88569-9
Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection
Active
88163-1 Acanthamoeba sp DNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP14798-0 Acanthamoeba sp
Acanthamoeba species are ubiquitous soil and freshwater protozoa that have been associated with infections of the human brain, skin, lungs and eyes. Species of Acanthamoeba are distinguished mainly in the form of cysts, and include the following; those marked with an asterisk are known to cause infections. A. astronyxis*, A. castellanii*, A. comandoni, A. culbertsoni*, A. divionensis, A. griffini, A. hatchetti*, A. healyi, A. jacobsi, A. lenticulata, A. lugdunensis*, A. mauritaniensis, A. palestinensis*, A. pearcei, A. polyphaga*, A. pustulosa, A. quina*, A. rhysodes*, A. royreba, A. terricola (renamed A.castellanii Poussard), A. triangularis, and A. tubiashi. Diseases caused by Acanthamoeba include amoebic keratitis and encephalitis.The latter is caused by Acanthamoeba entering cuts and spreading to the central nervous system.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Acanthamoeba
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Acanthamoeba sp DNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- Acanthamoeba DNA Corn/Cnjt Ql NAA+probe
- Display Name
- Acanthamoeba sp DNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Acanthamoeba sp, Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
es-ES | Spanish (Spain) | Acanthamoeba sp ADN: |
es-MX | Spanish (Mexico) | ADN de Acanthamoeba sp: |
fr-FR | French (France) | Acanthamoeba ADN: |
it-IT | Italian (Italy) | Acanthamoeba sp DNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
zh-CN | Chinese (China) | 棘阿米巴属单个未知种 DNA: Synonyms: 依次型; |
88533-5 Adenovirus DNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP14061-3 Adenovirus
Adenoviruses, medium-sized (90-100 nm), non-enveloped icosohedral viruses with double-stranded DNA, have over 50 immunologically distinct types that cause infections in humans. Adenoviruses usually cause respiratory illness with symptoms ranging from the common cold to pneumonia, croup, and bronchitis. Adenoviruses can cause other illnesses such as gastroenteritis, conjunctivitis, cystitis, and less commonly, neurological disease. Infants and individuals with weakened immune systems are at high risk for severe complications of adenovirus infection and adenoviruses commonly cause acute respiratory illness in military recruits. Some asymptomatic people infected with adenoviruses have ongoing infections in their tonsils, adenoids, and intestines and can shed the virus for months or years. The virus can persist outside the body for long periods. Adenovirus infections can be detected using antigen detection, polymerase chain reaction assay, virus isolation, and serology. Typing is usually done by hemagglutination-inhibition and/or neutralization with type-specific antisera or by molecular methods. As of October 2014 there is no adenovirus vaccine for the general public, however an oral vaccine against types 4 and 7 was approved by the U.S. Food and Drug Administration in March 2011 for U.S. military personnel. The vaccine is recommended by the U.S. Department of Defense for military recruits entering basic training in order to prevent acute respiratory disease. Most adenovirus infections are mild and typically require only treatment of symptoms.
Source: Centers for Disease Control and Prevention, CDC: Adenovirus
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Adenovirus DNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- HAdV DNA Corn/Cnjt Ql NAA+probe
- Display Name
- Adenovirus DNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Adenovirus, Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.64
- Last Updated
- Version 2.64
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Member of these Groups Get Info
LOINC Group | Group Name |
---|---|
LG51617-5 | Adenovirus DNA| |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Adenovirus DNA: |
es-ES | Spanish (Spain) | Adenovirus ADN: |
es-MX | Spanish (Mexico) | ADN de adenovirus: |
fr-FR | French (France) | Adénovirus ADN: |
it-IT | Italian (Italy) | Adenovirus DNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
zh-CN | Chinese (China) | 腺病毒 DNA: Synonyms: AdV; |
35710-3 Chlamydia sp DNA [Presence] in Conjunctival specimen by NAA with probe detection
Part Descriptions
LP14250-2 Chlamydia sp
Chlamydia refers to a genus of bacteria that are obligate intracellular parasites. Chlamydia infections are the most common bacterial sexually transmitted infections in humans and are the leading cause of infectious blindness worldwide. The three Chlamydia species include Chlamydia trachomatis (a human pathogen), Chlamydia suis (affects only swine), and Chlamydia muridarum (affects only mice and hamsters). Prior to 1999, the Chlamydia genus included two clinically relevant species that are presently in the genus Chlamydophila, Chlamydophila pneumoniae and Chlamydophila psittaci. Both were moved to the Chlamydophila genus.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Wikipedia
Fully-Specified Name
- Component
- Chlamydia sp DNA
- Property
- PrThr
- Time
- Pt
- System
- Cnjt
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- Chlamydia DNA Conjunct Ql NAA+probe
- Display Name
- Chlamydia sp DNA NAA+probe Ql (Conj)
- Consumer Name Alpha Get Info
- Chlamydia sp, Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.13
- Last Updated
- Version 2.73
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Both
- Common Test Rank Get Info
- 8007
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
es-AR | Spanish (Argentina) | [anticuerpo anti - ] especie de Chlamydia [Ac]: |
es-ES | Spanish (Spain) | Chlamydia sp ADN: |
es-MX | Spanish (Mexico) | ADN de Chlamydia sp: |
fr-CA | French (Canada) | Chlamydia sp, ADN: |
fr-FR | French (France) | Chlamydia ADN: |
fr-BE | French (Belgium) | Chlamydia sp ADN: |
it-IT | Italian (Italy) | Clamidia sp DNA: Synonyms: Campione congiuntivale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
ko-KR | Korean (Korea, Republic Of) | 클라미디아종 디옥시리보핵산: |
nl-NL | Dutch (Netherlands) | Chlamydia sp. DNA: Synonyms: probe.amp.tar |
pt-BR | Portuguese (Brazil) | Chlamydia sp DNA: Synonyms: Deoxyribonucleic acid; |
ru-RU | Russian (Russian Federation) | Chlamydia sp ДНК: Synonyms: ДНК проба; |
tr-TR | Turkish (Turkey) | Chlamydia sp DNA: Synonyms: Mevcut |
zh-CN | Chinese (China) | 衣原体属单个未知种 DNA: Synonyms: 依次型; |
35712-9 Chlamydia sp rRNA [Presence] in Conjunctival specimen by Probe
Part Descriptions
LP14250-2 Chlamydia sp
Chlamydia refers to a genus of bacteria that are obligate intracellular parasites. Chlamydia infections are the most common bacterial sexually transmitted infections in humans and are the leading cause of infectious blindness worldwide. The three Chlamydia species include Chlamydia trachomatis (a human pathogen), Chlamydia suis (affects only swine), and Chlamydia muridarum (affects only mice and hamsters). Prior to 1999, the Chlamydia genus included two clinically relevant species that are presently in the genus Chlamydophila, Chlamydophila pneumoniae and Chlamydophila psittaci. Both were moved to the Chlamydophila genus.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Wikipedia
Fully-Specified Name
- Component
- Chlamydia sp rRNA
- Property
- PrThr
- Time
- Pt
- System
- Cnjt
- Scale
- Ord
- Method
- Probe
Additional Names
- Short Name
- Chlamydia rRNA Conjunct Ql Probe
- Display Name
- Chlamydia sp rRNA Probe Ql (Conj)
- Consumer Name Alpha Get Info
- Chlamydia sp, Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.13
- Last Updated
- Version 2.63
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Both
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
es-AR | Spanish (Argentina) | [anticuerpo anti - ] especie de Chlamydia [Ac]: |
es-ES | Spanish (Spain) | Chlamydia sp rRNA: |
es-MX | Spanish (Mexico) | ARNr de clamidia sp: |
fr-CA | French (Canada) | Chlamydia sp, ARNr: |
fr-FR | French (France) | Chlamydia ARNr: |
fr-BE | French (Belgium) | Chlamydia sp ARNr: |
it-IT | Italian (Italy) | Clamidia sp rRNA: Synonyms: Campione congiuntivale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda di DNA |
ko-KR | Korean (Korea, Republic Of) | 클라미디아종 리보솜 리보핵산: |
nl-NL | Dutch (Netherlands) | Chlamydia sp. rRNA: Synonyms: ribosomaal RNA |
pt-BR | Portuguese (Brazil) | Chlamydia sp rRNA: Synonyms: Arbitrary concentration; |
ru-RU | Russian (Russian Federation) | Chlamydia sp рРНК: Synonyms: ДНК проба; |
tr-TR | Turkish (Turkey) | Chlamydia sp rRNA: Synonyms: Mevcut |
zh-CN | Chinese (China) | 衣原体属单个未知种 rRNA: Synonyms: 依次型; |
21187-0 Chlamydia trachomatis DNA [Presence] in Conjunctival specimen by NAA with probe detection
Part Descriptions
LP14298-1 Chlamydia trachomatis
Chlamydia trachomatis is one of three bacterial species in the genus Chlamydia, family Chlamydiaceae, class Chlamydiae. C. trachomatis has only been found living inside human cells . It causes urethritis , epididymitis, and proctitis in men and cervicitis, salpingitis, urethritis and proctitis in women. C. trachomatis has also been detected in some patients with temporomandibular joint (TMJ) disease. It may be treated with any of several antibiotics such as azithromycin, erythromycin or doxycyclinetetracycline. C. trachomatis was the first chlamydial agent discovered in humans. It comprises two human biovars: trachoma and lymphogranuloma venereum (LGV). Many, but not all, C. trachomatis strains have an extrachromosomal plasmid.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Chlamydia trachomatis (Wikipedia)
LP14298-1 Chlamydia trachomatis
Species of chlamydia causing a variety of ocular and urogenital diseases.
