101289-7

SARS-CoV-2 (COVID-19) RNA [Presence] in Throat by NAA with non-probe detection

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Part Description

LP417540-4 SARS coronavirus 2
The 2019 Novel Coronavirus (2019-nCoV) is a coronavirus first identified as the cause of a respiratory illness outbreak in Wuhan, China. Initially, the outbreak was linked to a large seafood and animal market and thought to only be spread by animal to person contact. Within a short time, a growing number of patients who had not been exposed to animal markets were diagnosed with the infection, indicating person-to-person transmission. As of January 2020, infections with 2019-nCoV had been reported internationally due to confirmed cases in travelers from Wuhan. Overall, clinical symptoms appear milder than SARS Coronavirus (SARS-CoV) and Middle East Respiratory Syndrome (MERS) Coronavirus (MERS-CoV) infections as do the fatality rate and transmissibility. PMID: 31953166 Reported illnesses range from minor or no respiratory symptoms to severe acute respiratory illness and death.

The full genome of the 2019-nCoV was first posted by Chinese health authorities in GenBank, the NIH genetic sequence database, and in the Global Initiative on Sharing All Influenza Data (GISAI) portal. This facilitated detection of the virus globally with subsequent sequences being nearly identical, suggesting a single, recent emergence from a virus related to bat coronaviruses and the SARS coronavirus. Source: LOINC

Fully-Specified Name

Component: SARS coronavirus 2 RNA
Property: PrThr
Time: Pt
System: Thrt
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: SARS-CoV-2 RNA Throat Ql NAA+non-probe
Display Name: SARS-CoV-2 (COVID-19) RNA NAA+non-probe Ql (Throat)
Consumer Name Alpha Get Info: SARS-CoV-2 (COVID-19), Throat

Example Answer List: LL360-9

Source: Regenstrief Institute

Answer	Code	Score	Answer ID
PositiveCopyright http://snomed.info/sct ID:10828004 Positive (qualifier value)			LA6576-8
NegativeCopyright http://snomed.info/sct ID:260385009 Negative (qualifier value)			LA6577-6

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.74
Last Updated: Version 2.75
Order vs. Observation: Both

Member of these Panels

LOINC	Long Common Name
101285-5	Pharyngeal pathogens DNA and RNA panel - Throat by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG50983-2	SARS coronavirus 2 RNA\|PrThr\|Sys:ANYResp
LG51017-8	SARSCoV2 detection
LG51019-4	SARSCoV2 molecular detection

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	SARS-Coronavirus 2 RNA:Nachweis oder Schwellenwert:Zeitpunkt:Rachen:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Panel del SARS-CoV-2 (COVID-19) RNA:PrThr:Punto temporal:Faringe:Ord:Amplificación del objetivo no basado en sonda
fr-FR	French (France)	Coronavirus SARS-CoV-2 ARN:Présence/Seuil:Ponctuel:Gorge:Qualitatif:Non-PCR amplification de cible
fr-CA	French (Canada)	coronavirus 2 du SRAS , ARN:Présence-Seuil:Temps ponctuel:Gorge:Ordinal:Non-sonde.amplification de cible
it-IT	Italian (Italy)	SARS coronavirus 2 RNA:PrThr:Pt:Gola:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Coronavirus della SARS Gola Microbiologia Presenza o Soglia Punto nel tempo (episodio) SARS-CoV-2 (COVID-19) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
zh-CN	Chinese (China)	SARS 冠状病毒 2 RNA:存在情况或阈值:时间点:咽喉:序数型:非探针法.基因扩增.靶向 Synonyms: 2019 新型冠状病毒;2019 年新型冠状病毒;2019-nCoV;SARS-CoV-2;新型冠状病毒肺炎;新冠肺炎;Coronavirus disease 2019;COVID-19;冠状病毒疾病2019;严重急性呼吸综合征;severe acute respiratory syndrome;SARS;传染性非典型肺炎;infectious atypical pneumonia;非典 Ⅱ II SARS;SARS 病毒;SARS-CoV;严重急性呼吸综合征;严重急性呼吸综合征病毒;萨斯病毒;非典;非典型肺炎;非典型肺炎病毒;非典病毒上呼吸道;咽喉部依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 经过扩增的脱氧核糖核酸探针

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CodeSystem lookup: https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=101289-7

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LOINC Copyright

Copyright © 2024 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © 1995-2024, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.