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82181-9 Cryptococcus gattii+neoformans DNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

Term Description

This assay detects the presence of nucleic acid sequences from the Cryptococcus neoformans+gattii DNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. The assay does not distinguish between the two species. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Descriptions

LP212413-1   Cryptococcus gattii+neoformans
Cryptococcus neoformans and C. gattii are fungi species known to cause pulmonary and systemic cryptococcosis. C. neoformans causes severe meningitis and meningo-encephalitis in patients with advanced HIV/AIDS. C. gattii is found primarily in tropical and subtropical climates and is capable of causing cryptococcosis in non-immunocompromised patients. More recently, an outbreak of C. gattii occurred in British Columbia, possibly due to global warming. PMCID: PMC535360 Source: Regenstrief LOINC

Fully-Specified Name

Component
Cryptococcus gattii+neoformans DNA
Property
PrThr
Time
Pt
System
CSF
Scale
Ord
Method
Non-probe.amp.tar

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.83 (MIN)
Change Reason
Updated Shortname override.
Order vs. Observation
Both
Common Test Rank Get Info
2612

Example Answer List LL744-4

AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Member of these Panels

LOINCLong Common Name
82180-1Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Cryptococcus gattii+neoformans DNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
de-ATGerman (Austria)Synonyms: Cryptococcus gattii+neoformans DNA ql. /L PCR
el-GRGreek (Greece)Μύκητες Cryptococcus gattii+neoformans DNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου
Synonyms: DNA MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου ΕΝΥ Μύκητας Cryptococcus gattii Μύκητες Cryptococcus gattii+neoformans Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ESSpanish (Spain)Cryptococcus gattii+neoformans ADN:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MXSpanish (Mexico)ADN de Cryptococo gattii + neoformans:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-FRFrench (France)Cryptococcus gattii+Cryptococcus neoformans ADN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)Cryptococcus gattii+neoformans DNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PLPolish (Poland)Cryptococcus gattii+neoformans DNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Cryptococcus gattii i Cryptococcus neoformans Kwas deoksyrybonukleinowy
zh-CNChinese (China)格特隐球菌+新型隐球菌 DNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向
Synonyms: CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向 克里氏综合症 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 布-布二氏病 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 新型隐球菌病 时刻;随机;随意;瞬间 格特隐球菌（加特隐球菌）+新型隐球菌（新生隐球菌、新生隐球酵母） 经过扩增的 脊液 脊髓液 脑脊液（Cerebral spinal fluid，CSF） 脑脊髓液 脱氧核糖核酸探针 隐球菌病 隐球酵母

82182-7 Escherichia coli K1 DNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

Term Description

This assay detects the presence of nucleic acid sequences from the Escherichia coli K1 DNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Descriptions

LP18624-4   Escherichia coli K1
Escherichia coli strains with the K1 capsule antigen account for the majority (∼80%) of isolates from patients with neonatal E. coli meningitis (NMEC). PMID: 16552050 Bacterial meningitis in neonates is a severe infectious disease with mortality rates varying between 10% and 15%. PMID: 21416693 Infections in adults are less common and usually occur following trauma or surgical procedures. Source: Regenstrief LOINC

Fully-Specified Name

Component
Escherichia coli K1 DNA
Property
PrThr
Time
Pt
System
CSF
Scale
Ord
Method
Non-probe.amp.tar

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.83 (MIN)
Order vs. Observation
Both
Common Test Rank Get Info
2710

Example Answer List LL744-4

AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Member of these Panels

LOINCLong Common Name
82180-1Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Escherichia coli K1 DNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
de-ATGerman (Austria)Synonyms: E. coli K1 /Liquor PCR
el-GRGreek (Greece)Escherichia coli K1 (Κολοβακτηρίδιο) DNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου
Synonyms: DNA Escherichia coli (Κολοβακτηρίδιο) Escherichia coli K1 (Κολοβακτηρίδιο) MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου ΕΝΥ Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ESSpanish (Spain)Escherichia coli K1 ADN:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MXSpanish (Mexico)ADN de Escherichia coli K1:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CAFrench (Canada)Escherichia coli K1, ADN:Présence-Seuil:Temps ponctuel:LCR:Ordinal:Non-sonde.amplification de cible
fr-FRFrench (France)Escherichia coli K1 ADN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)Escherichia coli K1 DNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PLPolish (Poland)Escherichia coli K1 DNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Kwas deoksyrybonukleinowy
zh-CNChinese (China)大肠埃希菌 K1 DNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向
Synonyms: CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 E coli;大肠埃希氏杆菌;大肠埃希氏菌;大肠杆菌 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 大肠埃希菌（E coli、大肠埃希氏杆菌、大肠埃希氏菌、大肠杆菌） K1 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 经过扩增的 脊液 脊髓液 脑脊液（Cerebral spinal fluid，CSF） 脑脊髓液 脱氧核糖核酸探针

82183-5 Haemophilus influenzae DNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

Term Description

This assay detects the presence of nucleic acid sequences from the Haemophilus influenzae DNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Descriptions

LP16649-3   Haemophilus influenzae
Haemophilus influenza is a pleomorphic gram-negative coccobacillus. H influenzae is divided into six serotype (A-F) based on their capsular polysaccharides. The majority of haemophilus infections are caused by H influenza serotype B (HIB) which causes pneumonia, bacteremia, meningitis, epiglottitis, septic arthritis, cellulitis, otitis media, purulent pericarditis, endocarditis and osteomyelitis. Infections with the remaining serotypes lead to similar disease processes as HIB. Unencapsulated H influenzae that is not able to be typed (nontypable H influenzae) can cause ear infections in children and bronchitis in adults but also bacteremia and bacteremic pneumonia. Nontypable H influenza is the main cause of invasive H influenzae infections in all age groups. Transmission of H influenzae is by direct contact with respiratory aerosols. Neonates can become infected with H influenza by aspirating amniotic fluid or through contact with genital tract secretions.https://www.cdc.gov/hi-disease/clinicians.html Source: Regenstrief LOINC