Source: National Library of Medicine, MeSH 2006
Fully-Specified Name
- Component
- Chlamydia trachomatis DNA
- Property
- PrThr
- Time
- Pt
- System
- Cnjt
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- C trach DNA Conjunct Ql NAA+probe
- Display Name
- C. trachomatis DNA NAA+probe Ql (Conj)
- Consumer Name Alpha Get Info
- Chlamydia trachomatis, Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 1.0m
- Last Updated
- Version 2.73
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Both
- Common Test Rank Get Info
- 18643
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Member of these Groups Get Info
LOINC Group | Group Name |
---|---|
LG41611-1 | Chlamydia trachomatis |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-AT | German (Austria) | Synonyms: Chlamydia trach.DNA /Conjunctiva PCR |
de-DE | German (Germany) | Chlamydia trachomatis DNA: Synonyms: Chlamydia trachomatis |
es-AR | Spanish (Argentina) | ADN de Chlamydia trachomatis: |
es-ES | Spanish (Spain) | Chlamydia trachomatis ADN: |
es-MX | Spanish (Mexico) | ADN de Chlamydia trachomatis: |
fr-CA | French (Canada) | Chlamydia trachomatis, ADN: |
fr-FR | French (France) | Chlamydia trachomatis ADN: |
fr-BE | French (Belgium) | Chlamydia trachomatis ADN: |
it-IT | Italian (Italy) | Chlamydia trachomatis DNA: Synonyms: Campione congiuntivale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
ko-KR | Korean (Korea, Republic Of) | 클라미디아 트라코마티스 디옥시리보핵산: |
nl-NL | Dutch (Netherlands) | Chlamydia trachomatis DNA: Synonyms: probe.amp.tar |
pt-BR | Portuguese (Brazil) | Chlamydia trachomatis DNA: Synonyms: Deoxyribonucleic acid; |
ru-RU | Russian (Russian Federation) | Chlamydia trachomatis ДНК: Synonyms: ДНК проба; |
tr-TR | Turkish (Turkey) | Chlamydia trachomatis DNA: Synonyms: Mevcut |
zh-CN | Chinese (China) | 沙眼衣原体 DNA: Synonyms: 依次型; |
21188-8 Chlamydia trachomatis rRNA [Presence] in Conjunctival specimen by Probe
Part Descriptions
LP14298-1 Chlamydia trachomatis
Chlamydia trachomatis is one of three bacterial species in the genus Chlamydia, family Chlamydiaceae, class Chlamydiae. C. trachomatis has only been found living inside human cells . It causes urethritis , epididymitis, and proctitis in men and cervicitis, salpingitis, urethritis and proctitis in women. C. trachomatis has also been detected in some patients with temporomandibular joint (TMJ) disease. It may be treated with any of several antibiotics such as azithromycin, erythromycin or doxycyclinetetracycline. C. trachomatis was the first chlamydial agent discovered in humans. It comprises two human biovars: trachoma and lymphogranuloma venereum (LGV). Many, but not all, C. trachomatis strains have an extrachromosomal plasmid.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Chlamydia trachomatis (Wikipedia)
LP14298-1 Chlamydia trachomatis
Species of chlamydia causing a variety of ocular and urogenital diseases.
Source: National Library of Medicine, MeSH 2006
LP37619-1 Chlamydia trachomatis rRNA
A target amplification nucleic acid probe that utilizes target capture for in vitro qualitative detection and differentiation of ribosomal RNA (rRNA) from Chlamydia trachomatis. Specimens include vaginal and male urethral swabs as well as female and male urine specimens. Chlamydia trachomatis is the number one cause of sexually transmitted disease in the United States. Infants born to women with chlamydial infection of the cervix are at risk of acquiring an infection during vaginal birth.
Source: Regenstrief Institute
Fully-Specified Name
- Component
- Chlamydia trachomatis rRNA
- Property
- PrThr
- Time
- Pt
- System
- Cnjt
- Scale
- Ord
- Method
- Probe
Additional Names
- Short Name
- C trach rRNA Conjunct Ql Probe
- Display Name
- C. trachomatis rRNA Probe Ql (Conj)
- Consumer Name Alpha Get Info
- Chlamydia trachomatis, Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 1.0m
- Last Updated
- Version 2.73
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Both
- Common Test Rank Get Info
- 13670
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Member of these Groups Get Info
LOINC Group | Group Name |
---|---|
LG41611-1 | Chlamydia trachomatis |
LG51344-6 | Chlamydia trachomatis rRNA| |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Chlamydia trachomatis rRNA: Synonyms: Chlamydia trachomatis |
es-AR | Spanish (Argentina) | ADN de Chlamydia trachomatis: |
es-ES | Spanish (Spain) | Chlamydia trachomatis rRNA: |
es-MX | Spanish (Mexico) | ARNr de Chlamydia trachomatis: |
fr-CA | French (Canada) | Chlamydia trachomatis, ARNr: |
fr-FR | French (France) | Chlamydia trachomatis ARNr: |
fr-BE | French (Belgium) | Chlamydia trachomatis ARNr: |
it-IT | Italian (Italy) | Chlamydia trachomatis rRNA: Synonyms: Campione congiuntivale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda di DNA |
ko-KR | Korean (Korea, Republic Of) | 클라미디아 트라코마티스 리보솜 리보핵산: |
nl-NL | Dutch (Netherlands) | Chlamydia trachomatis rRNA: Synonyms: ribosomaal RNA |
pt-BR | Portuguese (Brazil) | Chlamydia trachomatis rRNA: Synonyms: ; |
ru-RU | Russian (Russian Federation) | Chlamydia trachomatis рРНК: Synonyms: ДНК проба; |
tr-TR | Turkish (Turkey) | Chlamydia trachomatis rRNA: Synonyms: Mevcut |
zh-CN | Chinese (China) | 沙眼衣原体 rRNA: Synonyms: 依次型; |
88128-4 Herpes simplex virus 1 DNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP14821-0 Herpes simplex virus 1
Herpes simplex virus 1 and 2 (HSV-1 and HSV-2) are two species of the herpes virus family, Herpesviridae, which cause infections in humans. Eight members of herpes virus family infect humans and cause a variety of illnesses including cold sores, chickenpox or varicella, shingles or herpes zoster (VZV), cytomegalovirus (CMV). Some herpes viruses have been implicated in certain cancers and in the inflammation of the brain (encephalitis). All viruses in the herpes family produce life-long infections.
