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Part Description

LP417540-4   SARS coronavirus 2
The 2019 Novel Coronavirus (2019-nCoV) is a coronavirus first identified as the cause of a respiratory illness outbreak in Wuhan, China. Initially, the outbreak was linked to a large seafood and animal market and thought to only be spread by animal to person contact. Within a short time, a growing number of patients who had not been exposed to animal markets were diagnosed with the infection, indicating person-to-person transmission. As of January 2020, infections with 2019-nCoV had been reported internationally due to confirmed cases in travelers from Wuhan. Overall, clinical symptoms appear milder than SARS Coronavirus (SARS-CoV) and Middle East Respiratory Syndrome (MERS) Coronavirus (MERS-CoV) infections as do the fatality rate and transmissibility. PMID: 31953166 Reported illnesses range from minor or no respiratory symptoms to severe acute respiratory illness and death.

The full genome of the 2019-nCoV was first posted by Chinese health authorities in GenBank, the NIH genetic sequence database, and in the Global Initiative on Sharing All Influenza Data (GISAI) portal. This facilitated detection of the virus globally with subsequent sequences being nearly identical, suggesting a single, recent emergence from a virus related to bat coronaviruses and the SARS coronavirus. Source: LOINC

LOINC Names Get Info

Fully-Specified Name
SARS coronavirus 2 RNA:PrThr:Pt:Tracheal aspirate:Ord:Probe.amp.tar
Long Common Name
SARS-CoV-2 (COVID-19) RNA [Presence] in Tracheal aspirate by NAA with probe detection
Short Name
SARS-CoV-2 RNA Tracheal asp Ql NAA+probe
Display Name
SARS-CoV-2 (COVID-19) RNA NAA+probe Ql (Tracheal aspirate)
Consumer Name Alpha Get Info
SARS-CoV-2 (COVID-19), Tracheal aspirate

Part Model Get Info

  • Component
    SARS coronavirus 2 RNA
    LP417541-2
    • Analyte
      SARS coronavirus 2 RNA
      LP417541-2
      • Component Numerator
        SARS coronavirus 2 RNA
        LP417541-2
        • Component Numerator Core
          SARS coronavirus 2
          LP417540-4
        • Component Numerator Core Suffix
          RNA
          LP32423-3
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    PrThr
    LP217195-9
  • Time
    Pt
    LP6960-1
  • System
    Tracheal aspirate
    LP442765-6
    • System Core
      Tracheal aspirate
      LP442765-6
    • Super System
      NULL
       
  • Scale
    Ord
    LP7751-3
  • Method
    Probe.amp.tar
    LP6464-4

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.78
Last Updated
Version 2.78 (ADD)
Order vs. Observation
Observation

Member of these Groups Get Info

LOINC GroupGroup Name
LG51017-8SARSCoV2 detection
LG51019-4SARSCoV2 molecular detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)SARS-CoV-2 (COVID-19) RNA:Přítomnost nebo práh:Časový bod:Tracheální aspirát:Ordinální:Amplifikace nukleových kyselin s detekcí sondou
el-GRGreek (Greece)Κορωνοϊός SARS 2 RNA:PrThr:Pt:Υλικό τραχειακής αναρρόφησης:Ord:Ανιχνευτής.ενίσχυση.στόχου
Synonyms: MICRO Ord PrThr Pt RNA Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Κορωνοϊός Κορωνοϊός SARS Κορωνοϊός SARS 2 Υλικό τραχειακής αναρρόφησης
es-ESSpanish (Spain)Panel del SARS-CoV-2 (COVID-19) RNA:PrThr:Punto temporal:Aspirado traqueal:Ord:Sonda con amplificación dirigida
fr-FRFrench (France)Coronavirus SARS-CoV-2 ARN:Présence/Seuil:Ponctuel:Aspiration trachéale:Qualitatif:PCR amplification de cible
it-ITItalian (Italy)SARS coronavirus 2 RNA:PrThr:Pt:Aspirato tracheale:Ord:Sonda.amp.tar
Synonyms: Coronavirus della SARS Microbiologia Presenza o Soglia Punto nel tempo (episodio) SARS-CoV-2 (COVID-19) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NLDutch (Netherlands)SARS-CoV-2 RNA:aanwezigheid:moment:aspiraat uit trachea:ordinaal:probe-detectie
Synonyms: monster uit luchtpijp verkregen door aspiratie probe.amp.tar SARS-virus severe acute respiratory syndrome coronavirus 2; 2019-nCoV; 2019 novel coronavirus; COVID-19
zh-CNChinese (China)SARS 冠状病毒 2 RNA:存在情况或阈值:时间点:气管吸出物:序数型:探针法.基因扩增.靶向
Synonyms: 2019 新型冠状病毒;2019 年新型冠状病毒;2019-nCoV;SARS-CoV-2;新型冠状病毒肺炎;新冠肺炎;Coronavirus disease 2019;COVID-19;冠状病毒疾病2019;严重急性呼吸综合征;severe acute respiratory syndrome;SARS;传染性非典型肺炎;infectious atypical pneumonia;非典 Ⅱ II SARS;SARS 病毒;SARS-CoV;严重急性呼吸综合征;严重急性呼吸综合征病毒;萨斯病毒;非典;非典型肺炎;非典型肺炎病毒;非典病毒 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 核糖核酸;Ribonucleic acid 气管吸出物（抽出物、抽吸物） 经过扩增的 脱氧核糖核酸探针

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=105748-8