Version 2.77

Term Description

The goose/Guangdong lineage H5 viruses emerged in the late 90s in Asia and subsequently became the only lineage of viruses known to be highly pathogenic to poultry and sustained in wild birds. The World Health Organization recognizes these viruses under a unified H5 clade nomenclature. Viruses from this lineage, specifically clade 2.3.4.4, were introduced into North American flyways in late 2014 via the Bering Strait into the Pacific flyway and again in late 2021 into the Atlantic flyway. PMID: 25855748 The NALHN influenza A molecular assay (matrix 2009) works well for the detection of this viral clade and is the primary surveillance tool. As a screening tool, the NAHLN H5 assay does not distinguish geographic lineage nor pathotype (LPAI vs HPAI). This clade specific assay uses real-time reverse transcriptase PCR targeted to clade H5 2.3.4.4.
Source: Regenstrief LOINC

Fully-Specified Name

Component
Influenza virus A H5 RNA
Property
ThreshNum
Time
Pt
System
XXX
Scale
Qn
Method
Probe.amp.tar

Additional Names

Short Name
FLUAV H5 RNA Ct Spec Qn NAA+probe
Display Name
FLUAV H5 RNA NAA+probe (Specimen) [ThreshNum]
Consumer Name Alpha Get Info
Influenza A H5, Specimen

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.52
Last Updated
Version 2.74
Change Reason
Release 2.74: DefinitionDescription: Per updated information from NAHLH; add clarity and updated context. ; COMPONENT: Per updated information from NAHLH; add clarity and updated context.; Previous Releases: Changed property from 'ThresNum' to clarify the property name.
Order vs. Observation
Both

Member of these Panels

LOINC Long Common Name
97733-0 Influenza virus types A and B and subtypes RNA panel - Specimen by NAA with probe detection

Member of these Groups Get Info

LOINC Group Group Name
LG32757-3 Influenza virus

Language Variants Get Info

Tag Language Translation
de-DE German (Germany) Influenza-Virus A H5 RNA:Ct-Wert:Zeitpunkt:XXX:Quantitativ:Zielfragmentamplifikation mit Sondendetektion
es-ES Spanish (Spain) Hemaglutinina H5 del virus Influenza A RNA:ThreshNnum:Punto temporal:XXX:Qn:Sonda con amplificación dirigida
Synonyms: Cuantitativo
es-MX Spanish (Mexico) Virus de la influenza A H5 icA ARN:ThreshNum:Punto temporal:XXX:Cuantitativo:Amplificación de ácidos nucleicos con detección de sonda
fr-FR French (France) Influenza virus A H5 ARN:Cycle seuil:Ponctuel:Milieux divers:Numérique:PCR amplification de cible
it-IT Italian (Italy) Influenza A H5, virus RNA:Thresnum:Pt:XXX:Qn:Sonda.amp.tar
Synonyms: Limite di soglia Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza A Virus dell''influenza A H5
nl-NL Dutch (Netherlands) Influenzavirus A H5 RNA:drempelwaarde nummer:moment:XXX:kwantitatief:probe-detectie
Synonyms: probe.amp.tar
tr-TR Turkish (Turkey) İnfluenza virüsü A H5 RNA:EşikDeğ:Zmlı:XXX:Kant:Prob.amf.hdf
Synonyms: Eşik Değer
zh-CN Chinese (China) 流感病毒 A 型血凝素 H5 型 RNA:阈值循环圈数:时间点:XXX:定量型:探针法.基因扩增.靶向
Synonyms: A 型 A 型流感;A 型流感病毒;FLUA;FLUAV;家禽鼠疫;流感 A;流感 A 型;流感甲型;流感病毒甲型;甲型流感;甲型流感病毒;瘟疫;禽流感;禽流行性感冒;禽疫;鸡瘟 A 型流感病毒血凝素 H5 型 RNA A 型流感病毒血凝素 H5 型;FLUA HA H5;FLUAV HA H5;流感病毒甲型血凝素 H5 型;甲型流感病毒血凝素 H5 型 FLUA HA H5 RNA FLUAV HA H5 RNA FLUV;Influ;列性感冒病毒;流行性感冒病毒 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 可用数量表示的;定量性;数值型;数量型;连续数值型标尺 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 核糖核酸;Ribonucleic acid 流感病毒甲型血凝素 H5 型 RNA 甲型流感病毒血凝素 H5 型 RNA 界值数;界限数;阀值数;临界值数;阈值循环数;阈值数;达到阈值时的循环圈数;荧光信号到达设定阈值时所经历的循环数;Ct 值;Cycle threshold;循环阈值 经过扩增的 脱氧核糖核酸探针

Example Units

Unit Source
{Ct_value} Example UCUM Units

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=77605-4