They are also called Human Herpes Virus 1 and 2 (HHV-1 and HHV-2) and are neurotropic and neuroinvasive viruses; they enter and hide in the human nervous system, accounting for their durability in the human body. HSV-1 is commonly associated with herpes outbreaks of the face known as cold sores or fever blisters, whereas HSV-2 is more often associated with genital herpes.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Herpes simplex virus 1
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Herpes simplex virus 1 DNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- HSV1 DNA Corn/Cnjt Ql NAA+probe
- Display Name
- HSV 1 DNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Herpes simplex virus 1 (HSV 1), Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
es-ES | Spanish (Spain) | Virus Herpes simplex 1 ADN: |
es-MX | Spanish (Mexico) | ADN del virus del herpes simplex 1: |
fr-FR | French (France) | Herpes simplex virus 1 ADN: |
it-IT | Italian (Italy) | Herpes simplex, virus 1 DNA: Synonyms: Cornea o congiuntiva HSV HSV-1 Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
zh-CN | Chinese (China) | 单纯疱疹病毒 1 型 DNA: Synonyms: Ⅰ HSV; |
88133-4 Herpes simplex virus 2 DNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP14401-1 Herpes simplex virus 2
Herpes simplex virus 1 and 2 (HSV-1 and HSV-2) are two species of the herpes virus family, Herpesviridae, which cause infections in humans. Eight members of herpes virus family infect humans and cause a variety of illnesses including cold sores, chickenpox or varicella, shingles or herpes zoster (VZV), cytomegalovirus (CMV). Some herpes viruses have been implicated in certain cancers and in the inflammation of the brain (encephalitis). All viruses in the herpes family produce life-long infections.
They are also called Human Herpes Virus 1 and 2 (HHV-1 and HHV-2) and are neurotropic and neuroinvasive viruses; they enter and hide in the human nervous system, accounting for their durability in the human body. HSV-1 is commonly associated with herpes outbreaks of the face known as cold sores or fever blisters, whereas HSV-2 is more often associated with genital herpes.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Herpes simplex virus 1
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Herpes simplex virus 2 DNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- HSV2 DNA Corn/Cnjt Ql NAA+probe
- Display Name
- HSV 2 DNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Herpes simplex virus 2 (HSV 2), Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
es-ES | Spanish (Spain) | Virus Herpes simplex 2 ADN: |
es-MX | Spanish (Mexico) | ADN del virus del herpes simplex 2: |
fr-FR | French (France) | Herpes simplex virus 2 ADN: |
it-IT | Italian (Italy) | Herpes simplex virus 2 DNA: Synonyms: Cornea o congiuntiva HSV HSV-2 Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
zh-CN | Chinese (China) | 单纯疱疹病毒 2 型 DNA: Synonyms: Ⅱ HSV; |
88138-3 Herpes simplex virus DNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP14558-8 Herpes simplex virus
The herpes simplex virus (HSV) manifests itself in two common viral infections, each marked by painful, watery blisters in the skin or mucous membranes (such as the mouth or lips) or on the genitals. The disease is contagious, particularly during an outbreak, and is incurable with present technology. An infection on the lips is commonly known as a cold sore or fever blister. These are sometimes confused with canker sores or aphthous ulcers, which have a similar appearance; these appear inside the mouth and are not caused by the herpes simplex virus. When not symptomatic HSV lies dormant in nerve cells, growing along the axons of the skin during an outbreak. When the outbreak has passed, the virus 'dies back' along the nerve until it is only present in the nerve body. The dormancy of the virus within the nerve bodies contributes to the difficulty of treatment.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Herpes simplex virus (Wikipedia)
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Herpes simplex virus DNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- HSV DNA Corn/Cnjt Ql NAA+probe
- Display Name
- HSV DNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Herpes simplex virus (HSV), Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
es-ES | Spanish (Spain) | Virus Herpes simplex ADN: |
es-MX | Spanish (Mexico) | ADN del virus del herpes simplex: |
fr-FR | French (France) | Herpes simplex virus ADN: |
it-IT | Italian (Italy) | Herpes simplex, virus DNA: Synonyms: Cornea o congiuntiva HSV Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
zh-CN | Chinese (China) | 单纯疱疹病毒 DNA: Synonyms: HSV DNA HSV; |
88534-3 Human metapneumovirus RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
LP34982-6 Human metapneumovirus
Human metapneumovirus (hMPV) is a Paramyxoviridae family virus that causes upper and lower respiratory tract infections in the very young, elderly and those with compromised immune systems. hMPV can vary in its size, shape and staining properties, and shares similar structure with avian pneumovirus (aMPV) and human respiratory syncytial virus (hRSV). Typically, molecular testing methods, like reverse transcriptase PCR (RT-PCR), are used to detect hMPV. hMPV is thought to be responsible for about 5% to 10% of pediatric hospitalizations of those suffering from acute respiratory tract infection. PMID: 24841931
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Human metapneumovirus RNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- hMPV RNA Corn/Cnjt Ql NAA+probe
- Display Name
- hMPV RNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Human metapneumovirus, Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.64
- Last Updated
- Version 2.64
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
es-ES | Spanish (Spain) | Metaneumovirus humano RNA: |
es-MX | Spanish (Mexico) | ARN del metaneumovirus humano: |
fr-FR | French (France) | Métapneumovirus humain ARN: |
it-IT | Italian (Italy) | Metapneumovirus umano RNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
zh-CN | Chinese (China) | 人类偏肺病毒 RNA: Synonyms: hMPV RNA hMPV; |
88193-8 Influenza virus A RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP14239-5 Influenza virus A
Influenza viruses, from the family Orthomyxoviridae, are enveloped negative-strand RNA viruses with segmented genomes containing seven to eight gene segments. Of the five genera in the family, only influenza A virus (IAV), influenza B and C are medically relevant to humans. Aquatic birds harboring avian IAV are the likely natural reservoir for all known IAV subtypes and are probably the original source of all human pandemic IAV strains. IAV maintained in wild birds have been associated with stable host switch events to novel hosts, including most often to domestic poultry but also to horses, swine, toothed whales and humans. The influenza virus life cycle begins with the binding of viral HA to host cell receptors. Endocytosis and HA-mediated fusion of the viral and cellular membranes occurs. Viral ribonucleoprotein complexes are released into the cytoplasm, travel to the nucleus, then are replicated and transcribed by the viral polymerase complex. The new viruses are formed and bud when the newly formed ribonucleicprotein complexes and structural proteins reach the plasma membrane. Further research is needed to better understand how IAVs switch hosts and the viral genetic changes that underlie human adaptation. IAV causes respiratory infections in humans ranging from asymptomatic to fatal. Pandemics are attributed to "novel" viruses which possess a viral hemagglutinin (HA) to which humans do not have immunity. PMID: 20542248 ] PMID: 25812763
