LOINC Panel Details 82159-5 Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

82160-3 Adenovirus DNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Adenovirus DNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP14061-3 Adenovirus
Adenoviruses, medium-sized (90-100 nm), non-enveloped icosohedral viruses with double-stranded DNA, have over 50 immunologically distinct types that cause infections in humans. Adenoviruses usually cause respiratory illness with symptoms ranging from the common cold to pneumonia, croup, and bronchitis. Adenoviruses can cause other illnesses such as gastroenteritis, conjunctivitis, cystitis, and less commonly, neurological disease. Infants and individuals with weakened immune systems are at high risk for severe complications of adenovirus infection and adenoviruses commonly cause acute respiratory illness in military recruits. Some asymptomatic people infected with adenoviruses have ongoing infections in their tonsils, adenoids, and intestines and can shed the virus for months or years. The virus can persist outside the body for long periods. Adenovirus infections can be detected using antigen detection, polymerase chain reaction assay, virus isolation, and serology. Typing is usually done by hemagglutination-inhibition and/or neutralization with type-specific antisera or by molecular methods. As of October 2014 there is no adenovirus vaccine for the general public, however an oral vaccine against types 4 and 7 was approved by the U.S. Food and Drug Administration in March 2011 for U.S. military personnel. The vaccine is recommended by the U.S. Department of Defense for military recruits entering basic training in order to prevent acute respiratory disease. Most adenovirus infections are mild and typically require only treatment of symptoms. Source: Centers for Disease Control and Prevention, CDC: Adenovirus

Fully-Specified Name

Component: Adenovirus DNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: HAdV DNA Nph Ql NAA+non-probe
Display Name: Adenovirus DNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Adenovirus, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1670

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG34060-0	Adenovirus DNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Adenovirus DNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Adenovirus ADN:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ADN de adenovirus:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Adénovirus, ADN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Adénovirus ADN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Adenovirus DNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
uk-UA	Ukrainian (Ukraine)	Аденовірус ДНК:Наявність або Поріг:МоментЧасу:Носоглотка:Порядково:Детекція без зонда.цільова аміпліфікація НК Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Adeno virus; Amplif; Amplification; Amplified; Deoxyribonucleic acid; DNA NUCLEIC ACID PROBE; DNA probe; HAdV; ID; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Nasopharynx; Nucleic acid sequence based analysis; Ordinal; PCR; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Screen; SDA; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CN	Chinese (China)	腺病毒 DNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: AdV;AV;腙样病毒;腺样病毒依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向去氧核糖核酸;脱氧核糖核酸去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA）存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

87621-9 Bordetella parapertussis IS1001 DNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

The qualitative detection of the IS1001 insertional element DNA sequence of the Bordetella parapertussis genome in nasopharyngeal specimens. This term was created for, but not limited in use to, BioFire Diagnostic FilmArray Respiratory Panel 2 assay, a multiplex PCR-based assay which uses melt curve analysis for the detection of various respiratory tract infection-causing pathogens.
Source: Regenstrief LOINC

Part Descriptions

LP248336-2 Bordetella parapertussis IS1001
The repetitive insertion sequence targets pIS1001 and hIS1001 are present in multiple copies per genome of Bordetella parapertussis and B. holmesii, respectively. The "p" in pIS1001 is for parapertussis and "h" in hIS1001 is for holmesii. These targets along with other target sequences (e.g. IS481) are used to detect and differentiate between B. pertussis, B. parapertussis, B. holmesii and other Bordetella species. PMID: 21940464 Source: Regenstrief LOINC

Fully-Specified Name

Component: Bordetella parapertussis IS1001 DNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: B parap IS1001 DNA Nph Ql NAA+non-probe
Display Name: B. parapertussis IS1001 DNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Bordetella parapertussis IS1001, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.63
Last Updated: Version 2.73
Change Reason: Removed "p" from "pIS1001" in Component to better represent the name of this insertion sequence (IS) element present in various Bordetella species.
Order vs. Observation: Both
Common Test Rank Get Info: 2716

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG50885-9	Bordetella parapertussis IS1001 DNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Bordetella parapertussis IS1001 DNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Bordetella parapertussis pIS1001 ADN:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ADN de Bordetella parapertussis IS1001:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-FR	French (France)	Bordetella parapertussis IS1001 ADN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Bordetella parapertussis pIS1001 DNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
zh-CN	Chinese (China)	副百日咳博德特菌 IS1001 DNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向副百日咳博德特菌（副百日咳博德特氏菌） IS1001;副百日咳博德特菌 pIS1001 去氧核糖核酸;脱氧核糖核酸去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA）存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间百日咳经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82179-3 Bordetella pertussis.pertussis toxin promoter region [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Bordetella pertussis DNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP206591-2 Bordetella pertussis.pertussis toxin promoter region
The pertussis toxin (PT) promoter region is involved in the regulation of virulence factors for Bordetella pertussis and is a commonly used target for the DNA-based diagnosis of B. pertussis infections. PMID: 10618063 Since the PT promoter region is present in other Bordetella species, including B. parapertussis, generic primers may be used for rapid detection and differentiation of the species. PMID: 8815088 Source: Regenstrief LOINC

Fully-Specified Name

Component: Bordetella pertussis.pertussis toxin promoter region
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: B pert.PT Prmt Nph Ql NAA+non-probe
Display Name: B. pertussis toxin promoter region NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Bordetella pertussis.pertussis toxin promoter region, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Change Reason: Changed Bordetella pertussis toxin to Bordetella pertussis.pertussis toxin for accuracy.
Order vs. Observation: Both
Common Test Rank Get Info: 1786

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG41615-2	Bordetella pertussis
LG34124-4	Bordetella pertussis.pertussis toxin promoter region\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Bordetella pertussis.Pertussis-Toxin-Promoterregion:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Región promotora de la toxina de Bordetella pertussis:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	Bordetella pertussis región promotora de la toxina pertussis:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Bordetella pertussis.pertussis toxine région du promoteur:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Bordetella pertussis.pertussis toxine région du promoteur:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Bordetella pertussis regione promotore di tossina:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
zh-CN	Chinese (China)	百日咳博德特菌百日咳毒素启动子区域:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向区;地区;局部存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间百日咳;百日咳博德特氏菌;胎咳;鸡咳百日咳博德特菌（百日咳博德特氏菌）.百日咳毒素百日咳博德特菌（百日咳博德特氏菌）百日咳毒素启动子区域（启动子区、启动区）经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

85360-6 Bordetella pertussis+bronchiseptica+holmesii IS481 DNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

This test is primarily for the detection of the IS481 insertional element DNA of the Bordetella pertussis genome in human nasopharyngeal swab samples taken from patients suspected of having respiratory tract infection caused by B. pertussis. The IS481 insertion sequence can also be found in B. holmesii and B. bronchiseptica strains, so respiratory infections with either Bordetella pertussis, B. holmesii or B. bronchiseptica may yield positive test results in this assay, which does not differentiate between these strains. Since B. pertussis and B. holmesii present with similar clinical symptoms, additional testing would need to be performed to differentiate between these strains. This term was created for, but not limited in use to, the illumigene Pertussis DNA Amplification Assay, which uses loop-mediated isothermal DNA amplification (LAMP) technology to detect the IS481 insertional element.
Source: Regenstrief LOINC

Part Descriptions

LP247783-6 Bordetella pertussis+bronchiseptica+holmesii IS481
A repetitive insertion sequence, IS481, has been found to be present in up to 100 copies within the genome of B. pertussis. In B. holmesii, 8-10 copies of this insertion sequence can be found. PMID: 11326023 On rare occasion, the B. bronchiseptica genome may contain a copy of this sequence. Thus, all these species may test positive in assays targeting the IS481 sequence. Concurrent culturing is used to differentiate species from B. pertussis and confirm the organism, while targeted DNA testing allows preliminary results to be reported the same day that the specimen is received. Source: Regenstrief LOINC

Fully-Specified Name

Component: Bordetella pertussis+bronchiseptica+holmesii IS481 DNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: B pert+bron+holm IS481 Nph NAA+non-Probe
Display Name: B. pertussis+bronchiseptica+holmesii IS481 DNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Bordetella pertussis+bronchiseptica+holmesii IS481, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.61
Last Updated: Version 2.63
Order vs. Observation: Both

Example Answer List LL360-9

Answer	Code	Score	Answer ID
Positive Copyright http://snomed.info/sct ID:10828004 Positive (qualifier value)			LA6576-8
Negative Copyright http://snomed.info/sct ID:260385009 Negative (qualifier value)			LA6577-6

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG50886-7	Bordetella pertussis+bronchiseptica+holmesii IS481 DNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Bordetella pertussis+bronchiseptica+holmesii IS481 DNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Bordetella pertussis+bronchiseptica+holmesii IS481 ADN:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	Bordetella pertussis + bronchiseptica + holmesii IS481 ADN:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-FR	French (France)	Bordetella pertussis+bronchiseptica+holmesii IS481 ADN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Bordetella pertussis+bronchiseptica+holmesii IS481 DNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
zh-CN	Chinese (China)	百日咳博德特菌+支气管败血性百日咳博德特菌+霍氏博德特菌 IS481 DNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向去氧核糖核酸;脱氧核糖核酸去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA）存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间百日咳;百日咳博德特氏菌;胎咳;鸡咳百日咳博德特菌（百日咳博德特氏菌）+支气管败血性百日咳博德特菌（支气管败血性博德特氏菌、支气管败血波氏杆菌、败血波氏杆菌、支气管败血性博德氏杆菌）+霍氏博德特菌（霍氏鲍特菌） IS481 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

Third Party Copyright

This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.