Fully-Specified Name

Component
Haemophilus influenzae DNA
Property
PrThr
Time
Pt
System
CSF
Scale
Ord
Method
Non-probe.amp.tar

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.83 (MIN)
Order vs. Observation
Both
Common Test Rank Get Info
2526

Example Answer List LL744-4

AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Member of these Panels

LOINCLong Common Name
82180-1Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Member of these Groups Get Info

LOINC GroupGroup Name
LG41617-8Haemophilus influenzae

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Haemophilus influenzae DNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
de-ATGerman (Austria)Synonyms: Haemophilus influenzae /Liquor PCR
de-DEGerman (Germany)Haemophilus influenzae DNA:Nachweis oder Schwellenwert:Zeitpunkt:Liquor:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
Synonyms: Zerebrospinalflüssigkeit
el-GRGreek (Greece)Βακτήριο Haemophilus influenzae DNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου
Synonyms: DNA MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Βακτήριο Haemophilus influenzae ΕΝΥ Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ESSpanish (Spain)Haemophilus influenzae ADN:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MXSpanish (Mexico)ADN de Haemophilus influenzae:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CAFrench (Canada)Haemophilus influenzae, ADN:Présence-Seuil:Temps ponctuel:LCR:Ordinal:Non-sonde.amplification de cible
fr-FRFrench (France)Haemophilus influenzae ADN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)Haemophilus influenzae DNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PLPolish (Poland)Haemophilus influenzae DNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Kwas deoksyrybonukleinowy Pałeczka grypy
zh-CNChinese (China)流感嗜血杆菌 DNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向
Synonyms: CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 嗜血杆菌属 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 经过扩增的 脊液 脊髓液 脑脊液（Cerebral spinal fluid，CSF） 脑脊髓液 脱氧核糖核酸探针

82184-3 Listeria monocytogenes DNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

Term Description

This assay detects the presence of nucleic acid sequences from the Listeria monocytogenes DNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Descriptions

LP16653-5   Listeria monocytogenes
Listeria monocytogenes is a facultative anaerobic bacterium that has the ability to live intracellularly. It is ubiquitous in the environment, an important foodborne pathogen, and of concern to the food industry especially unpasteurized dairy. L. monocytogenes most commonly infects immunocompromised persons, the elderly and pregnant women. In the case of pregnant women, the fetal mortality rate has been reported as high as 45%, and in immunocompromised patients, can lead to meningitis, CNS infection or severe bacteremia. PMID: 28781746 Source: Regenstrief LOINC

Fully-Specified Name

Component
Listeria monocytogenes DNA
Property
PrThr
Time
Pt
System
CSF
Scale
Ord
Method
Non-probe.amp.tar

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.83 (MIN)
Order vs. Observation
Both
Common Test Rank Get Info
2644

Example Answer List LL744-4

AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Member of these Panels

LOINCLong Common Name
82180-1Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Member of these Groups Get Info

LOINC GroupGroup Name
LG41641-8Listeria

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Listeria monocytogenes DNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
de-ATGerman (Austria)Synonyms: Listeria monocytogenes DNA /Liquor PCR
de-DEGerman (Germany)Listeria monocytogenes DNA:Nachweis oder Schwellenwert:Zeitpunkt:Liquor:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
Synonyms: Zerebrospinalflüssigkeit
el-GRGreek (Greece)Βακτήριο Listeria monocytogenes DNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου
Synonyms: DNA MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Βακτήριο Listeria monocytogenes ΕΝΥ Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ESSpanish (Spain)Listeria monocytogenes ADN:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MXSpanish (Mexico)ADN de Listeria monocytogenes:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CAFrench (Canada)Listeria monocytogenes, ADN:Présence-Seuil:Temps ponctuel:LCR:Ordinal:Non-sonde.amplification de cible
fr-FRFrench (France)Listeria monocytogenes ADN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)Listeria monocytogenes DNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PLPolish (Poland)Listeria monocytogenes DNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Kwas deoksyrybonukleinowy
zh-CNChinese (China)单核细胞增生李斯特菌 DNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向
Synonyms: CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向 单核细胞增多性李斯特菌;单核细胞增生症李斯特菌 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 回旋病 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 李司忒氏菌 李司忒氏菌属 李司忒氏菌病 李司忒菌 李司忒菌属 李斯特杆菌 李斯特氏杆菌 李斯特氏菌 李斯特氏菌属 李斯特氏菌病 李斯特菌属 李斯特菌病 李氏杆菌病 经过扩增的 脊液 脊髓液 脑脊液（Cerebral spinal fluid，CSF） 脑脊髓液 脱氧核糖核酸探针

82185-0 Neisseria meningitidis DNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

Term Description

This assay detects the presence of nucleic acid sequences from the Neisseria meningitidis DNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Descriptions