Influenza viruses A and B are single-stranded RNA enveloped viruses belonging to the Orthomyxoviridae family. The symptoms of infection of Influenza A and B include fever, cough, sore throat, rhinorrhea, nasal congestion, headache, myalgia and malaise. Some patients may experience gastrointestinal symptoms including watery diarrhea, vomiting and abdominal pain. The influenza viruses spread rapidly in enclosed spaces with a documented rate of infection of 70% following a common source of exposure. Infection occurs in the respiratory epithelium in both the upper and lower respiratory tract, and the virus can be found in many specimen types, including nasal aspirates, nasal or nasopharyngeal swabs, throat swabs, sputum and tracheal aspirates. When infection rates reach epidemic proportions, hospitalization of children and elderly patients rises as does the mortality rates of elderly patients.(Manual of Clinical Microbiology, 11th edition, James H. Jorgensen; Karen C. Carroll; Guido Funke; Michael A Pfaller; Marie Louise Landry; Sandra S. Richter; David W. Warnock)
Source: Regenstrief LOINC
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Influenza virus A RNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- FLUAV RNA Corn/Cnjt Ql NAA+probe
- Display Name
- FLUAV RNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Influenza A (Flu A), Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
90455-7 | Influenza virus types A and B panel - Cornea or Conjunctiva by NAA with probe detection |
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Member of these Groups Get Info
LOINC Group | Group Name |
---|---|
LG32757-3 | Influenza virus |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Influenza-Virus A RNA: |
es-ES | Spanish (Spain) | Virus Influenza A RNA: |
es-MX | Spanish (Mexico) | ARN del virus de la influenza A: |
fr-FR | French (France) | Influenza virus A ARN: |
it-IT | Italian (Italy) | Influenza A, virus RNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza A |
zh-CN | Chinese (China) | 流感病毒 A 型 RNA: Synonyms: A 型 A 型流感; |
88187-0 Influenza virus A subtype [Identifier] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Influenza virus A subtype
- Property
- Prid
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Nom
- Method
- Probe.amp.tar
Additional Names
- Short Name
- FLUAV Subtyp Corn/Cnjt NAA+probe
- Display Name
- FLUAV subtyp NAA+probe Nom (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Influenza A Subtyp, Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL898-8
Answer | Code | Score | Answer ID |
---|---|---|---|
Influenza A (H1) | PLR1 | LA13023-9 | |
Influenza A (H3) | PLR3 | LA13024-7 | |
Influenza A (H5) | PLR5 | LA13025-4 | |
Inconclusive for Influenza A (H1) 2009 pandemic | PLR61 | LA13026-2 | |
Influenza A (H1) 2009 pandemic detected | PLR65 | LA13027-0 | |
Inconclusive for Influenza A (H5) asian lineage | PLR69 | LA13028-8 | |
Influenza A (unsubtypable) | PLR19 | LA13029-6 | |
Influenza A virus Copyright http://snomed.info/sct ID:407479009 Influenza A virus (organism) | LA11919-0 |
Member of these Panels
LOINC | Long Common Name |
---|---|
90455-7 | Influenza virus types A and B panel - Cornea or Conjunctiva by NAA with probe detection |
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Member of these Groups Get Info
LOINC Group | Group Name |
---|---|
LG32757-3 | Influenza virus |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Influenza-Virus-A-Subtyp: |
es-ES | Spanish (Spain) | Virus Influenza subtipo A: |
es-MX | Spanish (Mexico) | Subtipo A del virus de la influenza: |
fr-FR | French (France) | Influenza virus A sous-type: |
it-IT | Italian (Italy) | Influenza virus A, sottotipo: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Identità Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Sottotipo di virus dell''influenza A Virus dell''influenza Virus dell''influenza A |
zh-CN | Chinese (China) | 流感病毒 A 型亚型: Synonyms: A 型 A 型流感; |
Third Party Copyright
This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.
This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.
Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to http://www.snomed.org/snomed-ct/get-snomed-ct or info@snomed.org<mailto:info@snomed.org>. This may incur a fee in SNOMED International non-Member countries.
88195-3 Influenza virus B RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP14240-3 Influenza virus B
Influenza virus from the family Orthomyxoviridae are enveloped negative-strand RNA viruses with segmented genomes containing seven to eight gene segments. Of the five genera in the family, only influenza A virus (IAV), influenza B and C viruses are medically relevant to humans. Influenza A and B viruses have a similar structure whereby these viruses each contain eight discrete single-stranded RNA gene segments, each encoding at least one protein. While having a close phylogenetic relationship, influenza virus types A and B manifest very differently. While IAV infects birds, humans and other mammals, influenza B only infects humans and seals. Although both viruses cause human respiratory infection seasonally in temperate climate regions and more continually in the tropics, influenza B is normally less prevalent and causes less severe disease than IAV viruses. Research is ongoing to determine the evolutionary and epidemiological factors that shape the genetic diversity of influenza B virus. PMID: 25812763 [CDC:flu/about/viruses/types]
Source: Regenstrief LOINC
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Influenza virus B RNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- FLUBV RNA Corn/Cnjt Ql NAA+probe
- Display Name
- FLUBV RNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Influenza B (Flu B), Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
90455-7 | Influenza virus types A and B panel - Cornea or Conjunctiva by NAA with probe detection |
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Member of these Groups Get Info
LOINC Group | Group Name |
---|---|
LG32757-3 | Influenza virus |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Influenza-Virus B RNA: |
es-ES | Spanish (Spain) | Virus Influenza B RNA: |
es-MX | Spanish (Mexico) | ARN del virus de la influenza B: |
fr-FR | French (France) | Influenza virus B ARN: |
it-IT | Italian (Italy) | Influenza B, virus RNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza B |
zh-CN | Chinese (China) | 流感病毒 B 型 RNA: Synonyms: B 型 B 型流感; |
88160-7 Microsporidia DNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP14825-1 Microsporidia
A phylum of fungi comprising minute intracellular PARASITES with FUNGAL SPORES of unicellular origin. It has two classes: Rudimicrosporea and MICROSPOREA.