This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.

Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to http://www.snomed.org/snomed-ct/get-snomed-ct or info@snomed.org<mailto:info@snomed.org>. This may incur a fee in SNOMED International non-Member countries.

82178-5 Chlamydophila pneumoniae DNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Chlamydophila pneumoniae DNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP14396-3 Chlamydophila pneumoniae
Chlamydophila pneumoniae belongs to the Chlamydiaceae bacterial family. C pneumoniae is a frequent cause of acute respiratory infection, such as, pharyngitis, bronchitis, sinusitis, and community-acquired pneumonia (CAP). It is typically spread by coughing or sneezing, and initial infection usually occurs in school-age children. Most infections are self-limited, but outbreaks can occur in group settings such as schools and barracks. IgG antibodies to C. pneumonia can persist for years after infection. PMID: 22514397 Source: Regenstrief LOINC

Fully-Specified Name

Component: Chlamydophila pneumoniae DNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: C pneum DNA Nph Ql NAA+non-probe
Display Name: C. pneumoniae DNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Chlamydophila pneumoniae, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1717

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
90439-1	Atypical pneumonia pathogens panel - Respiratory system specimen by NAA with probe detection
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG34076-6	Chlamydophila pneumoniae DNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Chlamydophila pneumoniae DNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Chlamydia pneumoniae ADN:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ADN de Chlamydophila pneumoniae:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Chlamydophila pneumoniae, ADN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Chlamydia pneumoniae ADN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Chlamydophila pneumoniae DNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
uk-UA	Ukrainian (Ukraine)	Chlamydophila pneumoniae ДНК:Наявність або Поріг:МоментЧасу:Носоглотка:Порядково:Детекція без зонда.цільова аміпліфікація НК Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; C pneum; C pneumo; C pneumoniae; Chlamydia; Chlamydia pneumoniae; CPN; Deoxyribonucleic acid; DNA NUCLEIC ACID PROBE; DNA probe; ID; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Nasopharynx; Nucleic acid sequence based analysis; Ordinal; PCR; Pneu; pneum; Pneumo; Pneumon; Pneumonia; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Screen; SDA; Strand Displacement Amplification; TMA; Transcription mediated amplification; Twar agent
zh-CN	Chinese (China)	肺炎嗜性衣原体 DNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: CPN;Twar 制剂;Twar 株;肺炎衣原体;肺炎衣原体 Twar 株;鹦鹉热衣原体TWAR-TW株亲衣原体亲衣原体属依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向去氧核糖核酸;脱氧核糖核酸去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA）嗜性衣原体属嗜衣体嗜衣体属嗜衣原体嗜衣原体属存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间经过扩增的脱氧核糖核酸探针衣原体衣原体属鼻咽标本;鼻咽部;鼻咽部标本

82163-7 Human coronavirus 229E RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Human coronavirus 229E RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP35708-4 Human coronavirus 229E
Human coronavirus 229E (HCoV229E) is a single-stranded, positive-sense, RNA virus species in the Alphacoronavirus genus of the subfamily Coronavirinae, in the family Coronaviridae, of the order Nidovirales. HCoV229E is associated with a range of respiratory symptoms, ranging from the common cold to high-morbidity outcomes such as pneumonia and bronchiolitis. It is also among the Coronaviruses most frequently co-detected with other respiratory viruses. PMID: 20554810 Source: Regenstrief LOINC

Fully-Specified Name

Component: Human coronavirus 229E RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: HCoV 229E RNA Nph Ql NAA+non-probe
Display Name: HCoV 229E RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Human coronavirus 229E, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1692

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG32771-4	Human coronavirus
LG34137-6	Human coronavirus 229E RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Humanes Coronavirus 229E RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Coronavirus Humano 229E RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del coronavirus humano 229E:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Coronavirus humain 229E ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Coronavirus humain 229E ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Coronavirus umano 229E RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda HCoV Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
zh-CN	Chinese (China)	人类冠状病毒 229E 型 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: HCoV;人冠状病毒人冠状病毒 229E 型 RNA 人类冠状病毒（人冠状病毒、HCoV） 229E 型依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

88891-7 Human coronavirus 229E+HKU1+NL63+OC43 RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

This assay detects nucleic acid sequences from Coronavirus subtypes 229E, HKU1, OC43, and NL63 RNA in nasopharyngeal swabs using PCR and non-probe detection methods, such as melt curve analysis. A single Coronavirus result is reported when any of the four Coronavirus subtypes are detected. This term was created for, but not limited in use to, BioFire Diagnostic FilmArray Respiratory Panel EZ assay.
Source: Regenstrief LOINC

Part Descriptions

LP263694-4 Human coronavirus 229E+HKU1+NL63+OC43 RNA
Coronaviruses are positive-sense, single-stranded RNA viruses. The envelope of the virus has glycoprotein spikes that give it a crown-like appearance. There are six strains of coronavirus within two subgroups that infect humans. The strains of human coronaviruses that commonly infect people worldwide include 229E and NL63 in the Alpha subgroup and OC43 and HKU1 in the Beta subgroup. These viruses most often cause common cold symptoms, but can also lead to pneumonia. Severe acute respiratory syndrome coronavirus (SARS-CoV) and the Middle East Respiratory Syndrome Coronavirus (MERS-CoV) are less common but cause more severe illness.[https://www.cdc.gov/coronavirus/types.html][https://academic.oup.com/cid/article/37/7/929/422314] Source: Regenstrief LOINC

Fully-Specified Name

Component: Human coronavirus 229E+HKU1+NL63+OC43 RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: HCoV 229E+HKU1+NL63+OC43 Np Ql NAA+nonpr
Display Name: HCoV 229E+HKU1+NL63+OC43 RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Human coronavirus 229E+HKU1+NL63+OC43, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.64
Last Updated: Version 2.66
Change Reason: Updated order of analytes in Component from Human coronavirus 229E+HKU1+OC43+NL63 RNA for consistency across terms.
Order vs. Observation: Both

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG32771-4	Human coronavirus
LG50873-5	Human coronavirus 229E+HKU1+NL63+OC43 RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
es-ES	Spanish (Spain)	Coronavirus Humano 229E+HKU1+NL63+OC43 RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	Coronavirus humano 229E + HKU1 + NL63 + OC43 ARN:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-FR	French (France)	Coronavirus humain 229E+HKU1+NL63+OC43 ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Coronavirus umano 229E+HKU1+NL63+OC43 RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda HCoV Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
zh-CN	Chinese (China)	人类冠状病毒 229E+HKU1+NL63+OC43 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: HCoV;人冠状病毒人类冠状病毒（人冠状病毒、HCoV） 229E 型人类冠状病毒（人冠状病毒、HCoV） 229E+HKU1+NL63+OC43 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82161-1 Human coronavirus HKU1 RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Human coronavirus HKU1 RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP111518-9 Human coronavirus HKU1
Human coronavirus (HCoV) HKU1 was identified in Hong Kong in 2005. It is associated with upper and lower respiratory tract infections. Source: Regenstrief LOINC