LP16660-0   Neisseria meningitidis
Neisseria meningitidis is a species of gram-negative, aerobic bacteria. It is a commensal and pathogen only of humans, and can be carried asymptomatically in the nasopharynx. When found in cerebrospinal fluid it is the causative agent of cerebrospinal meningitis (meningitis, meningococcal). It can also be found in venereal discharges and blood. At least 13 serogroups have been described based on antigenic differences in the capsular polysaccharides; the ones causing most meningitis infections being A, B, C, Y, and W-135. Outbreaks caused by serogroup X meningococci have also been reported. Each serogroup can be further classified by serotype, serosubtype, and immunotype. Source: National Library of Medicine, MeSH 2006

Fully-Specified Name

Component
Neisseria meningitidis DNA
Property
PrThr
Time
Pt
System
CSF
Scale
Ord
Method
Non-probe.amp.tar

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.83 (MIN)
Order vs. Observation
Both
Common Test Rank Get Info
2527

Example Answer List LL744-4

AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Member of these Panels

LOINCLong Common Name
82180-1Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Member of these Groups Get Info

LOINC GroupGroup Name
LG41618-6Neisseria meningitidis

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Neisseria meningitidis DNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
de-ATGerman (Austria)Synonyms: Neisseria meningitidis DNA ql. /L PCR
de-DEGerman (Germany)Neisseria meningitidis DNA:Nachweis oder Schwellenwert:Zeitpunkt:Liquor:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
Synonyms: Zerebrospinalflüssigkeit
el-GRGreek (Greece)Βακτήριο Neisseria meningitidis (Ναϊσσέρια μηνιγγίτιδας) DNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου
Synonyms: DNA MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Βακτήριο Neisseria meningitidis (Ναϊσσέρια μηνιγγίτιδας) ΕΝΥ Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ESSpanish (Spain)Neisseria meningitidis ADN:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MXSpanish (Mexico)ADN de Neisseria meningitidis:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CAFrench (Canada)Neisseria meningitidis, ADN:Présence-Seuil:Temps ponctuel:LCR:Ordinal:Non-sonde.amplification de cible
fr-FRFrench (France)Neisseria meningitidis ADN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)Neisseria meningitidis DNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PLPolish (Poland)Neisseria meningitidis DNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Dwoinka nagminnego zapalenia opon mózgowo-rdzeniowych;meningokok Kwas deoksyrybonukleinowy
zh-CNChinese (China)脑膜炎奈瑟菌 DNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向
Synonyms: CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 流脑;流行性脑脊髓膜炎;脑膜炎双球菌;脑膜炎双球菌性脑膜炎;脑膜炎奈瑟氏双球菌;脑膜炎奈瑟氏球菌;脑膜炎奈瑟氏菌;脑膜炎球菌;脑膜炎球菌性脑膜炎 经过扩增的 脊液 脊髓液 脑脊液（Cerebral spinal fluid，CSF） 脑脊髓液 脑膜炎双球菌 DNA 脑膜炎奈瑟氏菌 DNA 脱氧核糖核酸探针

82186-8 Streptococcus agalactiae DNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

Term Description

This assay detects the presence of nucleic acid sequences from the Streptococcus agalactiae DNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Descriptions

LP14405-2   Streptococcus agalactiae
Streptococcus agalactiae (S. agalactiae) or Group B Streptococcus (GBS) is a gram-positive coccus that causes serious diseases, primarily in neonates, pregnant patients, elderly patients and those with significant underlying diseases. S. agalactiae typically presents as skin and soft tissue infections; while meningitis and endocarditis are rare presentations, they are marked with serious morbidity and mortality. Blood cultures confirm S. agalactiae presence. Chronic kidney disease, cardiac failure, history of neoplasia, history of ischemic heart disease, and diabetes mellitus are risks for acquiring agressive S. agalactiae infection. Source: Regenstrief LOINC, [PMID: 30034954]

Fully-Specified Name

Component
Streptococcus agalactiae DNA
Property
PrThr
Time
Pt
System
CSF
Scale
Ord
Method
Non-probe.amp.tar

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.83 (MIN)
Order vs. Observation
Both
Common Test Rank Get Info
1826

Example Answer List LL744-4

AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Member of these Panels

LOINCLong Common Name
82180-1Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Streptococcus agalactiae DNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
de-ATGerman (Austria)Synonyms: Streptococcus agalactiae DNA /L PCR
de-DEGerman (Germany)Streptococcus agalactiae DNA:Nachweis oder Schwellenwert:Zeitpunkt:Liquor:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
Synonyms: Zerebrospinalflüssigkeit
el-GRGreek (Greece)Στρεπτόκοκκος agalactiae (β-αιμολυτικός στρεπτόκοκκος ομάδας Β) DNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου
Synonyms: DNA MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου ΕΝΥ Στρεπτόκοκκος agalactiae (β-αιμολυτικός στρεπτόκοκκος ομάδας Β) Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ESSpanish (Spain)Streptococcus agalactiae ADN:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MXSpanish (Mexico)ADN de Streptococo agalactiae:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CAFrench (Canada)Streptococcus agalactiae, ADN:Présence-Seuil:Temps ponctuel:LCR:Ordinal:Non-sonde.amplification de cible
fr-FRFrench (France)Streptococcus agalactiae ADN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)Streptococcus agalactiae DNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PLPolish (Poland)Streptococcus agalactiae DNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Kwas deoksyrybonukleinowy Paciorkowiec bezmleczności;GBS
zh-CNChinese (China)无乳链球菌 DNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向
Synonyms: B 族链球菌 DNA B 族链球菌;B 组链球菌;B 群链球菌;GBS B 组链球菌 DNA B 群链球菌 DNA CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 经过扩增的 脊液 脊髓液 脑脊液（Cerebral spinal fluid，CSF） 脑脊髓液 脱氧核糖核酸探针

