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Status Information

Status
DEPRECATED
Map-ToLong Common NameMapping Guidance
94531-1SARS-CoV-2 (COVID-19) RNA panel - Respiratory system specimen by NAA with probe detection

Term Description

Qualitative and Quantitative assay for SARS-CoV-2 RNA using PCR method

Part Description

LP417540-4   SARS coronavirus 2
The 2019 Novel Coronavirus (2019-nCoV) is a coronavirus first identified as the cause of a respiratory illness outbreak in Wuhan, China. Initially, the outbreak was linked to a large seafood and animal market and thought to only be spread by animal to person contact. Within a short time, a growing number of patients who had not been exposed to animal markets were diagnosed with the infection, indicating person-to-person transmission. As of January 2020, infections with 2019-nCoV had been reported internationally due to confirmed cases in travelers from Wuhan. Overall, clinical symptoms appear milder than SARS Coronavirus (SARS-CoV) and Middle East Respiratory Syndrome (MERS) Coronavirus (MERS-CoV) infections as do the fatality rate and transmissibility. PMID: 31953166 Reported illnesses range from minor or no respiratory symptoms to severe acute respiratory illness and death.

The full genome of the 2019-nCoV was first posted by Chinese health authorities in GenBank, the NIH genetic sequence database, and in the Global Initiative on Sharing All Influenza Data (GISAI) portal. This facilitated detection of the virus globally with subsequent sequences being nearly identical, suggesting a single, recent emergence from a virus related to bat coronaviruses and the SARS coronavirus. Source: LOINC

Panel Hierarchy

Details for each LOINC in Panel LHC-Forms

LOINCNameR/O/CCardinalityExample UCUM Units
101721-9Deprecated SARS-CoV-2 (COVID-19) in Respiratory specimen by NAA with probe detection
Indent94500-6SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with probe detection
Indent97104-4SARS-CoV-2 (COVID-19) ORF1ab region [Units/volume] (viral load) in Upper respiratory specimen by NAA with probe detection[IU]/mL
Indent31208-2Specimen source identifiedO
Indent72826-1Race OMB.1997
Indent69490-1Ethnicity OMB.1997

LOINC Names Get Info

Fully-Specified Name
SARS coronavirus 2 RNA:-:Pt:Respiratory:-:Probe.amp.tar
Long Common Name
Deprecated SARS-CoV-2 (COVID-19) in Respiratory specimen by NAA with probe detection
Short Name
Deprecated SARS-CoV-2 Resp NAA+probe
Display Name
SARS-CoV-2 (COVID-19) NAA+probe (Resp)
Consumer Name Alpha Get Info
SARS-CoV-2 (COVID-19), Respiratory

Part Model Get Info

  • Component
    SARS coronavirus 2 RNA
    LP417541-2
    • Analyte
      SARS coronavirus 2 RNA
      LP417541-2
      • Component Numerator
        SARS coronavirus 2 RNA
        LP417541-2
        • Component Numerator Core
          SARS coronavirus 2
          LP417540-4
        • Component Numerator Core Suffix
          RNA
          LP32423-3
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    -
    LP6769-6
  • Time
    Pt
    LP6960-1
  • System
    Respiratory
    LP208442-6
    • System Core
      Respiratory
      LP208442-6
    • Super System
      NULL
       
  • Scale
    -
    LP7747-1
  • Method
    Probe.amp.tar
    LP6464-4

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.75
Last Updated
Version 2.76 (DEL)
Order vs. Observation
Order
Panel Type
Panel

Member of these Groups Get Info

LOINC GroupGroup Name
LG51017-8SARSCoV2 detection
LG51019-4SARSCoV2 molecular detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)SARS-CoV-2 (COVID-19) RNA:-:Časový bod:Vzorek z dýchacích cest:-:Amplifikace nukleových kyselin s detekcí sondou
el-GRGreek (Greece)Κορωνοϊός SARS 2 RNA:-:Pt:Αναπνευστικό:-:Ανιχνευτής.ενίσχυση.στόχου
Synonyms: - MICRO Pt RNA Αναπνευστικό Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Κορωνοϊός Κορωνοϊός SARS Κορωνοϊός SARS 2
es-ESSpanish (Spain)Panel del SARS-CoV-2 (COVID-19) RNA:Propiedades mixtas (sólo paneles):Punto temporal:Respiratorio:-:Sonda con amplificación dirigida
Synonyms: Muestra respiratoria
fr-CAFrench (Canada)coronavirus 2 du SRAS ARN:-:Temps ponctuel:Respiratoire:-:Sonde avec amplification de la cible
fr-FRFrench (France)Coronavirus SARS-CoV-2 ARN:-:Ponctuel:Respiratoire:-:PCR amplification de cible
it-ITItalian (Italy)SARS coronavirus 2 RNA:-:Pt:Respiratorio:-:Sonda.amp.tar
Synonyms: Coronavirus della SARS Microbiologia Punto nel tempo (episodio) SARS-CoV-2 (COVID-19) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NLDutch (Netherlands)SARS-CoV-2 RNA:-:moment:luchtwegen:-:probe-detectie
Synonyms: probe.amp.tar SARS-virus severe acute respiratory syndrome coronavirus 2; 2019-nCoV; 2019 novel coronavirus; COVID-19 systema respiratorium; ademhalingsstelsel
pl-PLPolish (Poland)SARS-CoV-2 RNA:-:punkt w czasie:próbka z dróg oddechowych:-:sonda.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Koronawirus
zh-CNChinese (China)SARS 冠状病毒 2 RNA:-:时间点:呼吸道:-:探针法.基因扩增.靶向
Synonyms: 2019 新型冠状病毒;2019 年新型冠状病毒;2019-nCoV;SARS-CoV-2;新型冠状病毒肺炎;新冠肺炎;Coronavirus disease 2019;COVID-19;冠状病毒疾病2019;严重急性呼吸综合征;severe acute respiratory syndrome;SARS;传染性非典型肺炎;infectious atypical pneumonia;非典 Ⅱ II SARS;SARS 病毒;SARS-CoV;严重急性呼吸综合征;严重急性呼吸综合征病毒;萨斯病毒;非典;非典型肺炎;非典型肺炎病毒;非典病毒 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 呼吸道标本（样品、样本）;呼吸系统标本（样品、样本） 多重;多重型;多重标尺类型;多重精度类型 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 核糖核酸;Ribonucleic acid 经过扩增的 脱氧核糖核酸探针

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=101721-9