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Term Description

Quantitative (Ct) result for detection of nucleic acids within the E1 region of Rubella virus RNA in various clinical samples or from cell culture.

Part Description

LP248008-7   Rubella virus E1 gene
Rubella virus genome consists of enveloped, non-segmented, positive sense RNA. It encodes three structural and two non-structural proteins. The structural proteins include capsid (C) and two glycoproteins, E2 and E1. The non-structural proteins include P150 and P90. PMID: 23351667 Genetic characterization of RuV genomes contributes to virus surveillance efforts. Genotyping is based on comparison of a 739 nucleotide sequence in the E1 coding region to reference virus sequences. According to the WHO nomenclature for Rubella virus, genotype names are indicated by a number (1 or 2) that indicates the clade that the genotype belongs to, followed by a letter that represents grouping within the clade. For genotypes that are considered provisional, a lower case letter is used, and when a genotype goes from provisional to accepted status, the letter is changed to upper case. For example, provisional genotypes 1h, 1i and 1j were established in 2007 and upgraded to 1H, 1I and 1J in 2013. http://www.who.int/wer/2013/wer8832.pdf Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name
Rubella virus E1 gene:ThreshNum:Pt:XXX:Qn:Probe.amp.tar
Long Common Name
Rubella virus E1 gene [Cycle Threshold #] in Specimen by NAA with probe detection
Short Name
RUBV E1 Ct Spec Qn NAA+probe
Display Name
Rubella virus E1 gene NAA+probe (Specimen) [ThreshNum]
Consumer Name Alpha Get Info
Rubella virus E1 gene, Specimen

Part Model Get Info

  • Component
    Rubella virus E1 gene
    LP248008-7
    • Analyte
      Rubella virus E1 gene
      LP248008-7
      • Component Numerator
        Rubella virus E1 gene
        LP248008-7
        • Component Numerator Core
          Rubella virus E1 gene
          LP248008-7
        • Component Numerator Core Suffix
          NULL
           
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    ThreshNum
    LP188772-0
  • Time
    Pt
    LP6960-1
  • System
    XXX
    LP7735-6
    • System Core
      XXX
      LP7735-6
    • Super System
      NULL
       
  • Scale
    Qn
    LP7753-9
  • Method
    Probe.amp.tar
    LP6464-4

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.61
Last Updated
Version 2.69 (MIN)
Order vs. Observation
Observation

Member of these Panels

LOINCLong Common Name
85795-3Rubella virus E1 gene and genotype panel - Specimen

Member of these Groups Get Info

LOINC GroupGroup Name
LG32766-4Rubella virus

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Virus zarděnek gen E1:Prahová hodnota:Časový bod:XXX:Kvantitativní:Amplifikace nukleových kyselin s detekcí sondou
de-DEGerman (Germany)Röteln-Virus E1-Gen:Ct-Wert:Zeitpunkt:XXX:Quantitativ:Zielfragmentamplifikation mit Sondendetektion
el-GRGreek (Greece)Γονίδιο E1 ιού ερυθράς:ThreshNum:Pt:XXX:Qn:Ανιχνευτής.ενίσχυση.στόχου
Synonyms: MICRO Pt Qn ThreshNum XXX Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Γονίδιο Γονίδιο E1 ιού ερυθράς Ιός Ιός ερυθράς
es-ESSpanish (Spain)Panel del Gen E1 del virus de la Rubeola:ThreshNnum:Punto temporal:XXX:Qn:Sonda con amplificación dirigida
Synonyms: Cuantitativo
es-MXSpanish (Mexico)Gen E1 del virus de la rubéola:ThreshNum:Punto temporal:XXX:Cuantitativo:Amplificación de ácidos nucleicos con detección de sonda
fr-FRFrench (France)Rubéole virus gène E1:Cycle seuil:Ponctuel:Milieux divers:Numérique:PCR amplification de cible
it-ITItalian (Italy)Rosolia virus, gene E1:Thresnum:Pt:XXX:Qn:Sonda.amp.tar
Synonyms: Gene E1 virus della rosolia Limite di soglia Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus della rosolia
nl-NLDutch (Netherlands)Rubellavirus E1-gen:drempelwaarde nummer:moment:XXX:kwantitatief:probe-detectie
Synonyms: probe.amp.tar rodehondvirus rodehondvirus E1 gen
pl-PLPolish (Poland)Wirus różyczki gen E1:wartość progowa:punkt w czasie:XXX:ilościowy:sonda.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Gen E1 wirusa różyczki
zh-CNChinese (China)风疹病毒 E1 基因:阈值循环圈数:时间点:XXX:定量型:探针法.基因扩增.靶向
Synonyms: RUBV 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 可用数量表示的;定量性;数值型;数量型;连续数值型标尺 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 界值数;界限数;阀值数;临界值数;阈值循环数;阈值数;达到阈值时的循环圈数;荧光信号到达设定阈值时所经历的循环数;Ct 值;Cycle threshold;循环阈值 经过扩增的 脱氧核糖核酸探针 遗传基因;遗传因子;吉恩;生物基因

Example Units

UnitSource
{Ct_value}Example UCUM Units

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=85796-1