Source: National Library of Medicine, MeSH 2006
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Microsporidia DNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- Microsporid DNA Corn/Cnjt Ql NAA+probe
- Display Name
- Microsporidia DNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Microsporidia, Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
es-ES | Spanish (Spain) | Microsporidios ADN: |
es-MX | Spanish (Mexico) | ADN de microsporidios: |
fr-FR | French (France) | Microsporidia ADN: |
it-IT | Italian (Italy) | Microsporidi DNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
zh-CN | Chinese (China) | 微孢子虫 DNA: Synonyms: 依次型; |
88198-7 Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP173753-7 Middle East respiratory syndrome coronavirus
Middle East Respiratory Syndrome (MERS) is an illness caused by the virus Middle East Respiratory Syndrome Coronovirus (MERS-CoV). The illness was first reported in Saudi Arabia in 2012, but was later found to have originated in Jordan in 2012. MERS has been found in camels leading to speculation that they may be the initial reservoir for the virus. The largest outbreak of MERS that has occurred outside of the Arabian Peninsula was in the Republic of Korea in 2015 and was linked to an individual who had been traveling in the Arabian Peninsula. The virus is probably spread through respiratory secretions from infected individuals though the exact mode of transmission is under investigation. Infection with MERS begins with an incubation period of 5-6 days followed by a severe acute illness that involves fever, shortness of breath and for patients with comorbidities or reduced immunity can lead to pneumonia and kidney failure. The mortality rate of MERS is 3-4 out of 10 people who are infected, though most of the people who die have underlying conditions. In addition, some people experience only cold-like symptoms and others have no symptoms at all. In the United States, most state laboratories are approved to test for MERS-CoV using the real-time reverse transcription-PCR assay developed by the CDC. The assay can be run on respiratory, serum and stool specimens.[CDC: coronavirus/mers]
Source: Regenstrief LOINC
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Middle East respiratory syndrome coronavirus RNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- MERS-CoV RNA Corn/Cnjt Ql NAA+probe
- Display Name
- MERS-CoV RNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Middle East respiratory syndrome coronavirus (MERS-CoV), Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Middle East respiratory syndrome coronavirus (MERS CoV) RNA: |
es-ES | Spanish (Spain) | Coronavirus del sindrome respiratorio de Oriente medio RNA: |
es-MX | Spanish (Mexico) | Síndrome respiratorio de Oriente Medio coronavirus ARN: |
fr-FR | French (France) | Coronavirus MERS ARN: |
it-IT | Italian (Italy) | Sindrome respiratoria mediorientale da Coronavirus (MERS) RNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
zh-CN | Chinese (China) | 中东呼吸综合征冠状病毒 RNA: Synonyms: 中东呼吸道综合征冠状病毒; |
88165-6 Mycobacterium tuberculosis DNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP16659-2 Mycobacterium tuberculosis
Mycobacterium tuberculosis was discovered by Robert Koch in 1882 to be the infectious organism of tuberculosis (TB). Tuberculosis is a worldwide public health problem, especially in third world countries. The infection is classified as latent when the patient is asymptomatic and the infection is in a non-transmissible state. The active form of TB is transmissible and can be diagnosed by culturing the organism or by using molecular testing. Patients who are symptomatic have symptoms including fever, fatigue, loss of appetite, weight loss, persistent cough, and hemoptysis. Treatment of TB has been complicated by the emergence of drug-resistant strains which are present all over the world. Resistance to all of the drugs used to treat TB has occurred including the first line of treatment drugs isoniazid, rifampicin, pyrazinamide, and ethambutol. Some strains of TB have become resistant to more than one of the drugs used to treat TB, and are referred to as either multidrug-resistant TB (MDR-TB) or extensively drug-resistant TB (XDR-TB). MDR-TB are defined to be resistant to at least isoniazid and rifampicin. XDR-TB have worse disease symptoms and are resistant to isoniazid, rifampicin, any one of the fluoroquinolones, and any one of the three injectable second-line drugs amikacin, kanamycin, and capreomycin. The biggest risk factor for acquiring TB is to be infected by the human immunodeficiency virus (HIV). Twenty-five percent of all TB infections occur in patients also infected with HIV, and most of those occur in Africa. Social and behavioral determinants such as excessive alcohol use, smoking, and type 2 diabetes mellitus can increase the risk of contracting TB by two to three times.[https://www.nature.com/articles/nrdp201676]
Source: Regenstrief LOINC
LP16659-2 Mycobacterium tuberculosis
Mycobacterium tuberculosis (MTB) is a pathogenic bacterial species in the genus Mycobacterium and the causative agent of most cases of tuberculosis (TB). M. tuberculosis has an unusual, waxy coating on its cell surface (primarily mycolic acid), which makes the cells impervious to Gram staining, so acid-fast detection techniques are used, instead. The physiology of M. tuberculosis is highly aerobic and requires high levels of oxygen. Primarily a pathogen of the mammalian respiratory system, MTB infects the lungs. The most frequently used diagnostic methods for TB are the tuberculin skin test, acid-fast stain, and chest radiographs
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Mycobacterium tuberculosis (Wikipedia)
LP16659-2 Mycobacterium tuberculosis
A species of gram-positive, aerobic bacteria that produces TUBERCULOSIS in humans, other primates, CATTLE; DOGS; and some other animals which have contact with humans. Growth tends to be in serpentine, cordlike masses in which the bacilli show a parallel orientation.
Source: National Library of Medicine, MeSH 2006
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Mycobacterium tuberculosis DNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- M tb DNA Corn/Cnjt Ql NAA+probe
- Display Name
- M. tuberculosis DNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Mycobacterium tuberculosis, Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Member of these Groups Get Info
LOINC Group | Group Name |
---|---|
LG50924-6 | Mycobacterium tuberculosis DNA| |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Mycobacterium tuberculosis DNA: |
es-ES | Spanish (Spain) | Mycobacterium tuberculosis ADN: |
es-MX | Spanish (Mexico) | ADN de Mycobacterium tuberculosis: |
fr-FR | French (France) | Mycobacterium tuberculosis ADN: |
it-IT | Italian (Italy) | Mycobacterium tuberculosis DNA: Synonyms: Cornea o congiuntiva Micobatterio della tubercolosi Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
zh-CN | Chinese (China) | 结核分枝杆菌 DNA: Synonyms: AFB 依次型; |
35735-0 Neisseria gonorrhoeae DNA [Presence] in Conjunctival specimen by NAA with probe detection
Part Descriptions
LP14316-1 Neisseria gonorrhoeae
Neisseria gonorrhoeae are gram-negative cocci usually seen in pairs with the adjacent sides flattened. Pili, filament-like appendages, extend from the cell surface and have a role in adherence. Gonorrhea is usually acquired by sexual contact. Men and women aged 15-29 have the highest incidence of gonorrhea. Number of sexual partners, sexual practices and preference, condom use and population mobility contribute to disease incidence. The most frequent sites are the cervix, urethra, rectum, pharynx and conjunctiva. The most common symptom in men is discharge that may be scanty and clear or cloudy to copious and purulent, and often dysuria. Asymptomatic men are an important reservoir for transmission. Endocervical infection is the most common form of infection in women. Ocular infections occur most commonly in newborns who are exposed in the birth canal and can lead to corneal scarring or perforation. Gonococcal bacteremia may lead to disseminated infection including pelvic inflammatory disease in as many as 15 percent of women, leading to an increased probability of infertility and ectopic pregnancy. While antibiotics have successfully treated gonorrhea for decades, N. gonorrhoeae has developed antimicrobial resistance to every drug used for treatment. The Centers for Disease Control and Prevention recommends combination therapy using two antimicrobials with different mechanisms of action (e.g., a cephalosporin plus azithromycin) to improve treatment efficacy and potentially slow the spread of resistance to cephalosporins. [NCBI Books:NBK7650] [CDC:std/tg2015/gonorrhea]
