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Part Description

LP173753-7   Middle East respiratory syndrome coronavirus
Middle East Respiratory Syndrome (MERS) is an illness caused by the virus Middle East Respiratory Syndrome Coronovirus (MERS-CoV). The illness was first reported in Saudi Arabia in 2012, but was later found to have originated in Jordan in 2012. MERS has been found in camels leading to speculation that they may be the initial reservoir for the virus. The largest outbreak of MERS that has occurred outside of the Arabian Peninsula was in the Republic of Korea in 2015 and was linked to an individual who had been traveling in the Arabian Peninsula. The virus is probably spread through respiratory secretions from infected individuals though the exact mode of transmission is under investigation. Infection with MERS begins with an incubation period of 5-6 days followed by a severe acute illness that involves fever, shortness of breath and for patients with comorbidities or reduced immunity can lead to pneumonia and kidney failure. The mortality rate of MERS is 3-4 out of 10 people who are infected, though most of the people who die have underlying conditions. In addition, some people experience only cold-like symptoms and others have no symptoms at all. In the United States, most state laboratories are approved to test for MERS-CoV using the real-time reverse transcription-PCR assay developed by the CDC. The assay can be run on respiratory, serum and stool specimens.[CDC: coronavirus/mers] Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name
Middle east respiratory syndrome coronavirus RNA:PrThr:Pt:Respiratory System Specimen:Ord:Probe.amp.tar
Long Common Name
Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Respiratory system specimen by NAA with probe detection
Short Name
MERS-CoV RNA Resp Ql NAA+probe
Display Name
MERS-CoV RNA NAA+probe Ql (Respiratory system specimen)
Consumer Name Alpha Get Info
Middle East respiratory syndrome coronavirus (MERS-CoV), Respiratory system specimen

Part Model Get Info

  • Component
    Middle East respiratory syndrome coronavirus RNA
    LP173752-9
    • Analyte
      Middle East respiratory syndrome coronavirus RNA
      LP173752-9
      • Component Numerator
        Middle East respiratory syndrome coronavirus RNA
        LP173752-9
        • Component Numerator Core
          Middle East respiratory syndrome coronavirus
          LP173753-7
        • Component Numerator Core Suffix
          RNA
          LP32423-3
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    PrThr
    LP217195-9
  • Time
    Pt
    LP6960-1
  • System
    Respiratory System Specimen
    LP436142-6
    • System Core
      Respiratory System Specimen
      LP436142-6
    • Super System
      NULL
       
  • Scale
    Ord
    LP7751-3
  • Method
    Probe.amp.tar
    LP6464-4

Example Answer List: LL360-9

Source: Regenstrief Institute
AnswerCodeScoreAnswer ID
PositiveCopyright http://snomed.info/sct ID:10828004 Positive (qualifier value)LA6576-8
NegativeCopyright http://snomed.info/sct ID:260385009 Negative (qualifier value)LA6577-6

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.68
Last Updated
Version 2.75 (MAJ)
Change Reason
Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
Order vs. Observation
Observation

Member of these Panels

LOINCLong Common Name
92143-7Respiratory pathogens DNA and RNA panel - Respiratory system specimen by NAA with probe detection
94499-1Respiratory viral pathogens DNA and RNA panel - Respiratory system specimen Qualitative by NAA with probe detection

Member of these Groups Get Info

LOINC GroupGroup Name
LG50060-9Middle East respiratory syndrome coronavirus RNA|PrThr|Sys:ANYResp

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Koronavirus způsobující blízkovýchodní respirační syndrom (MERS-CoV) RNA:Přítomnost nebo práh:Časový bod:Vzorek z dýchacích cest:Ordinální:Amplifikace nukleových kyselin s detekcí sondou
de-DEGerman (Germany)Middle East respiratory syndrome coronavirus (MERS CoV) RNA:Nachweis oder Schwellenwert:Zeitpunkt:Probenmaterial vom Respirationstrakt:Ordinal:Zielfragmentamplifikation mit Sondendetektion
el-GRGreek (Greece)Κορωνοϊός του αναπνευστικού συνδρόμου της Μέσης Ανατολής RNA:PrThr:Pt:Δείγμα αναπνευστικού συστήματος:Ord:Ανιχνευτής.ενίσχυση.στόχου
Synonyms: MICRO Ord PrThr Pt RNA Αναπνευστικό Αναπνευστικό σύστημα Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Δείγμα Δείγμα αναπνευστικού συστήματος Κορωνοϊός Κορωνοϊός του αναπνευστικού συνδρόμου της Μέσης Ανατολής
es-ESSpanish (Spain)Coronavirus del sindrome respiratorio de Oriente medio RNA:PrThr:Punto temporal:Muestra del sistema respiratorio:Ord:Sonda con amplificación dirigida
Synonyms: Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio
es-MXSpanish (Mexico)Síndrome respiratorio de Oriente Medio coronavirus ARN:Presencia o umbral:Punto temporal:Espécimen respiratorio:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-FRFrench (France)Coronavirus MERS ARN:Présence/Seuil:Ponctuel:Échantillon du système respiratoire:Qualitatif:PCR amplification de cible
it-ITItalian (Italy)Sindrome respiratoria mediorientale da Coronavirus (MERS) RNA:PrThr:Pt:Campione da Sistema Respiratorio:Ord:Sonda.amp.tar
Synonyms: Campione da Apparato Respiratorio Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NLDutch (Netherlands)Middle East Respiratory Syndrome-coronavirus RNA:aanwezigheid:moment:respiratoir monster:ordinaal:probe-detectie
Synonyms: MERS-coronavirus MERS-coronavirus; MERS-CoV probe.amp.tar systema respiratorium; ademhalingsstelsel
pl-PLPolish (Poland)Koronawirus bliskowschodniego zespołu oddechowego RNA:granica wykrywalności:punkt w czasie:próbka z układu oddechowego:uporządkowany:sonda.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Koronawirus Koronawirus bliskowschodniego zespołu oddechowego (MERS-CoV) RNA koronawirusa bliskowschodniego zespołu oddechowego (MERS-CoV)
zh-CNChinese (China)中东呼吸综合征冠状病毒 RNA:存在情况或阈值:时间点:呼吸系统标本:序数型:探针法.基因扩增.靶向
Synonyms: 中东呼吸道综合征冠状病毒;中东呼吸系统综合征冠状病毒;中東呼吸症候群冠狀病毒;MERS-CoV;MERSCoV;Middle east respiratory syndrome coronavirus;中东呼吸综合症冠状病毒 供检查用的材料;待检物;待试验物;样品;样本;试料;试样 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 受检物 呼吸道标本（样品、样本）;呼吸系统标本（样品、样本） 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 样品 样本 核糖核酸;Ribonucleic acid 经过扩增的 脱氧核糖核酸探针 试样

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=94501-4