релиза номер: Synonyms: Идентификатор Кровь Кровь или Ткань Номинальный; |
tr-TR | Turkish (Turkey) | Human reference sequence assembly release number: |
zh-CN | Chinese (China) | 人类参考基因组序列组装发布版本号: Synonyms: HL7 细胞遗传学 个数; |
81303-0 HGVS version [ID]
Term Description
Report the version of HGVS used for all observations specified using HGVS nomenclature. Any change in the HGVS recommendations will get a new version number based on the date of the change. The format for reporting the HGVS version used is:
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- HGVS version
- Property
- ID
- Time
- Pt
- System
- ^Patient
- Scale
- Nom
- Method
Basic Attributes
- Class
- MOLPATH
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.58 (MIN)
- Order vs. Observation
- Observation
Member of these Panels
LOINC | Long Common Name |
---|---|
81247-9 | Master HL7 genetic variant reporting panel |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Έκδοση HGVS: Synonyms: Αναγνωριστικό Έκδοση Έκδοση HGVS |
es-ES | Spanish (Spain) | Versión HGVS: |
es-MX | Spanish (Mexico) | Versión HGVS: |
fr-FR | French (France) | HGVS version: |
it-IT | Italian (Italy) | HGVS, versione: Synonyms: Identificatore Patologia molecolare paziente Punto nel tempo (episodio) versione HGVS |
zh-CN | Chinese (China) | HGVS 版本: Synonyms: HGVS 命名规则版本; |
82115-7 dbSNP version [ID]
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- dbSNP version
- Property
- ID
- Time
- Pt
- System
- ^Patient
- Scale
- Nom
- Method
Basic Attributes
- Class
- MOLPATH
- Type
- Laboratory
- First Released
- Version 2.56
- Last Updated
- Version 2.58 (MIN)
- Order vs. Observation
- Observation
Member of these Panels
LOINC | Long Common Name |
---|---|
81247-9 | Master HL7 genetic variant reporting panel |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | έκδοση dbSNP: Synonyms: dbSNP Αναγνωριστικό Έκδοση έκδοση dbSNP |
es-ES | Spanish (Spain) | Versión dbSNP (base de datos de polimorfismos de nucleótido simple): |
es-MX | Spanish (Mexico) | versión dbSNP: |
fr-FR | French (France) | dbSNP version: |
it-IT | Italian (Italy) | versione dbSNP: Synonyms: database dei polimorfismi di un signolo nucleotide Identificatore Patologia molecolare paziente Punto nel tempo (episodio) |
zh-CN | Chinese (China) | dbSNP 版本: Synonyms: dbSNP 数据库版本; |
83007-5 COSMIC version [ID]
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- COSMIC version
- Property
- ID
- Time
- Pt
- System
- ^Patient
- Scale
- Nom
- Method
Basic Attributes
- Class
- MOLPATH
- Type
- Laboratory
- First Released
- Version 2.58
- Last Updated
- Version 2.58 (ADD)
- Order vs. Observation
- Observation
Member of these Panels
LOINC | Long Common Name |
---|---|
81247-9 | Master HL7 genetic variant reporting panel |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Έκδοση COSMIC: Synonyms: Αναγνωριστικό Έκδοση Έκδοση COSMIC |
es-ES | Spanish (Spain) | Versión COSMIC: |
es-MX | Spanish (Mexico) | Versión COSMIC: |
fr-FR | French (France) | Version COSMIC: |
it-IT | Italian (Italy) | COSMIC versione: Synonyms: Identificatore Patologia molecolare paziente Punto nel tempo (episodio) |
zh-CN | Chinese (China) | COSMIC 版本: Synonyms: Catalogue Of Somatic Mutations In Cancer; |
83008-3 ClinVar version [ID]
Observation Required in Panel
Optional
Fully-Specified Name
- Component
- ClinVar version
- Property
- ID
- Time
- Pt
- System
- ^Patient
- Scale
- Nom
- Method
Basic Attributes
- Class
- MOLPATH
- Type
- Laboratory
- First Released
- Version 2.58
- Last Updated
- Version 2.58 (ADD)
- Order vs. Observation
- Observation
Member of these Panels
LOINC | Long Common Name |
---|---|
81247-9 | Master HL7 genetic variant reporting panel |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Έκδοση ClinVar: Synonyms: Αναγνωριστικό Έκδοση Έκδοση ClinVar |
es-ES | Spanish (Spain) | Versión ClinVar: |
es-MX | Spanish (Mexico) | Versión ClinVar: |
fr-FR | French (France) | Version ClinVar: |
it-IT | Italian (Italy) | Versione ClinVar: Synonyms: Identificatore Patologia molecolare paziente Punto nel tempo (episodio) |
zh-CN | Chinese (China) | ClinVar 版本: Synonyms: 人类遗传变异与表型关系数据库; |