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Neisseria gonorrhoeae DNA
- Property
- PrThr
- Time
- Pt
- System
- Cnjt
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- N gonorrhoea DNA Conjunct Ql NAA+probe
- Display Name
- N. gonorrhoeae DNA NAA+probe Ql (Conj)
- Consumer Name Alpha Get Info
- Neisseria gonorrhoeae, Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.13
- Last Updated
- Version 2.73
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Both
- Common Test Rank Get Info
- 15605
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-AT | German (Austria) | Synonyms: Neiss. gonorrhoeae-DNA /Conjuctiva PCR |
de-DE | German (Germany) | Neisseria gonorrhoeae DNA: |
es-AR | Spanish (Argentina) | [anticuerpo anti - ] Neisseria gonorrhoeae [Ac]: |
es-ES | Spanish (Spain) | Neisseria gonorrhoeae ADN: |
es-MX | Spanish (Mexico) | ADN de Neisseria gonorrhoeae: |
fr-CA | French (Canada) | Neisseria gonorrhoeae, ADN: |
fr-FR | French (France) | Neisseria gonorrhoeae ADN: |
fr-BE | French (Belgium) | Neisseria gonorrhoeae ADN: |
it-IT | Italian (Italy) | Neisseria gonorrhoeae DNA: Synonyms: Campione congiuntivale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
ko-KR | Korean (Korea, Republic Of) | 임균 디옥시리보핵산: |
nl-NL | Dutch (Netherlands) | Neisseria gonorrhoeae DNA: Synonyms: probe.amp.tar |
pt-BR | Portuguese (Brazil) | Neisseria gonorrhoeae DNA: Synonyms: ; |
ru-RU | Russian (Russian Federation) | Neisseria gonorrhoeae ДНК: Synonyms: ДНК проба; |
tr-TR | Turkish (Turkey) | Neisseria gonorrhoeae DNA: Synonyms: Mevcut |
zh-CN | Chinese (China) | 淋病奈瑟菌 DNA: Synonyms: 依次型; |
33904-4 Neisseria gonorrhoeae rRNA [Presence] in Conjunctival specimen by Probe
Part Descriptions
LP14316-1 Neisseria gonorrhoeae
Neisseria gonorrhoeae are gram-negative cocci usually seen in pairs with the adjacent sides flattened. Pili, filament-like appendages, extend from the cell surface and have a role in adherence. Gonorrhea is usually acquired by sexual contact. Men and women aged 15-29 have the highest incidence of gonorrhea. Number of sexual partners, sexual practices and preference, condom use and population mobility contribute to disease incidence. The most frequent sites are the cervix, urethra, rectum, pharynx and conjunctiva. The most common symptom in men is discharge that may be scanty and clear or cloudy to copious and purulent, and often dysuria. Asymptomatic men are an important reservoir for transmission. Endocervical infection is the most common form of infection in women. Ocular infections occur most commonly in newborns who are exposed in the birth canal and can lead to corneal scarring or perforation. Gonococcal bacteremia may lead to disseminated infection including pelvic inflammatory disease in as many as 15 percent of women, leading to an increased probability of infertility and ectopic pregnancy. While antibiotics have successfully treated gonorrhea for decades, N. gonorrhoeae has developed antimicrobial resistance to every drug used for treatment. The Centers for Disease Control and Prevention recommends combination therapy using two antimicrobials with different mechanisms of action (e.g., a cephalosporin plus azithromycin) to improve treatment efficacy and potentially slow the spread of resistance to cephalosporins. [NCBI Books:NBK7650] [CDC:std/tg2015/gonorrhea]
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Neisseria gonorrhoeae rRNA
- Property
- PrThr
- Time
- Pt
- System
- Cnjt
- Scale
- Ord
- Method
- Probe
Additional Names
- Short Name
- N gonorrhoea rRNA Conjunct Ql Probe
- Display Name
- N. gonorrhoeae rRNA Probe Ql (Conj)
- Consumer Name Alpha Get Info
- Neisseria gonorrhoeae, Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.09
- Last Updated
- Version 2.73
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
- Order vs. Observation
- Both
- Common Test Rank Get Info
- 18158
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Member of these Groups Get Info
LOINC Group | Group Name |
---|---|
LG51345-3 | Neisseria gonorrhoeae rRNA| |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Neisseria gonorrhoeae rRNA: |
es-AR | Spanish (Argentina) | ADN de Neisseria gonorrhoeae: |
es-ES | Spanish (Spain) | Neisseria gonorrhoeae rRNA: |
es-MX | Spanish (Mexico) | ARNr de Neisseria gonorrhoeae: |
fr-CA | French (Canada) | Neisseria gonorrhoeae, ARNr: |
fr-FR | French (France) | Neisseria gonorrhoeae ARNr: |
fr-BE | French (Belgium) | Neisseria gonorrhoeae ARNr: |
it-IT | Italian (Italy) | Neisseria gonorrhoeae rRNA: Synonyms: Campione congiuntivale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda di DNA |
ko-KR | Korean (Korea, Republic Of) | 임균 리보솜 리보핵산: |
nl-NL | Dutch (Netherlands) | Neisseria gonorrhoeae rRNA: Synonyms: ribosomaal RNA |
pt-BR | Portuguese (Brazil) | Neisseria gonorrhoeae rRNA: Synonyms: ; |
ru-RU | Russian (Russian Federation) | Neisseria gonorrhoeae рРНК: Synonyms: ДНК проба; |
tr-TR | Turkish (Turkey) | Neisseria gonorrhoeae rRNA: Synonyms: Mevcut |
zh-CN | Chinese (China) | 淋病奈瑟菌 rRNA: Synonyms: 依次型; |
88208-4 Parainfluenza virus 1 RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP14241-1 Parainfluenza virus 1
HPIV-1 causes biennial outbreaks of croup in the fall (presently in the United States during odd numbered years). HPIVs are negative-sense, single-stranded RNA viruses that possess fusion and hemagglutinin-neuraminidase glycoprotein "spikes" on their surface. HPIVs are spread from respiratory secretions through close contact with infected persons or contact with contaminated surfaces or objects. HPIVs are ubiquitous and infect most people during childhood.
Source: Regenstrief Institute
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Parainfluenza virus 1 RNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- HPIV1 RNA Corn/Cnjt Ql NAA+probe
- Display Name
- Parainfluenza virus 1 RNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Parainfluenza virus 1, Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Parainfluenza-Virus 1 RNA: Synonyms: Human respirovirus 1 |
es-ES | Spanish (Spain) | Virus parainfluenza tipo 1 RNA: |
es-MX | Spanish (Mexico) | ARN del virus de la parainfluenza 1: |
fr-FR | French (France) | Parainfluenza virus 1 ARN: |
it-IT | Italian (Italy) | Parainfluenza virus 1 RNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus parainfluenzale Virus parainfluenzale di tipo 1 |
zh-CN | Chinese (China) | 副流感病毒 1 型 RNA: Synonyms: Ⅰ HPIV; |
88209-2 Parainfluenza virus 2 RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP14242-9 Parainfluenza virus 2
Human parainfluenza viruses (HPIVs) are a group of four distinct serotypes of single-stranded RNA viruses belonging to the paramyxovirus family. They are the second most common cause of lower respiratory tract infection in younger children. Repeated infection throughout the life of the host is not uncommon. Symptoms of later breakouts include upper respiratory tract illness as in a cold and sore throat. The incubation period of all four serotypes is 1 to 7 days. Parainfluenza viruses can be detected via cell culture, immunofluorescent microscopy, and PCR. Though no vaccines currently exist, research into vaccines for HPIV-1, -2, and -3 is underway. Parainfluenza viruses last only a few hours in the environment and are inactivated by soap and water.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Parainfluenza virus 2 (Wikipedia)
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Parainfluenza virus 2 RNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- HPIV2 RNA Corn/Cnjt Ql NAA+probe
- Display Name
- Parainfluenza virus 2 RNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Parainfluenza virus 2, Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Parainfluenza-Virus 2 RNA: Synonyms: Human rubulavirus 2 |
es-ES | Spanish (Spain) | Virus parainfluenza tipo 2 RNA: |
es-MX | Spanish (Mexico) | ARN del virus de la parainfluenza 2: |
fr-FR | French (France) | Parainfluenza virus 2 ARN: |
it-IT | Italian (Italy) | Parainfluenza virus 2 RNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus parainfluenzale Virus parainfluenzale di tipo 2 |
zh-CN | Chinese (China) | 副流感病毒 2 型 RNA: Synonyms: Ⅱ HPIV; |
88210-0 Parainfluenza virus 3 RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP14243-7 Parainfluenza virus 3
HPIV-3 peak activity occurs during the spring and early summer months each year, but the virus can be isolated througout the year. HPIVs are negative-sense, single-stranded RNA viruses that possess fusion and hemagglutinin-neuraminidase glycoprotein "spikes" on their surface. HPIVs are spread from respiratory secretions through close contact with infected persons or contact with contaminated surfaces or objects. HPIVs are ubiquitous and infect most people during childhood.
