86503-0

Deprecated Streptococcus pneumoniae serotype DNA [Identifier] in Unspecified specimen by NAA with probe detection

Deprecated

Status Information

Status: DEPRECATED
Reason: Duplicate
Comment: Duplicate

Map-To	Long Common Name	Mapping Guidance
85496-8	Streptococcus pneumoniae serotype [Identifier] in Specimen by NAA with probe detection	Duplicate

Part Description

LP253527-8 Streptococcus pneumoniae serotype
Streptococcus pneumoniae is an important human pathogen whose virulence is based primarily on its polysaccharide capsule, which protects it by shielding it from the immune system. Over time, study of the polysaccharide capsule has identified multiple serogroups and serotypes. Serotypes are defined based on the chemical structure and immunologic properties of the polysaccharide, and each serogroup contains one or more serotypes that elicit the same antibody response. Over time, two parallel serogroup and serotype naming systems arose, one in the U.S. and one in Denmark, but more recently, the Danish naming system is the one that has been widely adopted, including in the U.S. Beginning with the June 2017 release, LOINC adopted the Danish numbering system in the Component for all pneumococcal terms.
Out of more than 90 serotypes identified to date, only a third have been implicated in invasive disease, and there is also an association between specific serotypes, patient age, and mortality rate. For example, serotypes 1 and 5 are associated with invasive disease, and historically, serogroups 6, 14, 18, and 19 were more common among young children while serotype 3 was more common in the elderly. Vaccines have changed the prevalence of different serotypes and serogroups. Pneumococcal vaccines target the serotypes that are commonly implicated in human disease, and over time, the number of targeted serotypes have increased from 7 to 23. While widespread vaccination has significantly decreased the incidence of invasive pneumococcal disease caused by the serotypes covered by those vaccines, it has also caused a change in serotype prevalence in that strains that were rare are becoming more common. Therefore, determining the specific serotype responsible for new cases is important for epidemiologic tracking and future vaccine development.
PMID: 26085553 Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name: Streptococcus pneumoniae serotype DNA:ID:Pt:XXX:Nom:Probe.amp.tar
Long Common Name: Deprecated Streptococcus pneumoniae serotype DNA [Identifier] in Unspecified specimen by NAA with probe detection
Short Name: Deprecated S pneum serotype DNA XXX NAA+probe
Display Name: S. pneumoniae type DNA NAA+probe (Specimen) [ID]
Consumer Name Alpha Get Info: Streptococcus pneumoniae serotype, Specimen

Part Model Get Info

Component
Streptococcus pneumoniae serotype DNA
LP248025-1
- Analyte
  Streptococcus pneumoniae serotype DNA
  LP248025-1
  - Component Numerator
    Streptococcus pneumoniae serotype DNA
    LP248025-1
    - Component Numerator Core
      Streptococcus pneumoniae serotype
      LP249323-9
    - Component Numerator Core Suffix
      DNA
      LP32416-7
  - Component Denominator
    NULL
    - Component Denominator Core
      NULL
    - Component Denominator Core Suffix
      NULL
- Challenge
  NULL
- Adjustment
  NULL
- Count
  NULL
Property
ID
LP6818-1
Time
Pt
LP6960-1
- Time Core
  Pt
  LP6960-1
- Time Modifier
  NULL
System
XXX
LP7735-6
- System Core
  XXX
  LP7735-6
- Super System
  NULL
Scale
Nom
LP7750-5
Method
Probe.amp.tar
LP6464-4

Example Answer List: LL4419-9

Source: Regenstrief LOINC

Answer	Code	Score	Answer ID
Streptococcus pneumoniae Danish serotype 1			LA27117-3
Streptococcus pneumoniae Danish serotype 2			LA27118-1
Streptococcus pneumoniae Danish serotype 5			LA27121-5
Streptococcus pneumoniae Danish serotype 9			LA27291-6
Streptococcus pneumoniae Danish serotype 24			LA27292-4

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.61
Last Updated: Version 2.72 (MIN)
Order vs. Observation: Both

Language Variants Get Info

Tag	Language	Translation
cs-CZ	Czech (Czechia)	Streptococcus pneumoniae sérotyp DNA:Identifikátor:Časový bod:XXX:Nominální:Amplifikace nukleových kyselin s detekcí sondou
el-GR	Greek (Greece)	Streptococcus pneumoniae (Στρεπτόκοκκος πνευμονίας) ορότυπος DNA:Αναγνωριστικό:Pt:XXX:Nom:Ανιχνευτής.ενίσχυση.στόχου Synonyms: DNA MICRO Nom Pt Streptococcus pneumoniae (Στρεπτόκοκκος πνευμονίας) Streptococcus pneumoniae (Στρεπτόκοκκος πνευμονίας) ορότυπος XXX Αναγνωριστικό Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου
es-ES	Spanish (Spain)	Streptococo pneumoniae serotipo ADN:Código identificador:Punto temporal:XXX:Nom:Sonda con amplificación dirigida
es-MX	Spanish (Mexico)	ADN del serotipo de Streptococo pneumoniae:Identificador:Punto temporal:XXX:Nominal:Amplificación de ácidos nucleicos con detección de sonda
fr-CA	French (Canada)	Streptococcus pneumoniae Sérotype, ADN:Identifiant:Temps ponctuel:XXX:Nominal:Sonde avec amplification de la cible
fr-FR	French (France)	Streptococcus pneumoniae sérotype ADN:Identifiant:Ponctuel:Milieux divers:Résultat nominal:PCR amplification de cible
it-IT	Italian (Italy)	Streptococcus pneumoniae, sierotipo DNA:ID:Pt:XXX:Nom:Sonda.amp.tar Synonyms: Identificatore Microbiologia Punto nel tempo (episodio) Sierotipo Streptococcus pneumoniae Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NL	Dutch (Netherlands)	Streptococcus pneumoniae serotype DNA:identificator:moment:XXX:nominaal:probe-detectie Synonyms: probe.amp.tar
pl-PL	Polish (Poland)	Streptococcus pneumoniae serotyp DNA:identyfikator:punkt w czasie:XXX:skala nominalna:sonda.amplifikacja.cel Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Dwoinka zapalenia płuc;pneumokok Kwas deoksyrybonukleinowy Serotyp Streptococcus pneumoniae wynik kategorialny
zh-CN	Chinese (China)	肺炎链球菌血清型 DNA:标识符:时间点:XXX:名义型:探针法.基因扩增.靶向 Synonyms: 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向分类型应答;分类型结果;名义性;名称型;名词型;名词性;标称性;没有自然次序的名义型或分类型应答去氧核糖核酸;脱氧核糖核酸去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间标识;身份标识符;身份标识球菌肺炎;肺双;肺炎双球菌;肺炎球菌;肺链;链球菌肺炎经过扩增的肺炎链球菌（肺炎球菌）血清型脱氧核糖核酸探针

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CodeSystem lookup: https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=86503-0

LOINC Copyright

Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.