70867-7
Rabies virus strain identified in Specimen by Sequencing
Active
Term Description
There is some regional variance of Rabies virus strains. These can be identified by amplification and sequencing for epidemiologic purposes, for example identifying a foreign strain that has been introduced to the US.
Part Description
LP150045-5 Sequencing
Sequencing is a method used to determine the sequence of individual genes, larger genetic regions (i.e. clusters of genes or operons), full chromosomes or entire genomes. Historically, most sequencing has been performed using the chain termination method developed by Frederick Sanger in 1977. PMID: 271968 Sequencing technologies have improved dramatically, making them cheaper, faster, and more accurate. Next-generation sequencing (NGS), also known as high-throughput sequencing, deep sequencing, and second-generation sequencing, is a type of technology that uses parallel sequencing of multiple small fragments of DNA to determine sequence. This "high-throughput" technology has increased the speed and amount of DNA sequenced at a significantly reduced cost. PMID: 18576944 Several NGS platforms (ie, sequencing instruments and associated reagents) have been developed. Third-generation sequencing is another methodology currently under development that uses parallel sequencing similar to NGS. In contrast to NGS, third-generation sequencing uses single DNA molecules rather than amplified DNA as a template. PMID: 20858600
Source: Regenstrief LOINC
LOINC Names Get Info
- Fully-Specified Name
- Rabies virus strain:
Prid: Pt: XXX: Nom: Sequencing - Long Common Name
- Rabies virus strain identified in Specimen by Sequencing
- Short Name
- RABV strain Spec Seq
- Display Name
- Rabies virus strain identified Sequencing Nom (Specimen)
- Consumer Name Alpha Get Info
- Rabies virus strain test, Specimen
Part Model Get Info
Example Answer List: LL2067-8
Source: Centers for Disease Control and Prevention| Answer | Code | Score | Answer ID |
|---|---|---|---|
| California Skunk Rabies Virus variant | LA18506-8 | ||
| North Central Skunk Rabies Virus variant | LA18507-6 | ||
| South Central Skunk Rabies Virus variant | LA18508-4 | ||
| Arizona Gray Fox Rabies Virus variant | LA18509-2 | ||
| Texas Gray Fox Rabies Virus variant | LA18510-0 | ||
| Arctic Fox Rabies Virus variant | LA18511-8 | ||
| Raccoon Rabies Virus variant | LA18512-6 | ||
| Mongoose Rabies Virus variant | LA18513-4 | ||
| Canine Rabies Virus variant | LA18514-2 | ||
| Bat (not specified) Rabies Virus variant | LA18515-9 | ||
| Eptesicus fuscus Rabies Virus variant | LA18516-7 | ||
| Lasionycteris noctivagans Rabies Virus variant | LA18517-5 | ||
| Tadarida brasiliensis Rabies Virus variant | LA18518-3 | ||
| Parastrellus hesperus Rabies Virus variant | LA18519-1 | ||
| Perimyotis subflavus Rabies Virus variant | LA18520-9 | ||
| Lasiurus cinereus Rabies Virus variant | LA18521-7 | ||
| Lasiurus borealis Rabies Virus variant | LA18522-5 | ||
| Lasiurus seminolus Rabies Virus variant | LA18523-3 | ||
| Desmodus rotundus Rabies Virus variant | LA18524-1 | ||
| Myotis sp. Rabies Virus variant | LA18525-8 | ||
| Antrozous pallidus Rabies Virus Variant | LA18526-6 |
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.40
- Last Updated
- Version 2.79 (NAM)
- Change Reason
- Release 2.79: COMPONENT: Triggered by the coll w SCT:The understanding is that the word "identified" refers to the property "PRID", its presence in the component is redundant to the property. Therefore it is better to remove "identified" from the component.; Previous Releases: Changed method from Amplification/Sequencing because Amplification always occurs before sequencing
- Order vs. Observation
- Both
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG32755-7 | Rabies virus |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| cs-CZ | Czech (Czechia) | Virus vztekliny kmen identifikovaný: |
| de-DE | German (Germany) | Rabies-Virus-Stamm: |
| el-GR | Greek (Greece) | Στέλεχος ιού λύσσας: Synonyms: MICRO Nom Prid Pt XXX Αλληλούχιση Ιός Ιός λύσσας Στέλεχος ιού λύσσας |
| es-ES | Spanish (Spain) | Cepa del virus de la rabia: |
| es-MX | Spanish (Mexico) | Se identifica la cepa del virus de la rabia: |
| fr-FR | French (France) | Rage virus souche: |
| it-IT | Italian (Italy) | Rabbia, ceppo virus: Synonyms: Ceppo del virus della rabbia Microbiologia Presenza o Identità Punto nel tempo (episodio) Virus della rabbia |
| nl-NL | Dutch (Netherlands) | rabiësvirus strain: Synonyms: hondsdolheidsvirus; |
| pl-PL | Polish (Poland) | Wirus wścieklizny szczep: Synonyms: wynik kategorialny |
| pt-BR | Portuguese (Brazil) | Identificação da cêpa do vírus da Raiva: |
| tr-TR | Turkish (Turkey) | Kuduz virüsü suşu: Synonyms: Dizi tayini |
| zh-CN | Chinese (China) | 狂犬病病毒株: Synonyms: RABV; |
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LOINC Copyright
Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://