LP111518-9 Human coronavirus HKU1
HCoV-HKU1 is a common cause of both upper and lower respiratory tract self-limiting infections, most frequently in young children. Without laboratory diagnosis, typically through reverse transcription polymerase chain reaction (RT-PCR) of respiratory tract samples, HCoV-HKU1 respiratory tract infections cannot be distinguished from infections cause by other respiratory viruses. Treatment is of symptoms and in-line with general guidelines for support of viral respiratory infections. PMID: 21994538 Source: Regenstrief LOINC

Fully-Specified Name

Component: Human coronavirus HKU1 RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: HCoV HKU1 RNA Nph Ql NAA+non-probe
Display Name: HCoV HKU1 RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Human coronavirus HKU1, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1691

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG32771-4	Human coronavirus
LG34135-0	Human coronavirus HKU1 RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Humanes Coronavirus HKU1 RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Coronavirus humano HKU1 RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del coronavirus humano HKU1:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Coronavirus humain HKU1 ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Coronavirus humain HKU1 ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Coronavirus umano HKU1 RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda HCoV Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
zh-CN	Chinese (China)	人类冠状病毒 HKU1 型 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: HCoV;人冠状病毒人类冠状病毒（人冠状病毒、HCoV） HKU1 型依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82162-9 Human coronavirus NL63 RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Human coronavirus NL63 RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP35709-2 Human coronavirus NL63
Human coronavirus (HCoV-NL63) was first identified in 2004 in a Dutch seven-month old infant with respiratory illness, but is now present world wide. HCoV-NL63 typically infects children and the immunocommpromised, with mild upper respiratory symptoms (cough, runny nose, fever) or more actue lower respiratory tract involvement such as bronchiolitis and croup. It is cause of up to 10% of all respiratory diseases. Most commonly, reverse transcription polymerase chain reaction (RT-PCR) and other nucleic acid tests of nasopharyngeal samples are used for diagnosing coronavirus infections. Source: Regenstrief LOINC

Fully-Specified Name

Component: Human coronavirus NL63 RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: HCoV NL63 RNA Nph Ql NAA+non-probe
Display Name: HCoV NL63 RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Human coronavirus NL63, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1690

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG32771-4	Human coronavirus
LG34136-8	Human coronavirus NL63 RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Humanes Coronavirus NL63 RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Coronavirus Humano NL63 RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del coronavirus humano NL63:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Coronavirus humain NL63 ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Coronavirus humain NL63 ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Coronavirus umano NL63 RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda HCoV Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
zh-CN	Chinese (China)	人类冠状病毒 NL63 型 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: HCoV;人冠状病毒人冠状病毒 NL63 型 RNA 人类冠状病毒（人冠状病毒、HCoV） NL63 型依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82164-5 Human coronavirus OC43 RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Human coronavirus OC43 RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP35710-0 Human coronavirus OC43
Coronaviruses, named for the crown-like spikes on their surface, are common viruses that cause mild to moderate upper-respiratory tract illnesses of a short duration. There are four main sub-groupings of coronaviruses, known as alpha, beta, gamma, and delta. The six coronaviruses that can infect humans are: alpha coronaviruses 229E and NL63, and beta coronaviruses OC43, HKU1, SARS-CoV (the coronavirus that causes severe acute respiratory syndrome, or SARS), and MERS-CoV (Middle East Respiratory Syndrome, or MERS). Infections are common with human coronaviruses 229E, NL63, OC43, and HKU1. The exceptions are SARS-CoV and MERS-CoV. SARS-CoV (severe acute respiratory syndrome) was first recognized in China in November 2002 causing a worldwide outbreak from 2002 to 2003. Since 2004, there have no reported cases of SARS-CoV infection. MERS-CoV, first reported in Saudi Arabia in 2012, has caused illness in hundreds of people from several countries. All cases to date have been linked to countries in and near the Arabian Peninsula. Source: Regenstrief LOINC, CDC: Coronavirus

Fully-Specified Name

Component: Human coronavirus OC43 RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: HCoV OC43 RNA Nph Ql NAA+non-probe
Display Name: HCoV OC43 RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Human coronavirus OC43, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1693

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG32771-4	Human coronavirus
LG34138-4	Human coronavirus OC43 RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Humanes Coronavirus OC43 RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Coronavirus Humano OC43 RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del coronavirus humano OC43:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Coronavirus humain OC43 ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Coronavirus humain OC43 ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Coronavirus umano OC43 RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda HCoV Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
zh-CN	Chinese (China)	人类冠状病毒 OC43 型 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: HCoV;人冠状病毒人冠状病毒 OC43 型 RNA 人类冠状病毒（人冠状病毒、HCoV） OC43 型依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82165-2 Human metapneumovirus RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Human metapneumovirus RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP34982-6 Human metapneumovirus
Human metapneumovirus (hMPV) is a Paramyxoviridae family virus that causes upper and lower respiratory tract infections in the very young, elderly and those with compromised immune systems. hMPV can vary in its size, shape and staining properties, and shares similar structure with avian pneumovirus (aMPV) and human respiratory syncytial virus (hRSV). Typically, molecular testing methods, like reverse transcriptase PCR (RT-PCR), are used to detect hMPV. hMPV is thought to be responsible for about 5% to 10% of pediatric hospitalizations of those suffering from acute respiratory tract infection. PMID: 24841931 Source: Regenstrief LOINC

Fully-Specified Name

Component: Human metapneumovirus RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: hMPV RNA Nph Ql NAA+non-probe
Display Name: hMPV RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Human metapneumovirus, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1671

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG34090-7	Human metapneumovirus RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Humanes Metapneumovirus RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Metaneumovirus humano RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del metaneumovirus humano:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Métapneumovirus humain ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Métapneumovirus humain ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Metapneumovirus umano RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
uk-UA	Ukrainian (Ukraine)	Метапневмовірус людини РНК:Наявність або Поріг:МоментЧасу:Носоглотка:Порядково:Детекція без зонда.цільова аміпліфікація НК Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; DNA NUCLEIC ACID PROBE; DNA probe; hMPV; ID; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Nasopharynx; Nucleic acid sequence based analysis; Ordinal; PCR; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Ribonucleic acid; Screen; SDA; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CN	Chinese (China)	人类偏肺病毒 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: hMPV RNA hMPV;人中间肺炎病毒;人类间肺病毒;人类间质肺病毒;偏肺病毒肺炎人中间肺炎病毒 RNA 人类偏肺病毒 RNA 人类间质肺病毒 RNA 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82168-6 Influenza virus A H1 2009 pandemic RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Influenza virus A H1 2009 pandemic RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP94776-9 Influenza virus A H1 2009 pandemic
An influenza virus that had never been identified as a cause of infections in people before the 2009 H1N1 (Swine flu) pandemic. Genetic analyses of this virus showed that it originated from animal influenza viruses and was unrelated to the human seasonal H1N1 viruses that had been in general circulation among people since 1977. Antibodies to the seasonal H1N1 virus did not protect against the pandemic H1N1 virus, however a significant percentage of people age 65 and older had some immunity against the pandemic virus. After early outbreaks in North America in April 2009 the new influenza virus spread rapidly around the world. Unlike typical seasonal flu patterns, the new virus caused high levels of summer infections in the northern hemisphere, and then even higher levels of activity during cooler months. The virus also led to patterns of death and illness not normally seen in influenza infections. Most of the deaths occurred among younger people, including those who were otherwise healthy. Source: Regenstrief LOINC, WHO: What is the pandemic (H1N1) 2009 virus?