82187-6 Streptococcus pneumoniae DNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

Term Description

This assay detects the presence of nucleic acid sequences from the Streptococcus pneumoniae DNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Descriptions

LP14410-2   Streptococcus pneumoniae
Streptococcus pneumoniae are gram-positive cocci that are nonmotile and nonsporulating and usually require complex culture media. Older streptococcal cultures, beyond the most active growth period (the logarithmic phase), sometimes lose their gram-positive staining characteristics. S. pneumoniae are part of the normal respiratory tract flora. Disease usually results due to the acquisition of a new strain following a change in the normal flora, often due to a preceding virus. S. pneumonaie causes otitis media, sinusitis and pneumonia in the middle ear, sinuses or lungs, respectively. Meningitis can occur by bloodstream invasion from the lungs or by extension of otitis media or sinusitis to the meninges. Bacteremia can result in osteomyelitis (infection of bones) or arthritis (of joints). Most bacterial pneumonia occurring after the neonatal period is caused by S. pneumoniae. Pneumococcal pneumonia is seen most commonly in elderly or immunosuppressed individuals. In the United States, it is most prevalent in winter. Diagnosis is usually based on a sputum Gram stain and culture although blood or cerebrospinal fluid may be cultured. While penicillin has been the standard treatment, some strains have proven resistant to penicillin and multiple antibiotics. A vaccine exists. [NCBI Books:NBK7611] Source: Regenstrief LOINC

Fully-Specified Name

Component
Streptococcus pneumoniae DNA
Property
PrThr
Time
Pt
System
CSF
Scale
Ord
Method
Non-probe.amp.tar

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.83 (MIN)
Order vs. Observation
Both
Common Test Rank Get Info
2525

Example Answer List LL744-4

AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Member of these Panels

LOINCLong Common Name
82180-1Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Streptococcus pneumoniae DNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
de-ATGerman (Austria)Synonyms: Streptococcus pneumoniae DNA /Liquor PCR
de-DEGerman (Germany)Streptococcus pneumoniae DNA:Nachweis oder Schwellenwert:Zeitpunkt:Liquor:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
Synonyms: Zerebrospinalflüssigkeit
el-GRGreek (Greece)Streptococcus pneumoniae (Στρεπτόκοκκος πνευμονίας) DNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου
Synonyms: DNA MICRO Ord PrThr Pt Streptococcus pneumoniae (Στρεπτόκοκκος πνευμονίας) Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου ΕΝΥ Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ESSpanish (Spain)Streptococcus pneumoniae ADN:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MXSpanish (Mexico)ADN de Streptococo pneumoniae:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CAFrench (Canada)Streptococcus pneumoniae, ADN:Présence-Seuil:Temps ponctuel:LCR:Ordinal:Non-sonde.amplification de cible
fr-FRFrench (France)Streptococcus pneumoniae ADN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)Streptococcus pneumoniae DNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PLPolish (Poland)Streptococcus pneumoniae DNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Dwoinka zapalenia płuc;pneumokok Kwas deoksyrybonukleinowy
zh-CNChinese (China)肺炎链球菌 DNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向
Synonyms: CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 球菌肺炎;肺双;肺炎双球菌;肺炎球菌;肺链;链球菌肺炎 经过扩增的 脊液 脊髓液 脑脊液（Cerebral spinal fluid，CSF） 脑脊髓液 脱氧核糖核酸探针

82188-4 Varicella zoster virus DNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

Term Description

This assay detects the presence of nucleic acid sequences from the Varicella zoster virus DNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Descriptions

LP14853-3   Varicella zoster virus
Varicella zoster virus (VZV) is a double-stranded alphaherpesvirus that causes seasonal outbreaks of chickenpox and shingles in non-immunized populations. VZV is highly infectious and is transmitted by contact with the ruptured fluid filled blisters and respiratory secretions of infected individuals. Immunity post infection is usually lifelong though the latent virus inhabits the sensory nerve ganglia where it can reactivate causing shingles when immunity declines with aging.http://jvi.asm.org/content/88/24/13936.full In the over fifty strains of VZV that have been sequenced it has been found that a single nucleotide polymorphism occurs about every 100 bases. The patterns of polymorphisms in VZV correlate with different geographical regions of infection and is the basis for the classification of viral clades.https://grose.lab.uiowa.edu/vzv-genomes-and-evolution Breuer proposed the nomenclature for the VZV clades as 1-5 with the suspected clades VI and VII to be confirmed later. The geographical regions associated with the seven clades are as follows:
Clades 1 and 3-represent the dominant clades of the circulating VZV in Europe and the Americas
Clades 4 and 5-found in Africa
Clade VI found in France, Italy
Clade VII exclusively isolated in the US
Clade 2-Asia from Korea, Japan, China not found in India, Nepal and Bangladesh where clades 4 and 5 were dominant
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5054591/ Source: Regenstrief LOINC

Fully-Specified Name

Component
Varicella zoster virus DNA
Property
PrThr
Time
Pt
System
CSF
Scale
Ord
Method
Non-probe.amp.tar

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.83 (MIN)
Order vs. Observation
Both
Common Test Rank Get Info
4250

Example Answer List LL744-4

AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Member of these Panels

LOINCLong Common Name
82180-1Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Member of these Groups Get Info