Source: Regenstrief Institute
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Parainfluenza virus 3 RNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- HPIV3 RNA Corn/Cnjt Ql NAA+probe
- Display Name
- Parainfluenza virus 3 RNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Parainfluenza virus 3, Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Parainfluenza-Virus 3 RNA: Synonyms: Human respirovirus 3 |
es-ES | Spanish (Spain) | Virus parainfluenza tipo 3 RNA: |
es-MX | Spanish (Mexico) | ARN del virus de la parainfluenza 3: |
fr-FR | French (France) | Parainfluenza virus 3 ARN: |
it-IT | Italian (Italy) | Parainfluenza virus 3 RNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus parainfluenzale Virus parainfluenzale di tipo 3 |
zh-CN | Chinese (China) | 副流感病毒 3 型 RNA: Synonyms: Ⅲ HPIV; |
88530-1 Parainfluenza virus 4 RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
LP35704-3 Parainfluenza virus 4
Human parainfluenza viruses (HPIVs) are common causes of respiratory tract disease in infants and young children. Each of the four HPIVs has different clinical and epidemiologic features. HPIV-4 is detected infrequently, and is less likely to cause severe disease; but it may be more common than once thought.
Source: Centers for Disease Control and Prevention, CDC
LP35704-3 Parainfluenza virus 4
Human parainfluenza viruses (HPIVs) have been recognized as a cause of respiratory tract infections for many decades. They belong to the Paramyxoviridae family, subfamily Paramyxovirinae, and are classified into 4 serotypes. Serotype 4 can be further subdivided into 2 antigenic subtypes, HPIV-4A and HPIV-4B.
Source: Centers for Disease Control and Prevention, CDC
Fully-Specified Name
- Component
- Parainfluenza virus 4 RNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- HPIV4 RNA Corn/Cnjt Ql NAA+probe
- Display Name
- Parainfluenza virus 4 RNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Parainfluenza virus 4, Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.64
- Last Updated
- Version 2.64
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Parainfluenza-Virus 4 RNA: Synonyms: Human rubulavirus 4 |
es-ES | Spanish (Spain) | Virus Parainfluenza 4 RNA: |
es-MX | Spanish (Mexico) | ARN del virus 4 de la parainfluenza: |
fr-FR | French (France) | Parainfluenza virus 4 ARN: |
it-IT | Italian (Italy) | Parainfluenza virus 4 RNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus parainfluenzale Virus parainfluenzale di tipo 4 |
zh-CN | Chinese (China) | 副流感病毒 4 型 RNA: Synonyms: HPIV; |
88529-3 Parainfluenza virus RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP18337-3 Parainfluenza virus
Parainfluenza virus is from the family Paramyxoviridae and the genera Paramyxovirus which includes the parainfluenza viruses and the mumps virus. Paramyxoviruses are particles up to 300 nm in diameter. They are spiral, tube-like symmetrical nucleocapsids which contain a monopartite, single-stranded, negative-sense RNA genome and an RNA-directed RNA polymerase. There is a matrix protein at the base of a double-layered lipid envelope which contains spikes with two glycoproteins, a viral attachment protein and a fusion protein. The viral protein spikes in parainfluenza viruses have hemagglutinating and neuraminidase activities. As all paramyxoviruses are labile, they are quickly inactivated (e.g., by heat, detergents, ultraviolet light). Primary infections occur in young children and cause mild or severe upper and lower respiratory tract infections. Reinfection is common and results in milder manifestation. Transmission is by direct contact or by droplets. Parainfluenza virus diseases are usually endemic although they can be epidemic. [NCBI Books:NBK8461]
Source: Regenstrief LOINC
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Parainfluenza virus RNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- HPIV RNA Corn/Cnjt Ql NAA+probe
- Display Name
- Parainfluenza virus RNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Parainfluenza virus, Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.64
- Last Updated
- Version 2.64
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Parainfluenza-Virus RNA: |
es-ES | Spanish (Spain) | Virus Parainfluenzae RNA: |
es-MX | Spanish (Mexico) | ARN del virus de la parainfluenza: |
fr-FR | French (France) | Parainfluenza virus ARN: |
it-IT | Italian (Italy) | Parainfluenza virus RNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus parainfluenzale |
zh-CN | Chinese (China) | 副流感病毒 RNA: Synonyms: HPIV; |
88204-3 Respiratory syncytial virus A RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
LP39552-2 Respiratory syncytial virus A RNA
Human respiratory syncytial virus (RSV), a negative-sense, single-stranded RNA virus of the family Paramyxoviridae, causes upper respiratory tract infections and bronchiolitis, an infection of the small airways that can cause wheezing and respiratory distress. Infants, especially those that were born prematurely, are particularly susceptible, and RSV bronchiolitis is a common cause of hospitalization for infants during the winter months. Certain groups of high-risk infants may be given palivizumab, a recombinant monoclonal antibody to RSV, as prophylaxis against RSV infection.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Respiratory syncytial virus A RNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- RSV A RNA Corn/Cnjt Ql NAA+probe
- Display Name
- RSV A RNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Respiratory syncytial virus (RSV) A, Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Respiratorisches Synzytial-Virus A RNA: |
es-ES | Spanish (Spain) | Virus respiratorio sincitial A RNA: |
es-MX | Spanish (Mexico) | Virus respiratorio sincitial A ARN: |
fr-FR | French (France) | Virus respiratoire syncytial A ARN: |
it-IT | Italian (Italy) | Virus respiratorio sinciziale A RNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA VRS |
zh-CN | Chinese (China) | 呼吸道合胞病毒 A 型 RNA: Synonyms: A 型 HRSV A RNA HRSV A 型 RNA HRSV A; |
88202-7 Respiratory syncytial virus B RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
LP39553-0 Respiratory syncytial virus B RNA
Human respiratory syncytial virus (RSV), a negative-sense, single-stranded RNA virus of the family Paramyxoviridae, causes upper respiratory tract infections and bronchiolitis, an infection of the small airways that can cause wheezing and respiratory distress. Infants, especially those that were born prematurely, are particularly susceptible, and RSV bronchiolitis is a common cause of hospitalization for infants during the winter months. Certain groups of high-risk infants may be given palivizumab, a recombinant monoclonal antibody to RSV, as prophylaxis against RSV infection.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Respiratory syncytial virus B RNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- RSV B RNA Corn/Cnjt Ql NAA+probe
- Display Name
- RSV B RNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Respiratory syncytial virus (RSV) B, Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Respiratorisches Synzytial-Virus B RNA: |
es-ES | Spanish (Spain) | Virus respiratorio sincitial B RNA: |
es-MX | Spanish (Mexico) | ARN del virus B sincitial respiratorio: |
fr-FR | French (France) | Virus respiratoire syncytial B ARN: |
it-IT | Italian (Italy) | Virus respiratorio sinciziale B RNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA VRS |
zh-CN | Chinese (China) | 呼吸道合胞病毒 B 型 RNA: Synonyms: B 型 HRSV B RNA HRSV B 型 RNA HRSV B; |
88528-5 Respiratory syncytial virus RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP14244-5 Respiratory syncytial virus
Human respiratory syncytial virus (RSV), a negative-sense, single-stranded RNA virus of the family Paramyxoviridae, causes upper respiratory tract infections and bronchiolitis, an infection of the small airways that can cause wheezing and respiratory distress. Infants, especially those that were born prematurely, are particularly susceptible, and RSV bronchiolitis is a common cause of hospitalization for infants during the winter months. Certain groups of high-risk infants may be given palivizumab, a recombinant monoclonal antibody to RSV, as prophylaxis against RSV infection.