Fully-Specified Name

Component: Influenza virus A H1 2009 pandemic RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: FLUAV H1 2009 pan RNA Nph NAA+non-probe
Display Name: FLUAV H1 2009 pand RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Influenza A H1 2009 Pand, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1705

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG32757-3	Influenza virus
LG34094-9	Influenza virus A H1 2009 pandemic RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Influenza-Virus A H1 (Pandemie 2009) RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Hemaglutinina H1 del virus Influenza A de origen porcino RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN pandémico del virus de la influenza A H1 2009:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Virus de l'influenza A H1 2009 pandémique ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Influenza virus A H1N1(2009) ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Influenza A H1 2009 pandemica, virus RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza A Virus dell''influenza A H1 Virus dell''influenza A H1 2009 pandemica
zh-CN	Chinese (China)	流感病毒 A 型血凝素 H1 型 2009 大流行 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: A 型 A 型流感;A 型流感病毒;FLUA;FLUAV;家禽鼠疫;流感 A;流感 A 型;流感甲型;流感病毒甲型;甲型流感;甲型流感病毒;瘟疫;禽流感;禽流行性感冒;禽疫;鸡瘟 A 型流感病毒血凝素 H1 型;FLUA HA H1;FLUAV HA H1;流感病毒甲型血凝素 H1 型;甲型流感病毒血凝素 H1 型 A 型流感病毒血凝素 H1 型;FLUA HA H1;FLUAV HA H1;流感病毒甲型血凝素 H1 型;甲型流感病毒血凝素 H1 型;流感病毒 A 型血凝素 H1 型 2009 世界流行 FLUV;Influ;列性感冒病毒;流行性感冒病毒传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82167-8 Influenza virus A H1 RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Influenza virus A H1 RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP35168-1 Influenza virus A H1
The influenza virus A (FLUVA) genome is composed of eight gene segments (PB2, PB1, PA, HA, NP, NA, M, NS1) that code for 11 proteins. Two of the genes, hemagglutinin (HA) and neuraminidase (NA), determine the structure of the two primary surface proteins of influenza viruses. The HA and NA gene sequences are used to determine the Influenza virus subtype. Currently there are 16 subtypes of HA and 9 subtypes of NA known, but only H 1, 2 and 3, and N 1 and 2 are commonly found in humans. PMID: 17458769 The M gene segment, which encodes two matrix proteins (M1 and M2), may also be used as a target in PCR-based assays for detection of FLUVA in various specimens. Source: Regenstrief LOINC

Fully-Specified Name

Component: Influenza virus A H1 RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: FLUAV H1 RNA Nph Ql NAA+non-probe
Display Name: FLUAV H1 RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Influenza A H1, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1704

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG32757-3	Influenza virus
LG34092-3	Influenza virus A H1 RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Influenza-Virus A H1 RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Hemaglutinina H1 del virus Influenza A RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del virus de la influenza A H1:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	H1 influenza type A ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Influenza virus A H1 ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Influenza A H1, virus RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza A Virus dell''influenza A H1
zh-CN	Chinese (China)	流感病毒 A 型血凝素 H1 型 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: A 型 A 型流感;A 型流感病毒;FLUA;FLUAV;家禽鼠疫;流感 A;流感 A 型;流感甲型;流感病毒甲型;甲型流感;甲型流感病毒;瘟疫;禽流感;禽流行性感冒;禽疫;鸡瘟 A 型流感病毒血凝素 H1 型 RNA A 型流感病毒血凝素 H1 型;FLUA HA H1;FLUAV HA H1;流感病毒甲型血凝素 H1 型;甲型流感病毒血凝素 H1 型 FLUA HA H1 RNA FLUAV HA H1 RNA FLUV;Influ;列性感冒病毒;流行性感冒病毒传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 流感病毒甲型血凝素 H1 型 RNA 甲型流感病毒血凝素 H1 型 RNA 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82169-4 Influenza virus A H3 RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Influenza virus A H3 RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP35176-4 Influenza virus A H3
The influenza virus A (FLUVA) genome is composed of eight gene segments (PB2, PB1, PA, HA, NP, NA, M, NS1) that code for 11 proteins. Two of the genes, hemagglutinin (HA) and neuraminidase (NA), determine the structure of the two primary surface proteins of influenza viruses. The HA and NA gene sequences are used to determine the Influenza virus subtype. Currently there are 16 subtypes of HA and 9 subtypes of NA known, but only H 1, 2 and 3, and N 1 and 2 are commonly found in humans. PMID: 17458769 The M gene segment, which encodes two matrix proteins (M1 and M2), may also be used as a target in PCR-based assays for detection of FLUVA in various specimens. Source: Regenstrief LOINC

Fully-Specified Name

Component: Influenza virus A H3 RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: FLUAV H3 RNA Nph Ql NAA+non-probe
Display Name: FLUAV H3 RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Influenza A H3, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1706

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG32757-3	Influenza virus
LG34093-1	Influenza virus A H3 RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Influenza-Virus A H3 RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Hemaglutinina H3 del virus Influenza A RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del virus de la influenza A H3:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	H3 influenza type A ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Influenza virus A H3 ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Influenza A H3, virus RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza A Virus dell''influenza A H3
zh-CN	Chinese (China)	流感病毒 A 型血凝素 H3 型 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: A 型 A 型流感;A 型流感病毒;FLUA;FLUAV;家禽鼠疫;流感 A;流感 A 型;流感甲型;流感病毒甲型;甲型流感;甲型流感病毒;瘟疫;禽流感;禽流行性感冒;禽疫;鸡瘟 A 型流感病毒血凝素 H3 型 RNA A 型流感病毒血凝素 H3 型;FLUA HA H3;FLUAV HA H3;流感病毒甲型血凝素 H3 型;甲型流感病毒血凝素 H3 型 FLUA HA H3 RNA FLUAV HA H3 RNA FLUV;Influ;列性感冒病毒;流行性感冒病毒传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 流感病毒甲型血凝素 H3 型 RNA 甲型流感病毒血凝素 H3 型 RNA 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82166-0 Influenza virus A RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Influenza virus A RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP14239-5 Influenza virus A
Influenza viruses, from the family Orthomyxoviridae, are enveloped negative-strand RNA viruses with segmented genomes containing seven to eight gene segments. Of the five genera in the family, only influenza A virus (IAV), influenza B and C are medically relevant to humans. Aquatic birds harboring avian IAV are the likely natural reservoir for all known IAV subtypes and are probably the original source of all human pandemic IAV strains. IAV maintained in wild birds have been associated with stable host switch events to novel hosts, including most often to domestic poultry but also to horses, swine, toothed whales and humans. The influenza virus life cycle begins with the binding of viral HA to host cell receptors. Endocytosis and HA-mediated fusion of the viral and cellular membranes occurs. Viral ribonucleoprotein complexes are released into the cytoplasm, travel to the nucleus, then are replicated and transcribed by the viral polymerase complex. The new viruses are formed and bud when the newly formed ribonucleicprotein complexes and structural proteins reach the plasma membrane. Further research is needed to better understand how IAVs switch hosts and the viral genetic changes that underlie human adaptation. IAV causes respiratory infections in humans ranging from asymptomatic to fatal. Pandemics are attributed to "novel" viruses which possess a viral hemagglutinin (HA) to which humans do not have immunity. PMID: 20542248 ] PMID: 25812763
Influenza viruses A and B are single-stranded RNA enveloped viruses belonging to the Orthomyxoviridae family. The symptoms of infection of Influenza A and B include fever, cough, sore throat, rhinorrhea, nasal congestion, headache, myalgia and malaise. Some patients may experience gastrointestinal symptoms including watery diarrhea, vomiting and abdominal pain. The influenza viruses spread rapidly in enclosed spaces with a documented rate of infection of 70% following a common source of exposure. Infection occurs in the respiratory epithelium in both the upper and lower respiratory tract, and the virus can be found in many specimen types, including nasal aspirates, nasal or nasopharyngeal swabs, throat swabs, sputum and tracheal aspirates. When infection rates reach epidemic proportions, hospitalization of children and elderly patients rises as does the mortality rates of elderly patients.(Manual of Clinical Microbiology, 11th edition, James H. Jorgensen; Karen C. Carroll; Guido Funke; Michael A Pfaller; Marie Louise Landry; Sandra S. Richter; David W. Warnock) Source: Regenstrief LOINC

Fully-Specified Name

Component: Influenza virus A RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: FLUAV RNA Nph Ql NAA+non-probe
Display Name: FLUAV RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Influenza A (Flu A), Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1673