LOINC GroupGroup Name
LG32750-8Varicella zoster virus

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Virus Varicella zoster DNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
de-DEGerman (Germany)Varicella-Zoster-Virus DNA:Nachweis oder Schwellenwert:Zeitpunkt:Liquor:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
Synonyms: Human alphaherpesvirus 3; VZV; Zerebrospinalflüssigkeit
el-GRGreek (Greece)Ιός της ανεμοβλογιάς-έρπητα ζωστήρα DNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου
Synonyms: DNA MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου ΕΝΥ Ιός Ιός της ανεμοβλογιάς-έρπητα ζωστήρα Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ESSpanish (Spain)Virus Varicella zoster ADN:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MXSpanish (Mexico)ADN del virus de la varicela zóster:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CAFrench (Canada)Virus varicelle-zona, ADN:Présence-Seuil:Temps ponctuel:LCR:Ordinal:Non-sonde.amplification de cible
fr-FRFrench (France)Varicelle zona virus ADN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)Varicella zoster, virus DNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus della varicella zoster
pl-PLPolish (Poland)Wirus ospy wietrznej i półpaśca DNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Kwas deoksyrybonukleinowy VZV
uk-UAUkrainian (Ukraine)ДНК вірусу Varicella Zoster:Наявність або Поріг:МоментЧасу:Спинномозкова рідина:Порядково:Детекція без зонда.цільова аміпліфікація НК
Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; Cerebral spinal fluid; Cerebrospinal Fl; Chicken pox; Chicken pox virus; Chickenpox; Deoxyribonucleic acid; DNA NUCLEIC ACID PROBE; DNA probe; Herpes zoster; HHV-3; Human herpesvirus 3; ID; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Neuro; Neurology; Nucleic acid sequence based analysis; Ordinal; PCR; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Screen; SDA; Shingles; Spinal Fl; Spinal Fld; Spinal Flu; Spinal Fluid; Strand Displacement Amplification; TMA; Transcription mediated amplification; VZ; VZV; Zoster
zh-CNChinese (China)水痘带状疱疹病毒 DNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向
Synonyms: CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 HHV-3 DNA HHV-3;VZ;VZV;人类疱疹病毒 3 型;人类疱疹病毒 III 型;带状疱疹;水痘;水痘带状疱疹;水痘病毒;Varicella zoster virus;水痘-带状疱疹病毒 VZV DNA 人类疱疹病毒 3 型 DNA 人类疱疹病毒 III 型 DNA 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 水痘病毒 DNA 经过扩增的 脊液 脊髓液 脑脊液（Cerebral spinal fluid，CSF） 脑脊髓液 脱氧核糖核酸探针

82189-2 Cytomegalovirus DNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

Term Description

This assay detects the presence of nucleic acid sequences from the Cytomegalovirus DNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Descriptions

LP14255-1   Cytomegalovirus
Cytomegalovirus is a member of the family Herpesviridae and also known as Human Herpesvirus-5 (HHV-5). It contains a linear double-stranded DNA encased in an icosahedral capsid that is surrounded by a viral envelope. It replicates slowly and may take weeks for the infection to become visible microscopically. Its life cycle includes a lytic and a latent phase. During the lytic phase the cytoskeleton of the infected cell is disrupted and becomes very large. The enlarged cell eludes detection by natural killer (NK) cells by encoding UL16. UL16 is a protein that binds to the ligand NDG2D which is a surface receptor on NK cells and, when blocked, prevents the CMV infected cell from apoptotic signaling to NK cells to destroy it.https://pedclerk.bsd.uchicago.edu/page/cytomegalovirus-cmv In the US one in three children are infected by CMV by the age of five and over half of adults are infected by age 40. Infection with CMV is mostly asymptomatic. Symptoms when present include fever, sore throat, fatigue, swollen glands. CMV can occasionally lead to mononucleosis or hepatitis. Immunocompromised patients experience much more acute symptoms that can affect the eyes, lungs, liver, esophagus, stomach, and intestines. For babies born with CMV, involvement with the brain, spleen, lung, liver can occur. In addition, there may be growth problems and hearing loss which is the most common symptom in congenital CMV infection. CMV is transmitted in urine, saliva, blood, tears, semen and breast milk by direct contact. Normally no treatment is necessary, but for severe cases medication is available.https://www.cdc.gov/cmv/overview.html Source: Regenstrief LOINC

Fully-Specified Name

Component
Cytomegalovirus DNA
Property
PrThr
Time
Pt
System
CSF
Scale
Ord
Method
Non-probe.amp.tar

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.83 (MIN)
Order vs. Observation
Both
Common Test Rank Get Info
4251

Example Answer List LL744-4

AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Member of these Panels

LOINCLong Common Name
82180-1Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Cytomegalovirus DNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
de-DEGerman (Germany)Cytomegalie-Virus DNA:Nachweis oder Schwellenwert:Zeitpunkt:Liquor:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
Synonyms: CMV; Zerebrospinalflüssigkeit
el-GRGreek (Greece)Κυτταρομεγαλοϊός DNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου
Synonyms: DNA MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου ΕΝΥ Κυτταρομεγαλοϊός Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ESSpanish (Spain)Citomegalovirus ADN:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MXSpanish (Mexico)ADN de citomegalovirus:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CAFrench (Canada)Cytomégalovirus, ADN:Présence-Seuil:Temps ponctuel:LCR:Ordinal:Non-sonde.amplification de cible
fr-FRFrench (France)Cytomégalovirus ADN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)Citomegalovirus DNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PLPolish (Poland)Wirus cytomegalii DNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Cytomegalowirus DNA Cytomeglaowirusa Kwas deoksyrybonukleinowy
uk-UAUkrainian (Ukraine)Цитомегаловірус ДНК:Наявність або Поріг:МоментЧасу:Спинномозкова рідина:Порядково:Детекція без зонда.цільова аміпліфікація НК
Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; Cerebral spinal fluid; Cerebrospinal Fl; CMV; Cytomegalo virus; Cytomgal; Deoxyribonucleic acid; DNA NUCLEIC ACID PROBE; DNA probe; HHV-5; Human Herpesvirus-5; ID; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Neuro; Neurology; Nucleic acid sequence based analysis; Ordinal; PCR; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Screen; SDA; Spinal Fl; Spinal Fld; Spinal Flu; Spinal Fluid; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CNChinese (China)巨细胞病毒 DNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向
Synonyms: CMV DNA CMV;涎腺病毒;细胞巨化病毒;细胞肥大病毒 CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 经过扩增的 脊液 脊髓液 脑脊液（Cerebral spinal fluid，CSF） 脑脊髓液 脱氧核糖核酸探针

