Version 2.78

Part Descriptions

LP133422-8   Streptococcus pyogenes M protein (emm) gene
The emm gene, defined here as the Streptococcus pyogenes gene amplified with primers 1 and 2, encodes the cell surface M virulence protein putatively responsible for at least 100 known M serospecificities of S. pyogenes. Source: Centers for Disease Control and Prevention, CDC

LP150045-5   Sequencing
Sequencing is a method used to determine the sequence of individual genes, larger genetic regions (i.e. clusters of genes or operons), full chromosomes or entire genomes. Historically, most sequencing has been performed using the chain termination method developed by Frederick Sanger in 1977. PMID: 271968 Sequencing technologies have improved dramatically, making them cheaper, faster, and more accurate. Next-generation sequencing (NGS), also known as high-throughput sequencing, deep sequencing, and second-generation sequencing, is a type of technology that uses parallel sequencing of multiple small fragments of DNA to determine sequence. This "high-throughput" technology has increased the speed and amount of DNA sequenced at a significantly reduced cost. PMID: 18576944 Several NGS platforms (ie, sequencing instruments and associated reagents) have been developed. Third-generation sequencing is another methodology currently under development that uses parallel sequencing similar to NGS. In contrast to NGS, third-generation sequencing uses single DNA molecules rather than amplified DNA as a template. PMID: 20858600 Source: Regenstrief LOINC

Fully-Specified Name

Component
Streptococcus pyogenes M protein (emm) gene
Property
Type
Time
Pt
System
Isolate
Scale
Nom
Method
Sequencing

Additional Names

Short Name
St pyo emm gene Islt Seq
Display Name
S. pyogenes M protein emm gene Sequencing Nom (Isol)
Consumer Name Alpha Get Info
Streptococcus pyogenes M protein (emm) gene

Example Answer List: LL1734-4

Source: Hong Kong Hospital Authority
Answer Code Score Answer ID
12 LA14558-3
14 LA14560-9

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.38
Last Updated
Version 2.65
Change Reason
Changed method from Amplification/Sequencing because Amplification always occurs before sequencing
Order vs. Observation
Both

Member of these Groups Get Info

LOINC Group Group Name
LG41610-3 Streptococcus pyogenes

Language Variants Get Info

Tag Language Translation
de-DE German (Germany) Streptococcus pyogenes M-Protein (emm)-Gen:Typ:Zeitpunkt:Isolat:Nominal:Sequenzierung
es-ES Spanish (Spain) Gen de la proteina M de Streptococcus pyogenes (emm):Tipo:Punto temporal:Aislado:Nom:Secuenciación
es-MX Spanish (Mexico) Gen de la proteína M de Streptococo pyogenes (emm):Tipo:Punto temporal:Aislado:Nominal:Secuenciación
fr-FR French (France) Streptococcus pyogenes protéine M EMM gène:Type:Ponctuel:Isolat:Résultat nominal:Séquençage
it-IT Italian (Italy) Streptococcus pyogenes, gene (emm) proteina M:Tipo:Pt:Isolato:Nom:Sequenziamento
Synonyms: Gene (emm) proteina M di Streptococcus pyogenes Microbiologia Punto nel tempo (episodio)
nl-NL Dutch (Netherlands) Streptococcus pyogenes M eiwit (emm) gen:type:moment:isolaat:nominaal:sequencing
tr-TR Turkish (Turkey) Streptococcus pyogenes M protein (emm) geni:Tip:Zmlı:İzolat:Snf:Sekanslama
Synonyms: Dizi tayini Tür
zh-CN Chinese (China) 化脓性链球菌 M 蛋白 (emm) 基因:类型:时间点:分离株:名义型:序列测定
Synonyms: A 族链球菌 M 蛋白 (emm) 基因;A 组链球菌 M 蛋白 (emm) 基因;A 群链球菌 M 蛋白 (emm) 基因;产脓链球菌 M 蛋白 (emm) 基因;酿脓链球菌 M 蛋白 (emm) 基因;化脓性链球菌 M 蛋白基因 A 族链球菌;A 组链球菌;Group A Streptococcus;GAS;A 群链球菌;GAS;产脓链球菌;酿脓链球菌 M 型 PR;Prot;成分 - 化学 - 蛋白质类;蛋白;朊;蛋白质类;蛋白质类物质 分离物;分离菌;分离菌株;隔离种群 分类型应答;分类型结果;名义性;名称型;名词型;名词性;标称性;没有自然次序的名义型或分类型应答 型 序列分析;测序 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 时刻;随机;随意;瞬间 遗传基因;遗传因子;吉恩;生物基因

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=67569-4