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG32757-3	Influenza virus
LG34064-2	Influenza virus A RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Influenza-Virus A RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Virus Influenza A RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del virus de la influenza A:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Virus de l'influenza A ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Influenza virus A ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Influenza A, virus RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza A
uk-UA	Ukrainian (Ukraine)	Вірус грипу А РНК:Наявність або Поріг:МоментЧасу:Носоглотка:Порядково:Детекція без зонда.цільова аміпліфікація НК Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; Avian influenza; Bird flu; DNA NUCLEIC ACID PROBE; DNA probe; FLUA; FLUAV; FLUV; Fowl plague; ID; Infectious Disease; InfectiousDisease; Influ; Influenza A; Influenza A virus; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Nasopharynx; Nucleic acid sequence based analysis; Ordinal; PCR; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Ribonucleic acid; Screen; SDA; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CN	Chinese (China)	流感病毒 A 型 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: A 型 A 型流感;A 型流感病毒;FLUA;FLUAV;家禽鼠疫;流感 A;流感 A 型;流感甲型;流感病毒甲型;甲型流感;甲型流感病毒;瘟疫;禽流感;禽流行性感冒;禽疫;鸡瘟 A 型流感病毒 RNA FLUA RNA FLUAV RNA FLUV;Influ;列性感冒病毒;流行性感冒病毒传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 流感病毒甲型 RNA 甲型流感病毒 RNA 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82170-2 Influenza virus B RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Influenza virus B RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP14240-3 Influenza virus B
Influenza virus from the family Orthomyxoviridae are enveloped negative-strand RNA viruses with segmented genomes containing seven to eight gene segments. Of the five genera in the family, only influenza A virus (IAV), influenza B and C viruses are medically relevant to humans. Influenza A and B viruses have a similar structure whereby these viruses each contain eight discrete single-stranded RNA gene segments, each encoding at least one protein. While having a close phylogenetic relationship, influenza virus types A and B manifest very differently. While IAV infects birds, humans and other mammals, influenza B only infects humans and seals. Although both viruses cause human respiratory infection seasonally in temperate climate regions and more continually in the tropics, influenza B is normally less prevalent and causes less severe disease than IAV viruses. Research is ongoing to determine the evolutionary and epidemiological factors that shape the genetic diversity of influenza B virus. PMID: 25812763 [CDC:flu/about/viruses/types] Source: Regenstrief LOINC

Fully-Specified Name

Component: Influenza virus B RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: FLUBV RNA Nph Ql NAA+non-probe
Display Name: FLUBV RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Influenza B (Flu B), Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1669

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG32757-3	Influenza virus
LG34065-9	Influenza virus B RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Influenza-Virus B RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Virus Influenza B RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del virus de la influenza B:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Virus de l'influenza B ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Influenza virus B ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Influenza B, virus RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus dell''influenza Virus dell''influenza B
uk-UA	Ukrainian (Ukraine)	Вірус грипу B РНК:Наявність або Поріг:МоментЧасу:Носоглотка:Порядково:Детекція без зонда.цільова аміпліфікація НК Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; DNA NUCLEIC ACID PROBE; DNA probe; FLUB; FLUBV; FLUV; ID; Infectious Disease; InfectiousDisease; Influ; Influenza B; Influenza B virus; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Nasopharynx; Nucleic acid sequence based analysis; Ordinal; PCR; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Ribonucleic acid; Screen; SDA; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CN	Chinese (China)	流感病毒 B 型 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: B 型 B 型流感;B 型流感病毒;FLUB;FLUBV;乙型流感;乙型流感病毒;流感 B;流感 B 型;流感乙型;流感病毒乙型 B 型流感病毒 RNA FLUB RNA FLUBV RNA FLUV;Influ;列性感冒病毒;流行性感冒病毒乙型流感病毒 RNA 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 流感病毒乙型 RNA 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

88889-1 Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

This assay detects nucleic acid sequences from Middle east respiratory syndrome coronavirus (MERS-CoV) RNA in nasopharyngeal swabs using PCR and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, BioFire Diagnostic FilmArray Respiratory Panel 2 Plus assay.
Source: Regenstrief LOINC

Part Descriptions

LP173753-7 Middle East respiratory syndrome coronavirus
Middle East Respiratory Syndrome (MERS) is an illness caused by the virus Middle East Respiratory Syndrome Coronovirus (MERS-CoV). The illness was first reported in Saudi Arabia in 2012, but was later found to have originated in Jordan in 2012. MERS has been found in camels leading to speculation that they may be the initial reservoir for the virus. The largest outbreak of MERS that has occurred outside of the Arabian Peninsula was in the Republic of Korea in 2015 and was linked to an individual who had been traveling in the Arabian Peninsula. The virus is probably spread through respiratory secretions from infected individuals though the exact mode of transmission is under investigation. Infection with MERS begins with an incubation period of 5-6 days followed by a severe acute illness that involves fever, shortness of breath and for patients with comorbidities or reduced immunity can lead to pneumonia and kidney failure. The mortality rate of MERS is 3-4 out of 10 people who are infected, though most of the people who die have underlying conditions. In addition, some people experience only cold-like symptoms and others have no symptoms at all. In the United States, most state laboratories are approved to test for MERS-CoV using the real-time reverse transcription-PCR assay developed by the CDC. The assay can be run on respiratory, serum and stool specimens.[CDC: coronavirus/mers] Source: Regenstrief LOINC

Fully-Specified Name

Component: Middle east respiratory syndrome coronavirus RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: MERS-CoV RNA Nph Ql NAA+non-probe
Display Name: MERS-CoV RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Middle East respiratory syndrome coronavirus (MERS-CoV), Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.64
Last Updated: Version 2.64
Order vs. Observation: Both

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG50060-9	Middle East respiratory syndrome coronavirus RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Middle East respiratory syndrome coronavirus (MERS CoV) RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Coronavirus del sindrome respiratorio de Oriente medio RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	Síndrome respiratorio de Oriente Medio coronavirus ARN:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-FR	French (France)	Coronavirus MERS ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Sindrome respiratoria mediorientale da Coronavirus (MERS) RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
zh-CN	Chinese (China)	中东呼吸综合征冠状病毒 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: 中东呼吸道综合征冠状病毒;中东呼吸系统综合征冠状病毒;中東呼吸症候群冠狀病毒;MERS-CoV;MERSCoV;Middle east respiratory syndrome coronavirus;中东呼吸综合症冠状病毒依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82177-7 Mycoplasma pneumoniae DNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Mycoplasma pneumoniae DNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP14249-4 Mycoplasma pneumoniae
Mycoplasma pneumoniae is a filamentous cell without a cell well. It has an attachment organelle at its tip with protein adhesions which attach to sialoglycoproteins or sialoglycolipid receptors on the tracheal epithelium. Pneumonia is induced by local immunologic and phagocytic responses.
Mycoplasmas generally are the smallest self-replicating organisms possessing the smallest genomes (500 to 1000 genes). Mycoplasmas have several surface antigens; antibodies to these surface antigens inhibit their growth. While various serological tests have been developed and are useful in classification, the infections are persistent, frequently difficult to detect and difficult to cure. Mycoplasma pneumonaie infection affects the upper and lower respiratory tracts. Symptoms including cough, fever and headache may persist for several weeks. Infection occurs worldwide and affects mainly children five to nine years old. [NCBI Books:NBK7637] Source: Regenstrief LOINC

Fully-Specified Name

Component: Mycoplasma pneumoniae DNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: M pneumo DNA Nph Ql NAA+non-probe
Display Name: M. pneumoniae DNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Mycoplasma pneumoniae, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1679

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
90439-1	Atypical pneumonia pathogens panel - Respiratory system specimen by NAA with probe detection
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG34140-0	Mycoplasma pneumoniae DNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Mycoplasma pneumoniae DNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Mycoplasma pneumoniae ADN:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ADN de Mycoplasma pneumoniae:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Mycoplasma pneumoniae, ADN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Mycoplasma pneumoniae ADN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Mycoplasma pneumoniae DNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
uk-UA	Ukrainian (Ukraine)	Mycoplasma pneumoniae ДНК:Наявність або Поріг:МоментЧасу:Носоглотка:Порядково:Детекція без зонда.цільова аміпліфікація НК Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; Deoxyribonucleic acid; DNA NUCLEIC ACID PROBE; DNA probe; Enzootic pneumonia; ID; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; M pneumo; M pneumonia; M pneumoniae; Microbiology; Myco; Myco pneu; Mycoplas; Mycoplasm; Mycoplasmoides pneumoniae; Mycoplasmosis; Mycoplsm; NAA+non-probe; NAA+probe; NAAT; NASBA; Nasopharynx; Nucleic acid sequence based analysis; Ordinal; PCR; Pneu; pneum; Pneumo; Pneumon; Pneumonia; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Screen; SDA; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CN	Chinese (China)	肺炎支原体 DNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向原质菌去氧核糖核酸;脱氧核糖核酸去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA）存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性支原体属支原体病支原菌支原质体时刻;随机;随意;瞬间枝原体类菌质体经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82171-0 Parainfluenza virus 1 RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Parainfluenza virus 1 RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP14241-1 Parainfluenza virus 1
HPIV-1 causes biennial outbreaks of croup in the fall (presently in the United States during odd numbered years). HPIVs are negative-sense, single-stranded RNA viruses that possess fusion and hemagglutinin-neuraminidase glycoprotein "spikes" on their surface. HPIVs are spread from respiratory secretions through close contact with infected persons or contact with contaminated surfaces or objects. HPIVs are ubiquitous and infect most people during childhood. Source: Regenstrief Institute

