86198-9

Neisseria meningitidis serogroup Y synF gene [Cycle Threshold #] in Specimen by NAA with probe detection

Active

Part Descriptions

LP248177-0 Neisseria meningitidis serogroup Y synF gene
SynF is a capsule biosynthesis gene that uniquely identifies Neisseria meningitidis serogroup Y from the other meningococcal serogroups.https://www.cdc.gov/meningitis/lab-manual/chpt10-pcr.html There has been a large increase in the proportion of meningococcal disease caused by N. meningitidis serogroup Y since 1989. In the mid-1990s, the incidence increased substantially in the United States (US) and during the past 10 years, it has also increased in Canada, Columbia and Norway. A potential cause of this shift is the fact that the polysaccharide capsule based vaccine formulated for serogroups A, C, W-135 and Y is ineffective against children under 2 years of age and has only been useful for outbreaks of the disease. Recent vaccines for serogroups A and C have proven to be more effective in that age group which has led to serogroup Y being the most likely cause of pneumonia from Neisseria meningitidis. Diagnosis can be confirmed with positive blood, CSF or pleural fluid cultures. PMID: 26057210 Source: Regenstrief LOINC

LP248177-0 Neisseria meningitidis serogroup Y synF gene
Neisseria meningitidis is identified based on the species-specific targets sodC and ctrA. Individual Neisseria meningitidis serogroups are identified based on their serogroup-specific genes for capsule biosynthesis. Serogroups and the genes that identify them are as follows:
N. meningitidis serogroup A: sacB
N. meningitidis serogroup B: synD
N. meningitidis serogroup C: synE
N. meningitidis serogroup w135: synG
N. meningitidis serogroup X: xcbB
N. meningitidis serogroup Y: synF
https://www.cdc.gov/meningitis/lab-manual/chpt10-pcr.html Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name: Neisseria meningitidis serogroup Y synF gene:ThreshNum:Pt:XXX:Qn:Probe.amp.tar
Long Common Name: Neisseria meningitidis serogroup Y synF gene [Cycle Threshold #] in Specimen by NAA with probe detection
Short Name: N men sg Y synF Ct Spec Qn NAA+probe
Display Name: N. meningitidis group Y synF gene NAA+probe (Specimen) [ThreshNum]
Consumer Name Alpha Get Info: Neisseria meningitidis serogroup Y synF gene, Specimen

Part Model Get Info

Component
Neisseria meningitidis serogroup Y synF gene
LP248177-0
- Analyte
  Neisseria meningitidis serogroup Y synF gene
  LP248177-0
  - Component Numerator
    Neisseria meningitidis serogroup Y synF gene
    LP248177-0
    - Component Numerator Core
      Neisseria meningitidis serogroup Y synF gene
      LP248177-0
    - Component Numerator Core Suffix
      NULL
  - Component Denominator
    NULL
    - Component Denominator Core
      NULL
    - Component Denominator Core Suffix
      NULL
- Challenge
  NULL
- Adjustment
  NULL
- Count
  NULL
Property
ThreshNum
LP188772-0
Time
Pt
LP6960-1
- Time Core
  Pt
  LP6960-1
- Time Modifier
  NULL
System
XXX
LP7735-6
- System Core
  XXX
  LP7735-6
- Super System
  NULL
Scale
Qn
LP7753-9
Method
Probe.amp.tar
LP6464-4

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.61
Last Updated: Version 2.69 (MIN)
Order vs. Observation: Observation

Member of these Panels

LOINC	Long Common Name
85797-9	Neisseria meningitidis serogroup DNA panel - Specimen by NAA with probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG41618-6	Neisseria meningitidis

Language Variants Get Info

Tag	Language	Translation
cs-CZ	Czech (Czechia)	Neisseria meningitidis séroskupina Y gen synF:Prahová hodnota:Časový bod:XXX:Kvantitativní:Amplifikace nukleových kyselin s detekcí sondou
de-DE	German (Germany)	Neisseria meningitidis Serogruppe Y synF-Gen:Ct-Wert:Zeitpunkt:XXX:Quantitativ:Zielfragmentamplifikation mit Sondendetektion
el-GR	Greek (Greece)	Neisseria meningitidis (Ναϊσσέρια της μηνιγγίτιδας) οροομάδα Y, γονίδιο synF:ThreshNum:Pt:XXX:Qn:Ανιχνευτής.ενίσχυση.στόχου Synonyms: MICRO Neisseria meningitidis (Ναϊσσέρια της μηνιγγίτιδας) οροομάδα Neisseria meningitidis (Ναϊσσέρια της μηνιγγίτιδας) οροομάδα Y Neisseria meningitidis (Ναϊσσέρια της μηνιγγίτιδας) οροομάδα Y, γονίδιο synF Pt Qn ThreshNum XXX Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Βακτήριο Neisseria meningitidis (Ναϊσσέρια μηνιγγίτιδας) Γονίδιο
es-MX	Spanish (Mexico)	Gen synF de Neisseria meningitidis serogrupo Y:ThreshNum:Punto temporal:XXX:Cuantitativo:Amplificación de ácidos nucleicos con detección de sonda
es-ES	Spanish (Spain)	Gen synF del serogrupo Y de Neisseria meningitidis:ThreshNnum:Punto temporal:XXX:Qn:Sonda con amplificación dirigida Synonyms: Cuantitativo
fr-FR	French (France)	Neisseria meningitidis sérogroupe Y gène synF:Cycle seuil:Ponctuel:Milieux divers:Numérique:PCR amplification de cible
it-IT	Italian (Italy)	Neisseria meningitidis sierogruppo Y, gene synF:Thresnum:Pt:XXX:Qn:Sonda.amp.tar Synonyms: Gene synF di Neisseria meningitidis sierogruppo Y Limite di soglia Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NL	Dutch (Netherlands)	Neisseria meningitidis serogroep Y synF-gen:drempelwaarde nummer:moment:XXX:kwantitatief:probe-detectie Synonyms: Neisseria meningitidis serogroep Y synF gen probe.amp.tar
pl-PL	Polish (Poland)	Neisseria meningitidis serogrupa Y synF gen:wartość progowa:punkt w czasie:XXX:ilościowy:sonda.amplifikacja.cel Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Dwoinka nagminnego zapalenia opon mózgowo-rdzeniowych;meningokok Gen synF Neisseria meningitidis serogrupa Y
zh-CN	Chinese (China)	脑膜炎奈瑟菌血清群 Y synF 基因:阈值循环圈数:时间点:XXX:定量型:探针法.基因扩增.靶向 Synonyms: 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向可用数量表示的;定量性;数值型;数量型;连续数值型标尺微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间流脑;流行性脑脊髓膜炎;脑膜炎双球菌;脑膜炎双球菌性脑膜炎;脑膜炎奈瑟氏双球菌;脑膜炎奈瑟氏球菌;脑膜炎奈瑟氏菌;脑膜炎球菌;脑膜炎球菌性脑膜炎界值数;界限数;阀值数;临界值数;阈值循环数;阈值数;达到阈值时的循环圈数;荧光信号到达设定阈值时所经历的循环数;Ct 值;Cycle threshold;循环阈值经过扩增的脑膜炎奈瑟菌 Y 群;脑膜炎奈瑟菌 Y 型脑膜炎奈瑟菌血清组;脑膜炎奈瑟菌血清型脱氧核糖核酸探针遗传基因;遗传因子;吉恩;生物基因

Example Units

Unit	Source
{Ct_value}	Example UCUM Units

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LOINC Copyright

Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.