Version 2.78

Term Description

This panel is used to report the results for molecular respiratory viral and bacterial pathogen testing in lower respiratory specimens. This panel was created for, but is not limited in use to, the submitter's test kit, Verigene Respiratory Pathogens Flex Nucleic Acid Test (RP Flex), a multiplexed qualitative test for the detection and identification of multiple viral and bacterial nucleic acids. Pathogens detected include Influenza A and B viruses, Parainfluenzavirus 1 through 4, Adenovirus B+C+E, Bocavirus 1+2+3, Human coronaviruses, Respiratory syncytial virus A and B, Rhinovirus, Enterovirus A+B+C, and Metapneumovirus, as well as Bordetella pertussis, parapertussis and holmesii.
Source: Regenstrief LOINC

Panel Hierarchy

Details for each LOINC in Panel LHC-Forms

LOINC Name R/O/C Cardinality Example UCUM Units
94393-6 Respiratory pathogens DNA and RNA panel - Lower respiratory specimen by NAA with probe detection
Indent94380-3 Acinetobacter baumannii DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent90340-1 Aspergillus sp DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent91840-9 Bordetella holmesii DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent92855-6 Bordetella parapertussis IS1001 DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94365-4 Bordetella pertussis DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent92857-2 Bordetella pertussis+bronchiseptica+holmesii IS481 DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94392-8 Bordetella pertussis+parapertussis+bronchiseptica gidA gene [Presence] in Lower respiratory specimen by NAA with probe detection
Indent91838-3 Bordetella sp DNA [Identifier] in Lower respiratory specimen by NAA with probe detection
Indent88547-5 Chlamydophila pneumoniae DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94379-5 Enterobacter cloacae complex DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94378-7 Escherichia coli DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent91837-5 Francisella sp DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent91085-1 Fungal 18s rRNA gene [Presence] in Lower respiratory specimen by NAA with probe detection
Indent91089-3 Fungal BT2 gene [Presence] in Lower respiratory specimen by NAA with probe detection
Indent91093-5 Fungal ITS region [Presence] in Lower respiratory specimen by NAA with probe detection
Indent91836-7 Giardia sp DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94377-9 Haemophilus influenzae DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94376-1 Klebsiella aerogenes DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94375-3 Klebsiella oxytoca DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94374-6 Klebsiella pneumoniae DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent88590-5 Legionella pneumophila DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94373-8 Moraxella catarrhalis DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent91829-2 Mycobacterium tuberculosis DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent91828-4 Mycoplasma genitalium DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent91827-6 Mycoplasma hominis DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent88579-8 Mycoplasma pneumoniae DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent88690-3 Pneumocystis jiroveci DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94372-0 Proteus sp DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94371-2 Pseudomonas aeruginosa DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94391-0 Respiratory viral pathogens DNA and RNA panel - Lower respiratory specimen by NAA with probe detection
IndentIndent90463-1 Adenovirus DNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88558-2 Cytomegalovirus DNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent91066-1 Enterovirus RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent91130-5 Hantavirus RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent89585-4 Herpes simplex virus 1 DNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent89587-0 Herpes simplex virus 2 DNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent89584-7 Herpes simplex virus DNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88593-9 Human bocavirus DNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88608-5 Human coronavirus 229E RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent92878-8 Human coronavirus 229E+HKU1+NL63+OC43 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88594-7 Human coronavirus HKU1 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88616-8 Human coronavirus NL63 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88605-1 Human coronavirus OC43 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88620-0 Human coronavirus RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent89651-4 Human metapneumovirus RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent94395-1 Influenza virus A H1 2009 pandemic RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent94396-9 Influenza virus A H1 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent94394-4 Influenza virus A H3 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent92977-8 Influenza virus A RNA [Presence] in Lower respiratory specimen by NAA with non-probe detection
IndentIndent88599-6 Influenza virus A RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88592-1 Influenza virus B RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent91132-1 Measles virus RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent91830-0 Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88563-2 Parainfluenza virus 1 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent92883-8 Parainfluenza virus 1+2+3+4 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88559-0 Parainfluenza virus 2 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88560-8 Parainfluenza virus 3 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88561-6 Parainfluenza virus 4 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88562-4 Parainfluenza virus RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent91825-0 Parechovirus RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88595-4 Respiratory syncytial virus A RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88597-0 Respiratory syncytial virus B RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent91133-9 Respiratory syncytial virus RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent91131-3 Rhinovirus RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent92885-3 Rhinovirus+Enterovirus RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent91823-5 Rubella virus RNA [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent96120-1 SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent96121-9 SARS-related coronavirus E gene [Presence] in Lower respiratory specimen by NAA with probe detection
IndentIndent88565-7 Varicella zoster virus DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent88550-9 Scedosporium apiospermum DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent88556-6 Scedosporium prolificans DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94370-4 Serratia marcescens DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94369-6 Staphylococcus aureus DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94368-8 Streptococcus agalactiae DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94367-0 Streptococcus pneumoniae DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Indent94366-2 Streptococcus pyogenes DNA [Presence] in Lower respiratory specimen by NAA with probe detection

Fully-Specified Name

Component
Respiratory pathogens DNA & RNA panel
Property
-
Time
Pt
System
Respiratory system specimen.lower
Scale
-
Method
Probe.amp.tar

Additional Names

Short Name
Resp path DNA+RNA Pnl Lower Resp NAA+prb
Display Name
Respiratory pathogens DNA and RNA panel NAA+probe (Lower resp)
Consumer Name Alpha Get Info
Respiratory Pathogens DNA and RNA Panel, Lower respiratory

Basic Attributes

Class
PANEL.MICRO
Type
Laboratory
First Released
Version 2.68
Last Updated
Version 2.77
Change Reason
Release 2.77: SYSTEM: Updated to standardize the representation of "Respiratory system specimen" in the System subhierarchy across LOINC;
Order vs. Observation
Order
Panel Type
Panel

Language Variants Get Info

Tag Language Translation
es-ES Spanish (Spain) Perfil espiratorio de virus y bacterias, ADN y ARN:Propiedades mixtas (sólo paneles):Punto temporal:Muestra de vías respiratorias inferiores:-:Sonda con amplificación dirigida
Synonyms: Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio
es-MX Spanish (Mexico) Panel de ADN y ARN de patógenos respiratorios:-:Punto temporal:Muestra de vías respiratorias inferiores:-:Amplificación de ácidos nucleicos con detección de sonda
fr-FR French (France) Pathogènes respiratoires ADN et ARN panel:-:Ponctuel:Voies respiratoires inférieures:-:PCR amplification de cible
it-IT Italian (Italy) Patogeni respiratori a DNA&RNA, panel:-:Pt:Campione da Sistema Respiratorio.inferiore:-:Sonda.amp.tar
Synonyms: Campione da Apparato Respiratorio Campione da apparato respiratorio inferiore Microbiologia Panel patogenie respiratoire DNA&RNA Punto nel tempo (episodio) Set di prescrizione microbiologia Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NL Dutch (Netherlands) respiratoire pathogenen DNA & RNA panel:-:moment:onderste luchtwegen:-:probe-detectie
Synonyms: onderste ademhalingsstelsel; systema respiratorium inferior probe.amp.tar systema respiratorium; ademhalingsstelsel

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=94393-6
Questionnaire definition
https://fhir.loinc.org/Questionnaire/?url=http://loinc.org/q/94393-6