Version 2.76

Term Description

This panel is used for assays that are approved for the detection of both pan-Sarbecovirus (SARS-related coronavirus) and SARS-CoV-2 (COVID-19) in respiratory specimens. For assays that are approved for only SARS-CoV-2 and report multiple results, use the SARS-CoV-2 (COVID-19) RNA panel - Respiratory specimen by NAA with probe detection [LOINC: 94531-1].
Source: Regenstrief LOINC

Panel Hierarchy

Details for each LOINC in Panel LHC-Forms

LOINC Name R/O/C Cardinality Example UCUM Units
96094-8 SARS-CoV-2 (COVID-19) and SARS-related CoV RNA panel - Respiratory system specimen by NAA with probe detection
Indent96763-8 SARS-CoV-2 (COVID-19) E gene [Presence] in Respiratory system specimen by NAA with probe detection
Indent96764-6 SARS-CoV-2 (COVID-19) E gene [Cycle Threshold #] in Respiratory system specimen by NAA with probe detection {Ct_value}
Indent94757-2 SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory system specimen by Nucleic acid amplification using CDC primer-probe set N2
Indent94756-4 SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory system specimen by Nucleic acid amplification using CDC primer-probe set N1
Indent94533-7 SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory system specimen by NAA with probe detection
Indent95522-9 SARS-CoV-2 (COVID-19) N gene [Log #/volume] (viral load) in Respiratory system specimen by NAA with probe detection {Log_copies}/mL
Indent95521-1 SARS-CoV-2 (COVID-19) N gene [#/volume] (viral load) in Respiratory system specimen by NAA with probe detection {copies}/mL
Indent94559-2 SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Respiratory system specimen by NAA with probe detection
Indent94644-2 SARS-CoV-2 (COVID-19) ORF1ab region [Cycle Threshold #] in Respiratory system specimen by NAA with probe detection {Ct_value}
Indent94534-5 SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Respiratory system specimen by NAA with probe detection
Indent94646-7 SARS-CoV-2 (COVID-19) RdRp gene [Cycle Threshold #] in Respiratory system specimen by NAA with probe detection {Ct_value}
Indent94500-6 SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with probe detection
Indent94745-7 SARS-CoV-2 (COVID-19) RNA [Cycle Threshold #] in Respiratory system specimen by NAA with probe detection {Ct_value}
Indent94640-0 SARS-CoV-2 (COVID-19) S gene [Presence] in Respiratory system specimen by NAA with probe detection
Indent94642-6 SARS-CoV-2 (COVID-19) S gene [Cycle Threshold #] in Respiratory system specimen by NAA with probe detection {Ct_value}
Indent94758-0 SARS-related coronavirus E gene [Presence] in Respiratory system specimen by NAA with probe detection
Indent94502-2 SARS-related coronavirus RNA [Presence] in Respiratory system specimen by NAA with probe detection

Fully-Specified Name

Component
SARS coronavirus 2 & SARS-related coronavirus RNA panel
Property
-
Time
Pt
System
Respiratory System Specimen
Scale
-
Method
Probe.amp.tar

Additional Names

Short Name
SARS-CoV-2+SARSr-CoV pnl Resp NAA+probe
Display Name
SARS-CoV-2 (COVID-19) and SARS-related CoV RNA panel NAA+probe (Respiratory system specimen)
Consumer Name Alpha Get Info
SARS-CoV-2 (COVID-19) and SARS-related CoV RNA panel, Respiratory system specimen

Basic Attributes

Class
PANEL.MICRO
Type
Laboratory
First Released
Version 2.69
Last Updated
Version 2.75
Change Reason
Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
Order vs. Observation
Order
Panel Type
Panel

Member of these Groups Get Info

LOINC Group Group Name
LG51017-8 SARSCoV2 detection
LG51019-4 SARSCoV2 molecular detection

Language Variants Get Info

Tag Language Translation
de-DE German (Germany) SARS-Coronavirus 2 & SARS-bezogenes Coronavirus RNA (Liste):-:Zeitpunkt:Respirationstrakt:-:Zielfragmentamplifikation mit Sondendetektion
es-ES Spanish (Spain) Panel de ARN del SARS-CoV-2 (COVID-19) y de CoV relacionado con el SARS:Propiedades mixtas (sólo paneles):Punto temporal:Muestra del sistema respiratorio:-:Sonda con amplificación dirigida
Synonyms: Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio
es-MX Spanish (Mexico) Panel de ARN de CoV relacionado con el SARS-CoV-2 (COVID-19) y el SARS:-:Punto temporal:Espécimen respiratorio:-:Amplificación de ácidos nucleicos con detección de sonda
fr-FR French (France) Coronavirus SARS-CoV-2 et Coronavirus SARS apparentés ARN panel:-:Ponctuel:Spécimen du système respiratoire:-:PCR amplification de cible
it-IT Italian (Italy) SARS coronavirus 2 & coronavirus relativo a SARS, panel RNA:-:Pt:Campione da Sistema Respiratorio:-:Sonda.amp.tar
Synonyms: Campione da Apparato Respiratorio Coronavirus della SARS Microbiologia Panel RNA di SARS Cov-2 (COVID-19) e coronavirus relativo a SARS Punto nel tempo (episodio) SARS-CoV-2 (COVID-19) Set di prescrizione microbiologia Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NL Dutch (Netherlands) SARS-CoV-2 en SARS-gerelateerd CoV RNA panel:-:moment:ademhalingsstelsel:-:probe-detectie
Synonyms: probe.amp.tar SARS-virus severe acute respiratory syndrome coronavirus 2; 2019-nCoV; 2019 novel coronavirus; COVID-19 systema respiratorium; ademhalingsstelsel

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=96094-8
Questionnaire definition
https://fhir.loinc.org/Questionnaire/?url=http://loinc.org/q/96094-8