Source: Regenstrief LOINC
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
LP39551-4 Respiratory syncytial virus RNA
The respiratory syncytial virus (RSV) is a member of the Paramyxoviridae family and is an enveloped pleomorphic virus. RSV is spread through contact with respiratory droplets, contact with the patient and contact with contaminated surfaces. The rate of transmission is affected by outside temperature, humidity and precipitation. RSV infection spreads faster when the temperature is low and the humidity is high in temperate zones and when rainfall levels are high in tropical climates. RSV causes severe lower respiratory infections in infants and young children. Infants born prematurely are particularly susceptible. Symptoms of RSV infection include cough, low-grade fever and rhinorrhea. High risk adult populations including patients in residential facilities, those with heart and lung diseases and immunocompromised patients are susceptible to severe RSV infection and significant morbidity.(Manual of Clinical Microbiology, 11th edition, James H. Jorgensen; Karen C. Carroll; Guido Funke; Michael A Pfaller; Marie Louise Landry; Sandra S. Richter; David W. Warnock)
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Respiratory syncytial virus RNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- RSV RNA Corn/Cnjt Ql NAA+probe
- Display Name
- RSV RNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Respiratory syncytial virus (RSV), Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.64
- Last Updated
- Version 2.64
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
de-DE | German (Germany) | Respiratorisches Synzytial-Virus RNA: |
es-ES | Spanish (Spain) | Virus respiratorio sincitial RNA: |
es-MX | Spanish (Mexico) | ARN del virus respiratorio sincitial: |
fr-FR | French (France) | Virus respiratoire syncytial ARN: |
it-IT | Italian (Italy) | Virus respiratorio sinciziale RNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA VRS |
zh-CN | Chinese (China) | 呼吸道合胞病毒 RNA: Synonyms: HRSV RNA HRSV; |
88213-4 Rhinovirus RNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP17714-4 Rhinovirus
Human rhinoviruses (HRVs) can be categorized into three genetically distinct HRV groups, designated groups A, B, and C, within the genus Enterovirus and the family Picornaviridae. HRVs are positive-sense, single-stranded-RNA (ssRNA) viruses of approximately 7,200 bp. HRVs, which are the cause of more than one-half of cold like illnesses, are commonly associated with upper respiratory tract infection, otitis media, and sinusitis. PCR testing for respiratory virus detection has led to the recognition of HRV as a lower respiratory tract pathogen as well, especially in patients with asthma, infants, elderly patients, and immunocompromised individuals. At this time there are no approved antiviral therapies, and treatment is primarily supportive.
Source: Regenstrief LOINC, PMCID: PMC3553670
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Rhinovirus RNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- Rhinovirus RNA Corn/Cnjt Ql NAA+probe
- Display Name
- Rhinovirus RNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Rhinovirus, Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
es-ES | Spanish (Spain) | Rinovirus RNA: |
es-MX | Spanish (Mexico) | ARN de rinovirus: |
fr-FR | French (France) | Rhinovirus ARN: |
it-IT | Italian (Italy) | Rhinovirus RNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
zh-CN | Chinese (China) | 鼻病毒 RNA: Synonyms: RHV RNA RHV; |
88132-6 Varicella zoster virus DNA [Presence] in Cornea or Conjunctiva by NAA with probe detection
Part Descriptions
LP14853-3 Varicella zoster virus
Varicella zoster virus (VZV) is a double-stranded alphaherpesvirus that causes seasonal outbreaks of chickenpox and shingles in non-immunized populations. VZV is highly infectious and is transmitted by contact with the ruptured fluid filled blisters and respiratory secretions of infected individuals. Immunity post infection is usually lifelong though the latent virus inhabits the sensory nerve ganglia where it can reactivate causing shingles when immunity declines with aging.[http://jvi.asm.org/content/88/24/13936.full] In the over fifty strains of VZV that have been sequenced it has been found that a single nucleotide polymorphism occurs about every 100 bases. The patterns of polymorphisms in VZV correlate with different geographical regions of infection and is the basis for the classification of viral clades.[https://grose.lab.uiowa.edu/vzv-genomes-and-evolution] Breuer proposed the nomenclature for the VZV clades as 1-5 with the suspected clades VI and VII to be confirmed later. The geographical regions associated with the seven clades are as follows:
Clades 1 and 3-represent the dominant clades of the circulating VZV in Europe and the Americas
Clades 4 and 5-found in Africa
Clade VI found in France, Italy
Clade VII exclusively isolated in the US
Clade 2-Asia from Korea, Japan, China not found in India, Nepal and Bangladesh where clades 4 and 5 were dominant
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5054591/
Source: Regenstrief LOINC
LP264599-4 Cornea/Conjunctiva
The "Cornea/Conjunctiva" System in LOINC encompasses both the cornea and conjunctiva, which are contiguous structures in front of the eye. This System is used for LOINC terms that represent tests run on either corneal or conjunctival specimens (e.g., swabs) and does not imply that both the corneal and conjunctiva were sampled in any given instance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Varicella zoster virus DNA
- Property
- PrThr
- Time
- Pt
- System
- Cornea/Conjunctiva
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- VZV DNA Corn/Cnjt Ql NAA+probe
- Display Name
- VZV DNA NAA+probe Ql (Corn/Cnjt)
- Consumer Name Alpha Get Info
- Varicella zoster virus (VZV; Chickenpox), Cornea or Conjunctiva
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.63
- Order vs. Observation
- Both
Example Answer List LL744-4
Answer | Code | Score | Answer ID |
---|---|---|---|
Detected | LA11882-0 | ||
Not detected | LA11883-8 |
Member of these Panels
LOINC | Long Common Name |
---|---|
88569-9 | Ocular pathogens panel - Cornea or Conjunctiva Qualitative by NAA with probe detection |
Member of these Groups Get Info
LOINC Group | Group Name |
---|---|
LG32750-8 | Varicella zoster virus |
LG50919-6 | Varicella zoster virus DNA| |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
es-ES | Spanish (Spain) | Virus Varicella zoster ADN: |
es-MX | Spanish (Mexico) | ADN del virus de la varicela zóster: |
fr-FR | French (France) | Varicelle zona virus ADN: |
it-IT | Italian (Italy) | Varicella zoster, virus DNA: Synonyms: Cornea o congiuntiva Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus della varicella zoster |
zh-CN | Chinese (China) | 水痘带状疱疹病毒 DNA: Synonyms: HHV-3 DNA HHV-3; |