Fully-Specified Name

Component: Parainfluenza virus 1 RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: HPIV1 RNA Nph Ql NAA+non-probe
Display Name: Parainfluenza virus 1 RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Parainfluenza virus 1, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1694

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG34067-5	Parainfluenza virus 1 RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Parainfluenza-Virus 1 RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde Synonyms: Human respirovirus 1
es-ES	Spanish (Spain)	Virus parainfluenza tipo 1 RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del virus de la parainfluenza 1:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Virus parainfluenza 1 ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Parainfluenza virus 1 ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Parainfluenza virus 1 RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus parainfluenzale Virus parainfluenzale di tipo 1
uk-UA	Ukrainian (Ukraine)	Вірус Parainfluenza 1 РНК:Наявність або Поріг:МоментЧасу:Носоглотка:Порядково:Детекція без зонда.цільова аміпліфікація НК Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; DNA NUCLEIC ACID PROBE; DNA probe; HPIV; HPIV1; Human respirovirus 1; i; ID; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Nasopharynx; Nucleic acid sequence based analysis; Ordinal; Para; Parainflu; Parainfluenza type 1; Parainfluenza type I; PCR; PI1; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Ribonucleic acid; Screen; SDA; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CN	Chinese (China)	副流感病毒 1 型 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: Ⅰ HPIV;类流感病毒 HPIV1 RNA HPIV1;PI1;副流感病毒 I 型 I PI1 RNA 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向副流感病毒副流感病毒 I 型 RNA 副流感菌副流行性感冒存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 类流感经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

88890-9 Parainfluenza virus 1+2+3+4 RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

This assay detects RNA from Parainfluenza virus types 1-4 in nasopharyngeal swabs using PCR and non-probe detection methods, such as melt curve analysis. A single Parainfluenza virus result is reported when any of the four subtypes are detected. This term was created for, but not limited in use to, BioFire Diagnostic FilmArray Respiratory Panel EZ assay.
Source: Regenstrief LOINC

Part Descriptions

LP145690-6 Parainfluenza virus 1+2+3+4
Human parainfluenza viruses (HPIVs) have been recognized as a cause of respiratory tract infections for many decades. They belong to the Paramyxoviridae family, subfamily Paramyxovirinae, and are classified into 4 serotypes. Serotype 4 can be further subdivided into 2 antigenic subtypes, HPIV-4A and HPIV-4B. Source: Centers for Disease Control and Prevention, CDC

LP145690-6 Parainfluenza virus 1+2+3+4
Parainfluenza virus is from the family Paramyxoviridae and the genera Paramyxovirus which includes the parainfluenza viruses and the mumps virus. Paramyxoviruses are particles up to 300 nm in diameter. They are spiral, tube-like symmetrical nucleocapsids which contain a monopartite, single-stranded, negative-sense RNA genome and an RNA-directed RNA polymerase. There is a matrix protein at the base of a double-layered lipid envelope which contains spikes with two glycoproteins, a viral attachment protein and a fusion protein. The viral protein spikes in parainfluenza viruses have hemagglutinating and neuraminidase activities. As all paramyxoviruses are labile, they are quickly inactivated (e.g., by heat, detergents, ultraviolet light). Primary infections occur in young children and cause mild or severe upper and lower respiratory tract infections. Reinfection is common and results in milder manifestation. Transmission is by direct contact or by droplets. Parainfluenza virus diseases are usually endemic although they can be epidemic. [NCBI Books:NBK8461] Source: Regenstrief LOINC

Fully-Specified Name

Component: Parainfluenza virus 1+2+3+4 RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: HPIV 1+2+3+4 RNA Nph Ql NAA+non-probe
Display Name: Parainfluenza virus 1+2+3+4 RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Parainfluenza virus 1+2+3+4, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.64
Last Updated: Version 2.64
Order vs. Observation: Both

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG50887-5	Parainfluenza virus 1+2+3+4 RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Parainfluenza-Virus 1+2+3+4 RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Parainfluenza virus 1+2+3+4 RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	Virus de la parainfluenza 1 + 2 + 3 + 4 ARN:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-FR	French (France)	Parainfluenza virus 1+2+3+4 ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Parainfluenza virus 1+2+3+4 RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus parainfluenzale Virus parainfluenzale di tipo 1 Virus parainfluenzale di tipo 1+2+3 Virus parainfluenzale di tipo 1+2+3+4
zh-CN	Chinese (China)	副流感病毒 1+2+3+4 型 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: Ⅰ Ⅱ Ⅲ HPIV;类流感病毒 HPIV1;PI1;副流感病毒 I 型 HPIV1+2+3 HPIV1+2+3+4 I II III 三传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向副流感病毒副流感菌副流行性感冒叁存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 类流感经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82172-8 Parainfluenza virus 2 RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Parainfluenza virus 2 RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP14242-9 Parainfluenza virus 2
Human parainfluenza viruses (HPIVs) are a group of four distinct serotypes of single-stranded RNA viruses belonging to the paramyxovirus family. They are the second most common cause of lower respiratory tract infection in younger children. Repeated infection throughout the life of the host is not uncommon. Symptoms of later breakouts include upper respiratory tract illness as in a cold and sore throat. The incubation period of all four serotypes is 1 to 7 days. Parainfluenza viruses can be detected via cell culture, immunofluorescent microscopy, and PCR. Though no vaccines currently exist, research into vaccines for HPIV-1, -2, and -3 is underway. Parainfluenza viruses last only a few hours in the environment and are inactivated by soap and water. Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details. Source: Wikipedia, Parainfluenza virus 2 (Wikipedia)

Fully-Specified Name

Component: Parainfluenza virus 2 RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: HPIV2 RNA Nph Ql NAA+non-probe
Display Name: Parainfluenza virus 2 RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Parainfluenza virus 2, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1695

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG34068-3	Parainfluenza virus 2 RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Parainfluenza-Virus 2 RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde Synonyms: Human rubulavirus 2
es-ES	Spanish (Spain)	Virus parainfluenza tipo 2 RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del virus de la parainfluenza 2:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Virus parainfluenza 2 ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Parainfluenza virus 2 ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Parainfluenza virus 2 RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus parainfluenzale Virus parainfluenzale di tipo 2
uk-UA	Ukrainian (Ukraine)	Вірус Parainfluenza 2 РНК:Наявність або Поріг:МоментЧасу:Носоглотка:Порядково:Детекція без зонда.цільова аміпліфікація НК Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; DNA NUCLEIC ACID PROBE; DNA probe; HPIV; HPIV2; Human rubulavirus 2; ID; II; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Nasopharynx; Nucleic acid sequence based analysis; Ordinal; Para; Parainflu; Parainfluenza type 2; Parainfluenza type II; PCR; PI2; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Ribonucleic acid; Screen; SDA; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CN	Chinese (China)	副流感病毒 2 型 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: Ⅱ HPIV;类流感病毒 HPIV2 RNA HPIV2;PI2;副流感病毒 II 型 II PI2 RNA 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向副流感病毒副流感病毒 II 型 RNA 副流感菌副流行性感冒存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 类流感经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82173-6 Parainfluenza virus 3 RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Parainfluenza virus 3 RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP14243-7 Parainfluenza virus 3
HPIV-3 peak activity occurs during the spring and early summer months each year, but the virus can be isolated througout the year. HPIVs are negative-sense, single-stranded RNA viruses that possess fusion and hemagglutinin-neuraminidase glycoprotein "spikes" on their surface. HPIVs are spread from respiratory secretions through close contact with infected persons or contact with contaminated surfaces or objects. HPIVs are ubiquitous and infect most people during childhood. Source: Regenstrief Institute

Fully-Specified Name

Component: Parainfluenza virus 3 RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: HPIV3 RNA Nph Ql NAA+non-probe
Display Name: Parainfluenza virus 3 RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Parainfluenza virus 3, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1696