82190-0 Herpes simplex virus 1 DNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

Term Description

This assay detects the presence of nucleic acid sequences from the Herpes simplex virus 1 DNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Descriptions

LP14821-0   Herpes simplex virus 1
Herpes simplex virus 1 and 2 (HSV-1 and HSV-2) are two species of the herpes virus family, Herpesviridae, which cause infections in humans. Eight members of herpes virus family infect humans and cause a variety of illnesses including cold sores, chickenpox or varicella, shingles or herpes zoster (VZV), cytomegalovirus (CMV). Some herpes viruses have been implicated in certain cancers and in the inflammation of the brain (encephalitis). All viruses in the herpes family produce life-long infections.
They are also called Human Herpes Virus 1 and 2 (HHV-1 and HHV-2) and are neurotropic and neuroinvasive viruses; they enter and hide in the human nervous system, accounting for their durability in the human body. HSV-1 is commonly associated with herpes outbreaks of the face known as cold sores or fever blisters, whereas HSV-2 is more often associated with genital herpes. Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details. Source: Wikipedia, Herpes simplex virus 1

Fully-Specified Name

Component
Herpes simplex virus 1 DNA
Property
PrThr
Time
Pt
System
CSF
Scale
Ord
Method
Non-probe.amp.tar

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.83 (MIN)
Order vs. Observation
Both
Common Test Rank Get Info
2613

Example Answer List LL744-4

AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Member of these Panels

LOINCLong Common Name
94583-2Herpes simplex virus 1 and 2 DNA panel - Cerebrospinal Fluid by NAA with non-probe detection
82180-1Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Virus Herpes simplex 1 DNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
el-GRGreek (Greece)Ιός απλού έρπητα 1 DNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου
Synonyms: DNA MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου ΕΝΥ Ιός Ιός απλού έρπητα Ιός απλού έρπητα 1 Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ESSpanish (Spain)Virus Herpes simplex 1 ADN:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MXSpanish (Mexico)ADN del virus del herpes simplex 1:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CAFrench (Canada)Virus de l'herpès simplex 1, ADN:Présence-Seuil:Temps ponctuel:LCR:Ordinal:Non-sonde.amplification de cible
fr-FRFrench (France)Herpes simplex virus 1 ADN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)Herpes simplex, virus 1 DNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda HSV HSV-1 Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PLPolish (Poland)Wirus opryszczki pospolitej 1 DNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy DNA wirusa opryszczki pospolitej typu 1 Kwas deoksyrybonukleinowy Wirus opryszczki pospolitej Wirus opryszczki pospolitej typu 1
uk-UAUkrainian (Ukraine)Вірус простого герпесу 1 ДНК:Наявність або Поріг:МоментЧасу:Спинномозкова рідина:Порядково:Детекція без зонда.цільова аміпліфікація НК
Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; Cerebral spinal fluid; Cerebrospinal Fl; Deoxyribonucleic acid; DNA NUCLEIC ACID PROBE; DNA probe; Herp splx; Herpes simplex virus type 1; HSV; HSV1; i; ID; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Neuro; Neurology; Nucleic acid sequence based analysis; Ordinal; PCR; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Screen; SDA; Spinal Fl; Spinal Fld; Spinal Flu; Spinal Fluid; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CNChinese (China)单纯疱疹病毒 1 型 DNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向
Synonyms: Ⅰ CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 HSV;Herpes simplex virus;单疱病毒;单疱 HSV1 DNA HSV1;单纯疱疹病毒 I 型 I 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向 单纯疱疹病毒 I 型 DNA 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 经过扩增的 脊液 脊髓液 脑脊液（Cerebral spinal fluid，CSF） 脑脊髓液 脱氧核糖核酸探针

82191-8 Herpes simplex virus 2 DNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

Term Description

This assay detects the presence of nucleic acid sequences from the Herpes simplex virus 2 DNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Descriptions

LP14401-1   Herpes simplex virus 2
Herpes simplex virus 1 and 2 (HSV-1 and HSV-2) are two species of the herpes virus family, Herpesviridae, which cause infections in humans. Eight members of herpes virus family infect humans and cause a variety of illnesses including cold sores, chickenpox or varicella, shingles or herpes zoster (VZV), cytomegalovirus (CMV). Some herpes viruses have been implicated in certain cancers and in the inflammation of the brain (encephalitis). All viruses in the herpes family produce life-long infections.
They are also called Human Herpes Virus 1 and 2 (HHV-1 and HHV-2) and are neurotropic and neuroinvasive viruses; they enter and hide in the human nervous system, accounting for their durability in the human body. HSV-1 is commonly associated with herpes outbreaks of the face known as cold sores or fever blisters, whereas HSV-2 is more often associated with genital herpes. Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details. Source: Wikipedia, Herpes simplex virus 1

