73693-4

African swine fever virus DNA [Cycle Threshold #] in Tissue by NAA with probe detection

Active

Term Description

The quantitative cross/cycle threshold (Ct) value may be reported for real-time PCR-based assays. The value is defined by the number of PCR cycles required for the fluorescent signal of a given product (targeted DNA) to cross the threshold (i.e. exceed background level). In general, the lower the Ct value, the greater the amount of targeted nucleic acid and vice versa. The interpretation (e.g. positive, negative, indeterminate) is determined based on a cut-off value. The submitter's lab reports the interpretation in OBX.8 segment of HL7 messaging.

Part Descriptions

LP19869-4 African swine fever virus
African swine fever virus (ASFV) is the causative agent of African swine fever. ASFV infects domestic pigs, warthogs and bushpigs, as well as soft ticks. The virus causes a lethal haemorraghic disease in domestic pigs, some isolates can cause death of animals within as little as a week after infection. In all of the other species the virus causes no obvious disease. ASFV is endemic to Sub-Saharan Africa and exists in the wild through a cycle of infection between ticks and wild pigsbushpigswarthogs. ASFV was first described after European settlers brought pigs into areas endemic with ASFV and as such is an example of an 'emerging infection'. The virus itself is a large DNA virus with a genome containing at least 150 genes. The number of genes differs slightly between different isolates of the virus. ASFV has similarities to the other large DNA viruses e.g., poxvirus, iridovirus, mimivirus. More recently ASFV has been associated with AIDS as a possible causal agent. Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details. Source: Wikipedia, African swine fever virus (Wikipedia)

LP19869-4 African swine fever virus
The lone species of the genus Asfivirus. It infects domestic and wild pigs, warthogs, and bushpigs. Disease is endemic in domestic swine in many African countries and Sardinia. Soft ticks of the genus Ornithodoros are also infected and act as vectors. Source: National Library of Medicine, MeSH 2006

LOINC Names Get Info

Fully-Specified Name: African swine fever virus DNA:ThreshNum:Pt:Tiss:Qn:Probe.amp.tar
Long Common Name: African swine fever virus DNA [Cycle Threshold #] in Tissue by NAA with probe detection
Short Name: ASFV DNA Ct Tiss Qn NAA+probe
Display Name: African swine fever virus DNA NAA+probe (Tiss) [ThreshNum]
Consumer Name Alpha Get Info: African Swine Fever virus, Tissue

Part Model Get Info

Component
African swine fever virus DNA
LP37005-3
- Analyte
  African swine fever virus DNA
  LP37005-3
  - Component Numerator
    African swine fever virus DNA
    LP37005-3
    - Component Numerator Core
      African swine fever virus
      LP19869-4
    - Component Numerator Core Suffix
      DNA
      LP32416-7
  - Component Denominator
    NULL
    - Component Denominator Core
      NULL
    - Component Denominator Core Suffix
      NULL
- Challenge
  NULL
- Adjustment
  NULL
- Count
  NULL
Property
ThreshNum
LP188772-0
Time
Pt
LP6960-1
- Time Core
  Pt
  LP6960-1
- Time Modifier
  NULL
System
Tiss
LP7641-6
- System Core
  Tiss
  LP7641-6
- Super System
  NULL
Scale
Qn
LP7753-9
Method
Probe.amp.tar
LP6464-4

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.44
Last Updated: Version 2.63 (MIN)
Change Reason: Changed property from 'ThresNum' to clarify the property name.
Order vs. Observation: Both

Language Variants Get Info

Tag	Language	Translation
cs-CZ	Czech (Czechia)	Virus afrického moru prasat DNA:Prahová hodnota:Časový bod:Tkáně a stěry:Kvantitativní:Amplifikace nukleových kyselin s detekcí sondou
el-GR	Greek (Greece)	Ιός αφρικανικής πανώλης των χοίρων DNA:ThreshNum:Pt:Ιστός:Qn:Ανιχνευτής.ενίσχυση.στόχου Synonyms: DNA MICRO Pt Qn ThreshNum Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Ιός Ιός αφρικανικής πανώλης των χοίρων Ιστός Πυρετός Χοίρος
es-ES	Spanish (Spain)	Virus de la peste porcina africana ADN:ThreshNnum:Punto temporal:Tejido:Qn:Sonda con amplificación dirigida Synonyms: Cuantitativo
es-MX	Spanish (Mexico)	ADN del virus de la peste porcina africana:ThreshNum:Punto temporal:Tejido y frotis:Cuantitativo:Amplificación de ácidos nucleicos con detección de sonda
fr-FR	French (France)	Peste porcine africaine virus ADN:Cycle seuil:Ponctuel:Tissu:Numérique:PCR amplification de cible
it-IT	Italian (Italy)	Peste suina africana, virus DNA:Thresnum:Pt:Tessuto:Qn:Sonda.amp.tar Synonyms: Limite di soglia Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Tessuto & Strisci Virus della peste suina africana
nl-NL	Dutch (Netherlands)	Afrikaanse-varkenspestvirus DNA:drempelwaarde nummer:moment:weefsel en uitstrijkjes:kwantitatief:probe-detectie Synonyms: probe.amp.tar
pl-PL	Polish (Poland)	Wirus afrykańskiego pomoru świń DNA:wartość progowa:punkt w czasie:tkanka i rozmazy:ilościowy:sonda.amplifikacja.cel Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy DNA wirusa afrykańskiego pomoru świń Kwas deoksyrybonukleinowy Wirus afrykańskiego pomoru świń
tr-TR	Turkish (Turkey)	African swine fever virüsü DNA:EşikDeğ:Zmlı:Doku:Kant:Prob.amf.hdf Synonyms: BAK Eşik Değer
zh-CN	Chinese (China)	非洲猪瘟病毒 DNA:阈值循环圈数:时间点:组织与涂片:定量型:探针法.基因扩增.靶向 Synonyms: ASFV DNA ASFV;昏睡病;昏睡症;烂肠瘟;猪瘟;非洲烂肠瘟;非洲猪热病;非洲猪热病病毒;非洲猪瘟传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向去氧核糖核酸;脱氧核糖核酸去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA）发烧;热病可用数量表示的;定量性;数值型;数量型;连续数值型标尺微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间未作说明的组织;组织;组织 & 涂片猪科动物;猪肉界值数;界限数;阀值数;临界值数;阈值循环数;阈值数;达到阈值时的循环圈数;荧光信号到达设定阈值时所经历的循环数;Ct 值;Cycle threshold;循环阈值经过扩增的脱氧核糖核酸探针非洲猪热病病毒 DNA

Example Units

Unit	Source
{Ct_value}	Example UCUM Units

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LOINC Copyright

Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.