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Status Information

Status
DEPRECATED
Reason
Duplicate
Comment
The "Probe.mag capture" Method has been deprecated and replaced with the more general "Probe" Method since the "mag capture" portion represents how the nucleic acids are isolated, which is not a distinction made in the LOINC Method for molecular tests. Given that updating the Method would change the meaning of the term, a new term was created to replace the existing term as recommended by the Special Topics workgroup on PCR-based Methods and approved by the LOINC Lab Committee at the June 2017 meeting.
Map-ToLong Common NameMapping Guidance
88266-2Mycobacterium sp rRNA [Identifier] by Probe in Positive blood culture

Term Description

Magnetic bead arrays coupled to oligonucleotides are used to capture and discriminate 16S rRNA from members of the Mycobacterium genus. rRNA capture assays (rCapA) do not involve DNA amplification and therefore avoid amplicon contamination. Identification of mycobacterium cultures, both from patients suspected of tuberculosis or nontuberculous mycobacteria (NTM) infection, is important for clinical diagnosis and treatment management. PMID: 22396779
Source: Regenstrief LOINC

Part Description

LP183540-6   Probe.mag capture
Nucleic acid is first concentrated and purified using a bead-based method, followed by a oligonucleotide probe detection of sequence of interest with signal enhancement. Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name
Mycobacterium sp rRNA:Prid:Pt:Bld.pos growth:Nom:Probe.mag capture
Long Common Name
Deprecated Mycobacterium sp rRNA [Identifier] by Nucleic acid capture and probe detection in Positive blood culture
Short Name
Deprecated Mycobacterium rRNA Bld Pos Prb Mag
Display Name
Mycobacterium sp rRNA Nucleic acid capture and probe detection Nom (Pos bld culture)
Consumer Name Alpha Get Info
Mycobacterium sp, Infected blood

Part Model Get Info

  • Component
    Mycobacterium sp rRNA
    LP39076-2
    • Analyte
      Mycobacterium sp rRNA
      LP39076-2
      • Component Numerator
        Mycobacterium sp rRNA
        LP39076-2
        • Component Numerator Core
          Mycobacterium sp
          LP18667-3
        • Component Numerator Core Suffix
          rRNA
          LP32424-1
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    Prid
    LP6850-4
  • Time
    Pt
    LP6960-1
  • System
    Bld.pos growth
    LP183539-8
    • System Core
      Bld.pos growth
      LP183539-8
    • Super System
      NULL
       
  • Scale
    Nom
    LP7750-5
  • Method
    Probe.mag capture
    LP183540-6

Example Answer List: LL2878-8

Source: Regenstrief LOINC
AnswerCodeScoreAnswer ID
Mycobacterium abscessusLA16933-6
Mycobacterium aviumLA20997-5
Mycobacterium gordonaeLA21003-1
Mycobacterium kansasiiLA19287-4
Mycobacterium malmoenseLA21001-5
Mycobacterium marinumLA21002-3
Mycobacterium tuberculosisLA20996-7
Mycobacterium xenopiLA20998-3
Negative for tested species of MycobacteriumLA20995-9

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.48
Last Updated
Version 2.63 (DEL)
Order vs. Observation
Both

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Mycobacterium sp rRNA:Přítomnost nebo identita:Časový bod:Krev pozitivní kultivace:Nominální:Hybridizace s magnetickým záchytem
el-GRGreek (Greece)Mycobacterium sp (Μυκοβακτηρίδιο) rRNA:Prid:Pt:Αίμα.θετική ανάπτυξη:Nom:Ανιχνευτής.μαγνητική σύλληψη
Synonyms: MICRO Mycobacterium sp (Μυκοβακτηρίδιο) Nom Prid Pt rRNA Αίμα Αίμα.θετική ανάπτυξη Ανιχνευτής Ανιχνευτής.μαγνητική σύλληψη
es-ESSpanish (Spain)Micobacteria sp rRNA:Presencia o identidad:Punto temporal:Sangre crecimiento positivo:Nom:Hibridación por capturas magnéticas
es-MXSpanish (Mexico)ARNr de Mycobacterium sp:Presencia o identidad:Punto temporal:Hemocultivo positivo:Nominal:Hibridación de captura magnética
fr-FRFrench (France)Mycobacterium ARNr:Identification:Ponctuel:Hémoculture positive:Résultat textuel:Sonde de capture magnétique
it-ITItalian (Italy)Mycobacterium sp rRNA:Prid:Pt:Emocolture positive:Nom:Sonda.cattura mag
Synonyms: Ibridizzazione cattura magnetica Microbiologia Presenza o Identità Punto nel tempo (episodio) Sangue Sonda di DNA
pt-BRPortuguese (Brazil)Mycobacterium sp rRNA:Ident:Pt:Sg/após desenvolvimento:Nom:Sonda de DNA.mag captura
zh-CNChinese (China)分枝杆菌属单个未知种 rRNA:存在与否或特征标识:时间点:血液.生长阳性:名义型:探针.磁捕获
Synonyms: AFB 分支杆菌 分支杆菌 rRNA 分支杆菌;分支杆菌属;分枝杆菌;劳瘵;痨;痨病;结核;结核病;肺结核;分枝杆菌单个未知种 分支杆菌属 分支杆菌属 rRNA 分枝杆菌 rRNA 分枝杆菌属 分类型应答;分类型结果;名义性;名称型;名词型;名词性;标称性;没有自然次序的名义型或分类型应答 劳瘵 存在;存在与否;特征标识;身份;身份标识 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 抗酸 抗酸杆菌 抗酸杆菌（Acid fast bacillus，AFB） 抗酸菌 时刻;随机;随意;瞬间 核糖体核糖核酸;核糖核酸 RNA 核蛋白体 RNA 核蛋白体 RNA（Ribosomal RNA，RRNA） 核蛋白体核糖核酸 核醣体 RNA 物种 生物种 痨 痨病 磁捕获杂交法;磁性捕获杂交法;磁力捕获杂交法;Magnetic capture hybridization 结核 结核病 肺结核 脱氧核糖核酸探针 血;血液 血液.阳性生长;血培养阳性;阳性血培养;阳性血液培养;全血.生长阳性

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=74733-7