Fully-Specified Name

Component
Herpes simplex virus 2 DNA
Property
PrThr
Time
Pt
System
CSF
Scale
Ord
Method
Non-probe.amp.tar

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.83 (MIN)
Order vs. Observation
Both
Common Test Rank Get Info
2604

Example Answer List LL744-4

AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Member of these Panels

LOINCLong Common Name
94583-2Herpes simplex virus 1 and 2 DNA panel - Cerebrospinal Fluid by NAA with non-probe detection
82180-1Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Virus Herpes simplex 2 DNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
el-GRGreek (Greece)Ιός απλού έρπητα 2 DNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου
Synonyms: DNA MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου ΕΝΥ Ιός Ιός απλού έρπητα Ιός απλού έρπητα 2 Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ESSpanish (Spain)Virus Herpes simplex 2 ADN:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MXSpanish (Mexico)ADN del virus del herpes simplex 2:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CAFrench (Canada)Virus de l'herpès simplex 2, ADN:Présence-Seuil:Temps ponctuel:LCR:Ordinal:Non-sonde.amplification de cible
fr-FRFrench (France)Herpes simplex virus 2 ADN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)Herpes simplex virus 2 DNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda HSV HSV-2 Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PLPolish (Poland)Wirus opryszczki pospolitej 2 DNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy DNA wirusa opryszczki pospolitej typu 2 Kwas deoksyrybonukleinowy Wirus opryszczki pospolitej Wirus opryszczki pospolitej typu 2
uk-UAUkrainian (Ukraine)Вірус простого герпесу 2 ДНК:Наявність або Поріг:МоментЧасу:Спинномозкова рідина:Порядково:Детекція без зонда.цільова аміпліфікація НК
Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; Cerebral spinal fluid; Cerebrospinal Fl; Deoxyribonucleic acid; DNA NUCLEIC ACID PROBE; DNA probe; Herp splx; Herpes simplex virus type 2; Herpes simplex virus type II; HSV; HSV2; ID; II; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Neuro; Neurology; Nucleic acid sequence based analysis; Ordinal; PCR; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Screen; SDA; Spinal Fl; Spinal Fld; Spinal Flu; Spinal Fluid; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CNChinese (China)单纯疱疹病毒 2 型 DNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向
Synonyms: Ⅱ CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 HSV;Herpes simplex virus;单疱病毒;单疱 HSV2 DNA HSV2;单纯疱疹病毒 II 型 II 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向 单纯疱疹病毒 II 型 DNA 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 经过扩增的 脊液 脊髓液 脑脊液（Cerebral spinal fluid，CSF） 脑脊髓液 脱氧核糖核酸探针

82192-6 Herpes virus 6 DNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

Term Description

This assay detects the presence of nucleic acid sequences from the Herpes virus 6 DNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Descriptions

LP16712-9   Herpes virus 6
Human Herpes Virus 6 (HHV6) is a member of the Beta-herpesvirus subfamily. HHV6 infection is extremely common, with seroprevalence almost 100%. Primary infection results in a fever that may exceed 40 degrees Celsius and last for 3-5 days. Primary infection in children often results in fever followed by development of roseola or sixth disease. The virus exists as latent infection in lymphocytes and monocytes following the primary infection and may be reactivated in immunocompromised patients. Information from ARUP Laboratories 2007 01 08. Source: Regenstrief Institute

Fully-Specified Name

Component
Herpes virus 6 DNA
Property
PrThr
Time
Pt
System
CSF
Scale
Ord
Method
Non-probe.amp.tar

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.83 (MIN)
Order vs. Observation
Both
Common Test Rank Get Info
2614

Example Answer List LL744-4

AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Member of these Panels

LOINCLong Common Name
82180-1Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Herpesvirus 6 DNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
el-GRGreek (Greece)Ιός έρπητα τύπου 6 DNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου
Synonyms: DNA MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου ΕΝΥ Ιός Ιός έρπητα Ιός έρπητα τύπου 6 Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ESSpanish (Spain)Herpes virus 6 ADN:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MXSpanish (Mexico)ADN del virus del herpes 6:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CAFrench (Canada)Virus de l'herpès 6, ADN:Présence-Seuil:Temps ponctuel:LCR:Ordinal:Non-sonde.amplification de cible
fr-FRFrench (France)Herpes virus 6 ADN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)Herpes virus 6 DNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda HHV-6 Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PLPolish (Poland)Herpeswirus 6 DNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy DNA Herpeswirusa typu 6 Herpeswirus Herpeswirus typu 6 Kwas deoksyrybonukleinowy
uk-UAUkrainian (Ukraine)Вірус герпесу 6 ДНК:Наявність або Поріг:МоментЧасу:Спинномозкова рідина:Порядково:Детекція без зонда.цільова аміпліфікація НК
Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; Cerebral spinal fluid; Cerebrospinal Fl; Deoxyribonucleic acid; DNA NUCLEIC ACID PROBE; DNA probe; Herpesvirus; HHV; HHV6; HHV-6; Human herpes virus; Human herpes virus type 6; ID; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Neuro; Neurology; Nucleic acid sequence based analysis; Ordinal; PCR; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Screen; SDA; Spinal Fl; Spinal Fld; Spinal Flu; Spinal Fluid; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CNChinese (China)疱疹病毒 6 型 DNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向
Synonyms: CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 HHV;人疱疹病毒;人类疱疹病毒 HHV6 DNA HHV-6 DNA HHV6;HHV-6 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 经过扩增的 脊液 脊髓液 脑脊液（Cerebral spinal fluid，CSF） 脑脊髓液 脱氧核糖核酸探针

