94641-8

SARS-CoV-2 (COVID-19) S gene [Presence] in Specimen by NAA with probe detection

Active

Term Description

Qualitative detection of nucleic acids within the spike (S) gene of SARS coronavirus 2 (SARS-CoV-2) in various specimens, including lower & upper respiratory, serum, stool or urine, by nucleic acid amplification with probe-based detection.

Part Description

LP418046-1   SARS coronavirus 2 S gene
The Severe acute respiratory syndrome (SARS) coronavirus 2 (SARS-CoV-2), first known as 2019 Novel Coronavirus (2019-nCoV), was first identified as the cause of a respiratory illness outbreak, later defined as Coronavirus Disease 2019 (COVID-19), in Wuhan, China. The full genome of the SARS-CoV-2 that causes COVID-19 was first posted by Chinese health authorities in GenBank, the NIH genetic sequence database, and in the Global Initiative on Sharing All Influenza Data (GISAI) portal. This facilitated detection of the virus globally with subsequent sequences being nearly identical, suggesting a single, recent emergence from a virus related to bat coronaviruses and the SARS coronavirus. Real time Reverse Transcription-Polymerase Chain Reaction (rRT-PCR) tests targeting regions within genes, including RdRp, S, N, M, and E genes, specific to SARS-CoV-2 have been developed by the Centers for Disease Control and Prevention (CDC), the World Health Organization (WHO) and others for the diagnosis of COVID-19. Some assays only detect SARS-CoV-2 and other assays detect other strains (e.g. SARS-CoV) that are genetically similar.[CDC: coronavirus/2019-ncov]https://www.who.int/emergencies/diseases/novel-coronavirus-2019/technical-guidance/laboratory-guidance Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name

SARS coronavirus 2 S gene:PrThr:Pt:XXX:Ord:Probe.amp.tar

Long Common Name

SARS-CoV-2 (COVID-19) S gene [Presence] in Specimen by NAA with probe detection

Short Name

SARS-CoV-2 S gene Spec Ql NAA+probe

Display Name

SARS-CoV-2 (COVID-19) S gene NAA+probe Ql (Specimen)

Consumer Name Alpha Get Info

SARS-CoV-2 (COVID-19) S gene, Specimen

Part Model Get Info

• Component

  SARS coronavirus 2 S gene
  LP418046-1

  • Analyte

    SARS coronavirus 2 S gene
    LP418046-1

    • Component Numerator

      SARS coronavirus 2 S gene
      LP418046-1

      • Component Numerator Core

        SARS coronavirus 2 S gene
        LP418046-1

      • Component Numerator Core Suffix

        NULL
         

    • Component Denominator

      NULL
       

      • Component Denominator Core

        NULL
         

      • Component Denominator Core Suffix

        NULL
         

  • Challenge

    NULL
     

  • Adjustment

    NULL
     

  • Count

    NULL
     

• Property

  PrThr
  LP217195-9

• Time

  Pt
  LP6960-1

  • Time Core

    Pt
    LP6960-1

  • Time Modifier

    NULL
     

• System

  XXX
  LP7735-6

  • System Core

    XXX
    LP7735-6

  • Super System

    NULL
     

• Scale

  Ord
  LP7751-3

• Method

  Probe.amp.tar
  LP6464-4

Ask at Order Entry

Example Answer List: LL2021-5

Basic Attributes

Class

MICRO

Type

Laboratory

First Released

Version 2.68

Last Updated

Version 2.69 (MIN)

Order vs. Observation

Both

Member of these Panels

Member of these Groups Get Info

Language Variants Get Info

Related Names

• 2019 Novel Coronavirus
• 2019-nCoV
• 3 Self-Sustaining Sequence Replication
• 3SR SR
• Amplif
• Amplification
• Amplified
• Corona virus
• COVID19
• COVID-19
• DNA NUCLEIC ACID PROBE
• DNA probe
• ID
• II
• Infectious Disease
• InfectiousDisease
• LAT
• LCR
• Ligase chain reaction
• Ligation-activated transcription
• Microbiology
• Misc
• Miscellaneous
• NAA+probe
• NAAT
• NASBA
• Nucleic acid sequence based analysis
• Ordinal
• Other
• PCR
• Point in time
• Polymerase chain reaction
• PR
• Probe amp
• Probe with ampification
• Probe with target amplification
• QBR
• QL
• Qual
• Qualitative
• Random
• S prime
• SARS Coronavirus 1
• SARS-CoV
• SARS-CoV-1
• SARS-CoV-2
• SARS-CoV-2 S gene
• SARS-Related Coronavirus
• Screen
• SDA
• Severe Acute Respiratory Syndrome
• Spec
• Strand Displacement Amplification
• TMA
• To be specified in another part of the message
• Transcription mediated amplification
• Unspecified
• Viral Pneumonias
• Wuhan coronavirus

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Third Party Copyright

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LOINC Copyright

Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.