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG34069-1	Parainfluenza virus 3 RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Parainfluenza-Virus 3 RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde Synonyms: Human respirovirus 3
es-ES	Spanish (Spain)	Virus parainfluenza tipo 3 RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del virus de la parainfluenza 3:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Virus parainfluenza 3 ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Parainfluenza virus 3 ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Parainfluenza virus 3 RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus parainfluenzale Virus parainfluenzale di tipo 3
uk-UA	Ukrainian (Ukraine)	Вірус Parainfluenza 3 РНК:Наявність або Поріг:МоментЧасу:Носоглотка:Порядково:Детекція без зонда.цільова аміпліфікація НК Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; DNA NUCLEIC ACID PROBE; DNA probe; HPIV; HPIV3; Human respirovirus 3; ID; III; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Nasopharynx; Nucleic acid sequence based analysis; Ordinal; Para; Parainflu; Parainfluenza type 3; Parainfluenza type III; PCR; PI3; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Ribonucleic acid; Screen; SDA; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CN	Chinese (China)	副流感病毒 3 型 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: Ⅲ HPIV;类流感病毒 HPIV3 RNA HPIV3;PI3;副流感病毒 III 型 III PI3 RNA 三传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向副流感病毒副流感病毒 III 型 RNA 副流感菌副流行性感冒叁存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 类流感经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82174-4 Parainfluenza virus 4 RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Parainfluenza virus 4 RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP35704-3 Parainfluenza virus 4
Human parainfluenza viruses (HPIVs) are common causes of respiratory tract disease in infants and young children. Each of the four HPIVs has different clinical and epidemiologic features. HPIV-4 is detected infrequently, and is less likely to cause severe disease; but it may be more common than once thought. Source: Centers for Disease Control and Prevention, CDC

LP35704-3 Parainfluenza virus 4
Human parainfluenza viruses (HPIVs) have been recognized as a cause of respiratory tract infections for many decades. They belong to the Paramyxoviridae family, subfamily Paramyxovirinae, and are classified into 4 serotypes. Serotype 4 can be further subdivided into 2 antigenic subtypes, HPIV-4A and HPIV-4B. Source: Centers for Disease Control and Prevention, CDC

Fully-Specified Name

Component: Parainfluenza virus 4 RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: HPIV4 RNA Nph Ql NAA+non-probe
Display Name: Parainfluenza virus 4 RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Parainfluenza virus 4, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1697

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG34070-9	Parainfluenza virus 4 RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Parainfluenza-Virus 4 RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde Synonyms: Human rubulavirus 4
es-ES	Spanish (Spain)	Virus Parainfluenza 4 RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del virus 4 de la parainfluenza:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Parainfluenza 4 ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Parainfluenza virus 4 ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Parainfluenza virus 4 RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus parainfluenzale Virus parainfluenzale di tipo 4
uk-UA	Ukrainian (Ukraine)	Вірус Parainfluenza 4 РНК:Наявність або Поріг:МоментЧасу:Носоглотка:Порядково:Детекція без зонда.цільова аміпліфікація НК Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; DNA NUCLEIC ACID PROBE; DNA probe; HPIV; HPIV4; Human rubulavirus 4; ID; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Nasopharynx; Nucleic acid sequence based analysis; Ordinal; Para; Parainflu; PCR; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Ribonucleic acid; Screen; SDA; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CN	Chinese (China)	副流感病毒 4 型 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: HPIV;类流感病毒 HPIV4 RNA HPIV4;PI4;副流感病毒 IV 型 PI4 RNA 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向副流感病毒副流感病毒 IV 型 RNA 副流感菌副流行性感冒存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 类流感经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82176-9 Respiratory syncytial virus RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in Respiratory syncytial virus RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP14244-5 Respiratory syncytial virus
Human respiratory syncytial virus (RSV), a negative-sense, single-stranded RNA virus of the family Paramyxoviridae, causes upper respiratory tract infections and bronchiolitis, an infection of the small airways that can cause wheezing and respiratory distress. Infants, especially those that were born prematurely, are particularly susceptible, and RSV bronchiolitis is a common cause of hospitalization for infants during the winter months. Certain groups of high-risk infants may be given palivizumab, a recombinant monoclonal antibody to RSV, as prophylaxis against RSV infection. Source: Regenstrief LOINC

LP39551-4 Respiratory syncytial virus RNA
The respiratory syncytial virus (RSV) is a member of the Paramyxoviridae family and is an enveloped pleomorphic virus. RSV is spread through contact with respiratory droplets, contact with the patient and contact with contaminated surfaces. The rate of transmission is affected by outside temperature, humidity and precipitation. RSV infection spreads faster when the temperature is low and the humidity is high in temperate zones and when rainfall levels are high in tropical climates. RSV causes severe lower respiratory infections in infants and young children. Infants born prematurely are particularly susceptible. Symptoms of RSV infection include cough, low-grade fever and rhinorrhea. High risk adult populations including patients in residential facilities, those with heart and lung diseases and immunocompromised patients are susceptible to severe RSV infection and significant morbidity.(Manual of Clinical Microbiology, 11th edition, James H. Jorgensen; Karen C. Carroll; Guido Funke; Michael A Pfaller; Marie Louise Landry; Sandra S. Richter; David W. Warnock) Source: Regenstrief LOINC

Fully-Specified Name

Component: Respiratory syncytial virus RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: RSV RNA Nph Ql NAA+non-probe
Display Name: RSV RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Respiratory syncytial virus (RSV), Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1638

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG34071-7	Respiratory syncytial virus RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Respiratorisches Synzytial-Virus RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Virus respiratorio sincitial RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del virus respiratorio sincitial:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Virus respiratoire syncytial ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Virus respiratoire syncytial ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Virus respiratorio sinciziale RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA VRS
uk-UA	Ukrainian (Ukraine)	Респіраторний синцитіальний вірус РНК:Наявність або Поріг:МоментЧасу:Носоглотка:Порядково:Детекція без зонда.цільова аміпліфікація НК Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; DNA NUCLEIC ACID PROBE; DNA probe; HRSV; ID; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Lung; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Nasopharynx; Nucleic acid sequence based analysis; Ordinal; PCR; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; Pulmonary; Pulmonology; QBR; QL; Qual; Qualitative; Random; Respiratory; Ribonucleic acid; RSV; Screen; SDA; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CN	Chinese (China)	呼吸道合胞病毒 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: HRSV RNA HRSV;RSV RSV RNA 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

82175-1 Rhinovirus+Enterovirus RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative detection of nucleic acid sequences in rhinovirus and enterovirus RNA in nasopharyngeal swabs by target amplification and non-probe detection methods, such as melt curve analysis. This assay does not distinguish between the two picornaviruses. This term was created for, but not limited in use to, the submitter's test kit, FilmArray Respiratory Panel (RP) v1.7.
Source: Regenstrief LOINC

Part Descriptions

LP35705-0 Rhinovirus+Enterovirus
Human rhinoviruses (HRVs) can be categorized into three genetically distinct HRV groups, designated groups A, B, and C, within the genus Enterovirus and the family Picornaviridae. HRVs are positive-sense, single-stranded-RNA (ssRNA) viruses of approximately 7,200 bp. HRVs, which are the cause of more than one-half of cold like illnesses, are commonly associated with upper respiratory tract infection, otitis media, and sinusitis. PCR testing for respiratory virus detection has led to the recognition of HRV as a lower respiratory tract pathogen as well, especially in patients with asthma, infants, elderly patients, and immunocompromised individuals. At this time there are no approved antiviral therapies, and treatment is primarily supportive. Source: Regenstrief LOINC, PMCID: PMC3553670

LP35705-0 Rhinovirus+Enterovirus
Enteroviruses are small, non-enveloped, single stranded RNA viruses in the picornavirus family and include coxsackievirus, rhinovirus, echovirus, and poliovirus species. They are the most common viral pathogen worldwide, and clinical manifestations range from mild, cold-like symptoms to severe infections, including encephalitis, aseptic (viral) meningitis, and myocarditis. Enterovirus infection has also been associated with the onset of type I diabetes mellitus. PMID: 23764548 Source: Regenstrief LOINC, PMID: 23764548

Fully-Specified Name

Component: Rhinovirus+Enterovirus RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: RV+EV RNA Nph Ql NAA+non-probe
Display Name: Rhinovirus+Enterovirus RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Rhinovirus+Enterovirus, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1672

Example Answer List LL744-4

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG34139-2	Rhinovirus+Enterovirus RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Rhinovirus + Enterovirus RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Rinovirus+Enterovirus RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	Rinovirus + ARN de enterovirus:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Rhinovirus+Entérovirus ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Rhinovirus+Entérovirus ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Rhinovirus+Enterovirus RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
zh-CN	Chinese (China)	鼻病毒+肠道病毒 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: EV RNA EV;肠病毒 EV-PCR RHV;感冒病毒 RV+EV RNA RV+EV;鼻病毒（感冒病毒、RV）+肠道病毒（肠病毒、EV）依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 经过扩增的肠病毒 RNA 肠病毒PCR 肠病毒探针.扩增.靶向肠病毒探针靶向扩增肠道病毒PCR 肠道病毒探针靶向扩增脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

