LOINC
Version 2.67

86690-5Rotavirus C RNA [Presence] in Unspecified specimen by NAA with probe detectionActive

Term Description

Sample types for this test include porcine feces and fecal swabs, intestinal tissue and environmental swabs.
Source: Regenstrief LOINC

Part Description

LP248334-7   Rotavirus C
Rotaviruses are non-enveloped, multilayered, icosahedral viruses composed of an outer layer, an inner layer, and a core. After the immature, double-layered virus is assembled in the host cell cytoplasm, they bud across the endoplasmic reticulum (ER) and acquire a temporary membrane that has on its surface the ER resident viral glycoproteins NSP4, VP4 and VP7. The virus loses its temporary membrane and the NSP4 glycoprotein as it moves toward the center of the ER cisternae. The VP4 and VP7 proteins are pushed to the outermost membrane layer and become the mature triple-layered rotavirus. The outer capsid glycoprotein VP7 is believed to be important for the attachment to and entry in the host cell. After it enters the host cell, the VP7 glycoprotein is lost. [UniProt: Q89865] When the host cell lyses, the mature virus are released. There are eight groups of rotavirus, A through H. Groups A, B, C, and H are associated with an acute gastroenteritis and are found in humans and animals. Groups D, E, F, and G are found only in animals. Rotavirus C has been the cause of periodic outbreaks of infection in piglets, children, and adults, resulting in gastroenteritis and death. Group C rotavirus were initially discovered in the 1980s in swine, but were later identified in humans, cows, ferrets, and dogs. [PMID: 2556635] [http://www.sciencedirect.com/science/article/pii/S004268220700400X?via%3Dihub] Source: Regenstrief LOINC

Fully-Specified Name

Component
Rotavirus C RNA
Property
PrThr
Time
Pt
System
XXX
Scale
Ord
Method
Probe.amp.tar

Additional Names

Short Name
RVC RNA XXX Ql NAA+probe
Display Name
Rotavirus C RNA NAA+probe Ql (Unsp spec)

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.61
Last Updated
Version 2.63
Order vs. Observation
Observation

Example Answer List LL360-9

Source: Regenstrief Institute

Answer Code Score Answer ID
Positive Copyright http://snomed.info/sct ID:10828004 Positive (qualifier value) LA6576-8
Negative Copyright http://snomed.info/sct ID:260385009 Negative (qualifier value) LA6577-6

Language Variants Get Info

zh-CNChinese (CHINA)
轮状病毒 C RNA:存在情况或阈值:时间点:XXX:序数型:探针法.基因扩增.靶向
nl-NLDutch (NETHERLANDS)
Rotavirus C RNA:aanwezigheid:moment:XXX:ordinaal:moleculaire techniek (PCR)
fr-FRFrench (FRANCE)
Rotavirus C ARN:Présence/Seuil:Ponctuel:Milieux divers:Qualitatif:PCR amplification de cible
it-ITItalian (ITALY)
Rotavirus C , RNA:PrThr:Pt:XXX:Ord:Sonda.amp.tar
es-ESSpanish (SPAIN)
Rotavirus C RNA:PrThr:Punto temporal:XXX:Ord:Sonda con amplificación dirigida

LOINC FHIR® API Example - CodeSystem Request Get Info

https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=86690-5