Version 2.78

Part Description

LP150045-5   Sequencing
Sequencing is a method used to determine the sequence of individual genes, larger genetic regions (i.e. clusters of genes or operons), full chromosomes or entire genomes. Historically, most sequencing has been performed using the chain termination method developed by Frederick Sanger in 1977. PMID: 271968 Sequencing technologies have improved dramatically, making them cheaper, faster, and more accurate. Next-generation sequencing (NGS), also known as high-throughput sequencing, deep sequencing, and second-generation sequencing, is a type of technology that uses parallel sequencing of multiple small fragments of DNA to determine sequence. This "high-throughput" technology has increased the speed and amount of DNA sequenced at a significantly reduced cost. PMID: 18576944 Several NGS platforms (ie, sequencing instruments and associated reagents) have been developed. Third-generation sequencing is another methodology currently under development that uses parallel sequencing similar to NGS. In contrast to NGS, third-generation sequencing uses single DNA molecules rather than amplified DNA as a template. PMID: 20858600 Source: Regenstrief LOINC

Fully-Specified Name

Component
Monkeypox virus clade
Property
Type
Time
Pt
System
XXX
Scale
Nom
Method
Sequencing

Additional Names

Short Name
MVPX clade Spec Seq
Display Name
Monkeypox virus clade Sequencing Nom (Specimen)
Consumer Name Alpha Get Info
Monkeypox virus clade, Specimen

Example Answer List: LL6290-2

Answer Code Score Answer ID
Clade I LA33581-2
Clade IIa LA33582-0
Clade IIb LA33583-8
InvalidCopyright http://snomed.info/sct ID:455371000124106 Invalid result (qualifier value) LA15841-2
Unsatisfactory LA20552-8

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.74
Last Updated
Version 2.75
Order vs. Observation
Both

Member of these Panels

LOINC Long Common Name
101002-4 Monkeypox virus sequencing panel - Specimen by Sequencing

Language Variants Get Info

Tag Language Translation
de-DE German (Germany) Affenpocken-Virus-Klade:Typ:Zeitpunkt:XXX:Nominal:Sequenzierung
es-ES Spanish (Spain) Clado del virus de la viruela del mono:Tipo:Punto temporal:XXX:Nom:Secuenciación
fr-FR French (France) Monkeypox virus clade:Type:Ponctuel:Milieux divers:Résultat nominal:Séquençage
it-IT Italian (Italy) Monkeypox virus clade:Tipo:Pt:XXX:Nom:Sequenziamento
Synonyms: Microbiologia Punto nel tempo (episodio)
nl-NL Dutch (Netherlands) 'mpox'-virus clade:type:moment:XXX:nominaal:sequencing
Synonyms: apenpokkenvirus; MPV; monkeypoxvirus apenpokkenvirus; MPVX; ''monkeypox''-virus
zh-CN Chinese (China) 猴痘病毒进化枝:类型:时间点:XXX:名义型:序列测定
Synonyms: mpox 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体 分类型应答;分类型结果;名义性;名称型;名词型;名词性;标称性;没有自然次序的名义型或分类型应答 型 序列分析;测序 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 时刻;随机;随意;瞬间 猴痘病毒进化枝（分支、支、支系、分枝、分化体、种系分枝、演化支）

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=101003-2