94565-9 SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with non-probe detection

Term Description

Qualitative results for the detection of SARS coronavirus 2 (SARS-CoV-2) in nasopharyngeal specimens by nucleic acid amplification with non-probe based detection, such as melt curve analysis. Results may be based on multiple assays to determine the presence of the virus in a specimen. Testing is performed for the diagnosis of Coronavirus Disease 2019 (COVID-19).
Source: Regenstrief LOINC

Part Descriptions

LP417540-4 SARS coronavirus 2
The 2019 Novel Coronavirus (2019-nCoV) is a coronavirus first identified as the cause of a respiratory illness outbreak in Wuhan, China. Initially, the outbreak was linked to a large seafood and animal market and thought to only be spread by animal to person contact. Within a short time, a growing number of patients who had not been exposed to animal markets were diagnosed with the infection, indicating person-to-person transmission. As of January 2020, infections with 2019-nCoV had been reported internationally due to confirmed cases in travelers from Wuhan. Overall, clinical symptoms appear milder than SARS Coronavirus (SARS-CoV) and Middle East Respiratory Syndrome (MERS) Coronavirus (MERS-CoV) infections as do the fatality rate and transmissibility. PMID: 31953166 Reported illnesses range from minor or no respiratory symptoms to severe acute respiratory illness and death.

The full genome of the 2019-nCoV was first posted by Chinese health authorities in GenBank, the NIH genetic sequence database, and in the Global Initiative on Sharing All Influenza Data (GISAI) portal. This facilitated detection of the virus globally with subsequent sequences being nearly identical, suggesting a single, recent emergence from a virus related to bat coronaviruses and the SARS coronavirus. Source: LOINC

Reference Information

Type	Source	Reference
Webcontent	Lab Tests Online^®Copyright Copyright © 2021 Lab Tests Online. All rights reserved.	Coronavirus (COVID-19) Testing

Fully-Specified Name

Component: SARS coronavirus 2 RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: SARS-CoV-2 RNA Nph Ql NAA+non-probe
Display Name: SARS-CoV-2 (COVID-19) RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: SARS-CoV-2 (COVID-19), Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.68
Last Updated: Version 2.73
Order vs. Observation: Both
Common Test Rank Get Info: 1132

Example Answer List LL3713-6

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8
Equivocal Copyright http://snomed.info/sct ID:42425007 Equivocal (qualifier value)			LA11885-3
Invalid Copyright http://snomed.info/sct ID:455371000124106 Invalid result (qualifier value)			LA15841-2

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG50983-2	SARS coronavirus 2 RNA\|PrThr\|Sys:ANYResp
LG51017-8	SARSCoV2 detection
LG51019-4	SARSCoV2 molecular detection

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	SARS-Coronavirus 2 RNA:Nachweis oder Schwellenwert:Zeitpunkt:Nasopharynx:Ordinal:Zielfragmentamplifikation mit Detektion ohne Sonde
es-ES	Spanish (Spain)	Panel del SARS-CoV-2 (COVID-19) RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ARN del coronavirus 2 del SARS:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-FR	French (France)	Coronavirus SARS-CoV-2 ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
fr-CA	French (Canada)	coronavirus 2 du SRAS ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
it-IT	Italian (Italy)	SARS coronavirus 2 RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Coronavirus della SARS Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe SARS-CoV-2 (COVID-19) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
uk-UA	Ukrainian (Ukraine)	SARS коронавірус 2 РНК:Наявність або Поріг:МоментЧасу:Носоглотка:Порядково:Детекція без зонда.цільова аміпліфікація НК Synonyms: 2019 Novel Coronavirus; 2019-nCoV; 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; Corona virus; COVID19; COVID-19; DNA NUCLEIC ACID PROBE; DNA probe; ID; II; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Nasopharynx; Nucleic acid sequence based analysis; Ordinal; PCR; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Ribonucleic acid; SARS Coronavirus 1; SARS-CoV; SARS-CoV-1; SARS-CoV-2; Screen; SDA; Severe Acute Respiratory Syndrome; Strand Displacement Amplification; TMA; Transcription mediated amplification; Viral Pneumonias; Wuhan coronavirus
zh-CN	Chinese (China)	SARS 冠状病毒 2 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: 2019 新型冠状病毒;2019 年新型冠状病毒;2019-nCoV;SARS-CoV-2;新型冠状病毒肺炎;新冠肺炎;Coronavirus disease 2019;COVID-19;冠状病毒疾病2019;严重急性呼吸综合征;severe acute respiratory syndrome;SARS;传染性非典型肺炎;infectious atypical pneumonia;非典 Ⅱ II SARS;SARS 病毒;SARS-CoV;严重急性呼吸综合征;严重急性呼吸综合征病毒;萨斯病毒;非典;非典型肺炎;非典型肺炎病毒;非典病毒依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

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This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.

This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.

Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to http://www.snomed.org/snomed-ct/get-snomed-ct or info@snomed.org<mailto:info@snomed.org>. This may incur a fee in SNOMED International non-Member countries.

103559-1 Rhinovirus RNA [Presence] in Nasopharynx by NAA with non-probe detection

Part Descriptions

LP17714-4 Rhinovirus
Human rhinoviruses (HRVs) can be categorized into three genetically distinct HRV groups, designated groups A, B, and C, within the genus Enterovirus and the family Picornaviridae. HRVs are positive-sense, single-stranded-RNA (ssRNA) viruses of approximately 7,200 bp. HRVs, which are the cause of more than one-half of cold like illnesses, are commonly associated with upper respiratory tract infection, otitis media, and sinusitis. PCR testing for respiratory virus detection has led to the recognition of HRV as a lower respiratory tract pathogen as well, especially in patients with asthma, infants, elderly patients, and immunocompromised individuals. At this time there are no approved antiviral therapies, and treatment is primarily supportive. Source: Regenstrief LOINC, PMCID: PMC3553670

Fully-Specified Name

Component: Rhinovirus RNA
Property: PrThr
Time: Pt
System: Nph
Scale: Ord
Method: Non-probe.amp.tar

Additional Names

Short Name: Rhinovirus RNA Nph Ql NAA+non-probe
Display Name: Rhinovirus RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha Get Info: Rhinovirus, Nasopharynx

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.77
Last Updated: Version 2.77
Order vs. Observation: Both

Example Answer List LL360-9

Answer	Code	Score	Answer ID
Positive Copyright http://snomed.info/sct ID:10828004 Positive (qualifier value)			LA6576-8
Negative Copyright http://snomed.info/sct ID:260385009 Negative (qualifier value)			LA6577-6

Member of these Panels

LOINC	Long Common Name
82159-5	Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG50139-1	Rhinovirus RNA\|PrThr\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
es-ES	Spanish (Spain)	Rinovirus RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda
fr-CA	French (Canada)	Rhinovirus ARN:Présence-Seuil:Temps ponctuel:Nasopharynx:Ordinal:Non-sonde.amplification de cible
it-IT	Italian (Italy)	Rhinovirus RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
zh-CN	Chinese (China)	鼻病毒 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向 Synonyms: RHV RNA RHV;感冒病毒依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 经过扩增的脱氧核糖核酸探针鼻咽标本;鼻咽部;鼻咽部标本

Third Party Copyright

This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.

This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.

Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to http://www.snomed.org/snomed-ct/get-snomed-ct or info@snomed.org<mailto:info@snomed.org>. This may incur a fee in SNOMED International non-Member countries.

82159-5

Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Active

82160-3 Adenovirus DNA [Presence] in Nasopharynx by NAA with non-probe detection

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87621-9 Bordetella parapertussis IS1001 DNA [Presence] in Nasopharynx by NAA with non-probe detection

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82179-3 Bordetella pertussis.pertussis toxin promoter region [Presence] in Nasopharynx by NAA with non-probe detection

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85360-6 Bordetella pertussis+bronchiseptica+holmesii IS481 DNA [Presence] in Nasopharynx by NAA with non-probe detection

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82178-5 Chlamydophila pneumoniae DNA [Presence] in Nasopharynx by NAA with non-probe detection

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82163-7 Human coronavirus 229E RNA [Presence] in Nasopharynx by NAA with non-probe detection

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88891-7 Human coronavirus 229E+HKU1+NL63+OC43 RNA [Presence] in Nasopharynx by NAA with non-probe detection

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