82193-4 Parechovirus A RNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

Term Description

This assay detects the presence of nucleic acid sequences from the Human parechovirus RNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Descriptions

LP262453-6   Parechovirus A
The Parechovirus belongs to the family Picornaviridae and is a small, nonenveloped RNA virus with icosahedral capsids. There are two species of Parechovirus including Parechovirus A (HPeV), previously named Human parechovirus, and Parechovirus B, previously named Ljungan virus. HPeV is made up of nineteen types designated as HPeV-1 to HPeV-19. Human infection by HPeV occurs worldwide and is often asymptomatic. Transmission of HPeV is by the fecal-oral route, respiratory secretions and fomites. When symptoms occur, they usually consist of mild gastroenteritis and respiratory symptoms. More serious disease has been attributed to HPeV-3, which can cause neonatal sepsis and aseptic meningitis in children. In 9 out of 10 neonates infected with HPeV-3, there is white matter damage which can lead to cerebral palsy, epilepsy and learning disabilities. There is no FDA approved anti-viral treatment for HPeV available, though there are some therapies in development that target viral capsid proteins, proteases and polymerase. http://www.picornaviridae.com/parechovirus/parechovirus.htmhttps://wwwnc.cdc.gov/eid/article/20/1/pdfs/13-0569.pdf Source: Regenstrief LOINC

Fully-Specified Name

Component
Parechovirus A RNA
Property
PrThr
Time
Pt
System
CSF
Scale
Ord
Method
Non-probe.amp.tar

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.83 (MIN)
Change Reason
Updated Component from 'Human parechovirus' to 'Parechovirus A' according to the currently accepted nomenclature.http://www.picornaviridae.com/parechovirus/parechovirus.htm
Order vs. Observation
Both
Common Test Rank Get Info
2615

Example Answer List LL744-4

AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Member of these Panels

LOINCLong Common Name
82180-1Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Parechovirus A RNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
el-GRGreek (Greece)Παρεκοϊός Α RNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου
Synonyms: A MICRO Ord PrThr Pt RNA Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου ΕΝΥ Παρεκοϊός Παρεκοϊός Α Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ESSpanish (Spain)Parechovirus A RNA:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MXSpanish (Mexico)Parechovirus A ARN:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CAFrench (Canada)Paréchovirus A ARN:Présence-Seuil:Temps ponctuel:LCR:Ordinal:Non-sonde.amplification de cible
fr-FRFrench (France)Paréchovirus A ARN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)Parechovirus A RNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PLPolish (Poland)Parechowirus A RNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Ludzki parechowirus Ludzki parechowirus A RNA ludzkiego parechowirusa A
zh-CNChinese (China)副肠孤病毒 A RNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向
Synonyms: A 型 CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向 副肠孤病毒（双埃柯病毒、双埃可病毒） A 双埃柯病毒属;副肠孤病毒属;双埃柯病毒;双埃可病毒;Parechovirus;PeV;副腸孤病毒屬 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 核糖核酸;Ribonucleic acid 经过扩增的 脊液 脊髓液 脑脊液（Cerebral spinal fluid，CSF） 脑脊髓液 脱氧核糖核酸探针

82194-2 Enterovirus RNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

Term Description

This assay detects the presence of nucleic acid sequences from the Enterovirus RNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Descriptions

LP16864-8   Enterovirus
Enteroviruses are small, non-enveloped, single stranded RNA viruses in the picornavirus family and include coxsackievirus, rhinovirus, echovirus, and poliovirus species. They are the most common viral pathogen worldwide, and clinical manifestations range from mild, cold-like symptoms to severe infections, including encephalitis, aseptic (viral) meningitis, and myocarditis. Enterovirus infection has also been associated with the onset of type I diabetes mellitus. PMID: 23764548 Source: Regenstrief LOINC, PMID: 23764548

Fully-Specified Name

Component
Enterovirus RNA
Property
PrThr
Time
Pt
System
CSF
Scale
Ord
Method
Non-probe.amp.tar

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.83 (MIN)
Order vs. Observation
Both
Common Test Rank Get Info
4252

Example Answer List LL744-4

AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Member of these Panels

LOINCLong Common Name
82180-1Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Enterovirus RNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
de-DEGerman (Germany)Enterovirus RNA:Nachweis oder Schwellenwert:Zeitpunkt:Liquor:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
Synonyms: Zerebrospinalflüssigkeit
el-GRGreek (Greece)Εντεροϊός RNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου
Synonyms: MICRO Ord PrThr Pt RNA Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Εντεροϊός ΕΝΥ Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ESSpanish (Spain)Enterovirus RNA:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MXSpanish (Mexico)ARN de enterovirus:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CAFrench (Canada)Entérovirus ARN:Présence-Seuil:Temps ponctuel:LCR:Ordinal:Non-sonde.amplification de cible
fr-FRFrench (France)Entérovirus ARN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)Enterovirus RNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PLPolish (Poland)Enterowirus RNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Enterowirus RNA Enterowirusa
zh-CNChinese (China)肠道病毒 RNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向
Synonyms: CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 EV RNA EV;肠病毒 EV-PCR 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 核糖核酸;Ribonucleic acid 经过扩增的 肠病毒 RNA 肠病毒PCR 肠病毒探针.扩增.靶向 肠病毒探针靶向扩增 肠道病毒PCR 肠道病毒探针靶向扩增 脊液 脊髓液 脑脊液（Cerebral spinal fluid，CSF） 脑脊髓液 脱氧核糖核酸探针