99019-2

Escherichia coli DNA [Presence] in Urine by NAA with probe detection

Active

Part Description

LP19605-2 Escherichia coli
Escherichia coli (EC) is a gram-negative, flagellated, rod-shaped bacterium. https://vetmed.iastate.edu/vdpam/FSVD/swine/index-diseases/colibacillosis The human gastrointestinal (GI) tract is colonized by EC within hours of birth. The natural barriers of the GI tract prevent infection by symbiotic EC except when they break down such as in peritonitis. EC occupy the mucous layer of the mammalian colon and is the most numerous anaerobe of the intestinal microflora. Some strains of EC have evolved virulence factors that precipitate serious disease including enteric diarrhea, urinary tract infections, sepsis and meningitis. The intestinal pathogens of EC include six pathotypes defined by the virulence factors they express. These include: enteropathogenic E. coli (EPEC), enterohaemorrhagic E. coli(EHEC), enterotoxigenic E. coli (ETEC), enteroaggregative E. coli (EAEC), enteroinvasive E. coli (EIEC) and diffusely adherent E. coli (DAEC). Uropathogenic EC (UPEC) is the most common EC infection that occurs outside the GI tract. The EC pathotypes that infects extraintestinal locations have been designated ExPEC. The EC pathotypes that infect animals and cause disease include EPEC, EHEC and ETEC.[nature.com/nrmicro/journal/v2/n2/full/nrmicro818.html][vetres.org/articles/vetres/pdf/2006/01/v6008.pdf] Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name: Escherichia coli DNA:PrThr:Pt:Urine:Ord:Probe.amp.tar
Long Common Name: Escherichia coli DNA [Presence] in Urine by NAA with probe detection
Short Name: E coli DNA Ur Ql NAA+probe
Display Name: E. coli DNA NAA+probe Ql (U)
Consumer Name Alpha Get Info: Escherichia coli, Urine

Part Model Get Info

Component
Escherichia coli DNA
LP102592-5
- Analyte
  Escherichia coli DNA
  LP102592-5
  - Component Numerator
    Escherichia coli DNA
    LP102592-5
    - Component Numerator Core
      Escherichia coli
      LP19605-2
    - Component Numerator Core Suffix
      DNA
      LP32416-7
  - Component Denominator
    NULL
    - Component Denominator Core
      NULL
    - Component Denominator Core Suffix
      NULL
- Challenge
  NULL
- Adjustment
  NULL
- Count
  NULL
Property
PrThr
LP217195-9
Time
Pt
LP6960-1
- Time Core
  Pt
  LP6960-1
- Time Modifier
  NULL
System
Urine
LP7681-2
- System Core
  Urine
  LP7681-2
- Super System
  NULL
Scale
Ord
LP7751-3
Method
Probe.amp.tar
LP6464-4

Example Answer List: LL2021-5

Source: Gen-Probe

Answer	Code	Score	Answer ID
PositiveCopyright http://snomed.info/sct ID:10828004 Positive (qualifier value)			LA6576-8
NegativeCopyright http://snomed.info/sct ID:260385009 Negative (qualifier value)			LA6577-6
InvalidCopyright http://snomed.info/sct ID:455371000124106 Invalid result (qualifier value)			LA15841-2

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.72
Last Updated: Version 2.72 (ADD)
Order vs. Observation: Observation

Member of these Panels

LOINC	Long Common Name
99012-7	Urinary tract pathogens panel - Urine by NAA with probe detection

Language Variants Get Info

Tag	Language	Translation
cs-CZ	Czech (Czechia)	Escherichia coli DNA:Přítomnost nebo práh:Časový bod:Moč:Ordinální:Amplifikace nukleových kyselin s detekcí sondou
de-DE	German (Germany)	Escherichia coli DNA:Nachweis oder Schwellenwert:Zeitpunkt:Urin:Ordinal:Zielfragmentamplifikation mit Sondendetektion
el-GR	Greek (Greece)	Escherichia coli (Κολοβακτηρίδιο) DNA:PrThr:Pt:Ούρα:Ord:Ανιχνευτής.ενίσχυση.στόχου Synonyms: DNA Escherichia coli (Κολοβακτηρίδιο) MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Ούρα
es-ES	Spanish (Spain)	Escherichia coli ADN:PrThr:Punto temporal:Orina:Ord:Sonda con amplificación dirigida
fr-CA	French (Canada)	Escherichia coli, ADN:Présence-Seuil:Temps ponctuel:Urine:Ordinal:Sonde avec amplification de la cible
fr-BE	French (Belgium)	Escherichia coli ADN:PrThr:Temps ponctuel:Urine:Ordinal:Sonde avec amplification de la cible
fr-FR	French (France)	Escherichia coli ADN:Présence/Seuil:Ponctuel:Urine:Qualitatif:PCR amplification de cible
it-IT	Italian (Italy)	Escherichia coli DNA:PrThr:Pt:Urine:Ord:Sonda.amp.tar Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NL	Dutch (Netherlands)	Escherichia coli DNA:aanwezigheid:moment:urine:ordinaal:probe-detectie Synonyms: E. coli probe.amp.tar
pl-PL	Polish (Poland)	Escherichia coli DNA:granica wykrywalności:punkt w czasie:mocz:uporządkowany:sonda.amplifikacja.cel Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Kwas deoksyrybonukleinowy
ru-RU	Russian (Russian Federation)	Escherichia coli ДНК:PrThr:ТчкВрм:Моча:Пор:Проба.усил.миш Synonyms: ДНК проба;ДНК зонд Порядковый Проба с мишени усилением Точка во времени;Момент
tr-TR	Turkish (Turkey)	Escherichia coli DNA:MevcEşik:Zmlı:İdrar:Srl:Prob.amf.hdf Synonyms: Mevcut
zh-CN	Chinese (China)	大肠埃希菌 DNA:存在情况或阈值:时间点:尿液:序数型:探针法.基因扩增.靶向 Synonyms: E coli;大肠埃希氏杆菌;大肠埃希氏菌;大肠杆菌依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向去氧核糖核酸;脱氧核糖核酸去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA）存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）尿;小便;下泉微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间经过扩增的脱氧核糖核酸探针

LOINC Terminology Service (API) using HL7^® FHIR^® Get Info

CodeSystem lookup: https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=99019-2

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LOINC Copyright

Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.