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Part Description

LP262464-3   Escherichia coli FimF41a gene
The Escherichia coli (EC) pilus gene FimF41a encodes the F41 fimbria. The F41 fimbria is one of the virulence factors associated with postweaning diarrhea (PWD) only in swine.https://www.aasv.org/shap/issues/v10n4/v10n4p171.pdfEC is a gram-negative, flagellated, rod-shaped bacterium that is composed of a stable core set of genes, and another more fluid set of genes that includes the virulence genes. These virulence genes increase the pathogenicity of EC and encode heat-stable and heat-labile enterotoxins, Shiga toxin 2e, and fimbria, including the F41 fimbria. The virulence genes can be transferred laterally between dividing EC. PMID: 7021219https://vetmed.iastate.edu/vdpam/FSVD/swine/index-diseases/colibacillosis E. coli infection in pigs causes post-weaning diarrhea (PWD) which leads to watery diarrhea, dehydration, loss of body weight, and occasionally death. EC adheres to the small intestine using adhesin factors, and produces one or more exotoxins that induce fluid and electrolyte secretion. PMID: 7648523 Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name
Escherichia coli FimF41a gene:PrThr:Pt:Isolate:Ord:Probe.amp.tar
Long Common Name
Escherichia coli FimF41a gene [Presence] in Isolate by NAA with probe detection
Short Name
EC FimF41a gene Islt Ql NAA+probe
Display Name
E. coli FimF41a gene NAA+probe Ql (Isol)
Consumer Name Alpha Get Info
Escherichia coli FimF41a gene

Part Model Get Info

  • Component
    Escherichia coli FimF41a gene
    LP262464-3
    • Analyte
      Escherichia coli FimF41a gene
      LP262464-3
      • Component Numerator
        Escherichia coli FimF41a gene
        LP262464-3
        • Component Numerator Core
          Escherichia coli FimF41a gene
          LP262464-3
        • Component Numerator Core Suffix
          NULL
           
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    PrThr
    LP217195-9
  • Time
    Pt
    LP6960-1
  • System
    Isolate
    LP7370-2
    • System Core
      Isolate
      LP7370-2
    • Super System
      NULL
       
  • Scale
    Ord
    LP7751-3
  • Method
    Probe.amp.tar
    LP6464-4

Example Answer List: LL360-9

Source: Regenstrief Institute
AnswerCodeScoreAnswer ID
PositiveCopyright http://snomed.info/sct ID:10828004 Positive (qualifier value)LA6576-8
NegativeCopyright http://snomed.info/sct ID:260385009 Negative (qualifier value)LA6577-6

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.63
Last Updated
Version 2.63 (ADD)
Order vs. Observation
Both

Member of these Panels

LOINCLong Common Name
88116-9Escherichia coli gene panel - Specimen by NAA with probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Escherichia coli gen FimF41a:Přítomnost nebo práh:Časový bod:Izolát:Ordinální:Amplifikace nukleových kyselin s detekcí sondou
el-GRGreek (Greece)Γονίδιο FimF41a του Escherichia coli (κολοβακτηρίδιο):PrThr:Pt:Απομονωμένο στέλεχος:Ord:Ανιχνευτής.ενίσχυση.στόχου
Synonyms: Escherichia coli (Κολοβακτηρίδιο) MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Απομονωμένο στέλεχος Γονίδιο Γονίδιο FimF41a του Escherichia coli (κολοβακτηρίδιο)
es-ESSpanish (Spain)Gen FimF41a Escherichia coli:PrThr:Punto temporal:Aislado:Ord:Sonda con amplificación dirigida
es-MXSpanish (Mexico)Gen de Escherichia coli FimF41a:Presencia o umbral:Punto temporal:Aislado:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-FRFrench (France)Escherichia coli gène FimF41a:Présence/Seuil:Ponctuel:Isolat:Qualitatif:PCR amplification de cible
it-ITItalian (Italy)Escherichia coli gene FimF41a:PrThr:Pt:Isolato:Ord:Sonda.amp.tar
Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NLDutch (Netherlands)Escherichia coli fedF-gen:aanwezigheid:moment:isolaat:ordinaal:probe-detectie
Synonyms: probe.amp.tar
pl-PLPolish (Poland)Escherichia coli FimF41a gen:granica wykrywalności:punkt w czasie:izolat:uporządkowany:sonda.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Gen FimF41a Escherichia coli
zh-CNChinese (China)大肠埃希菌 FimF41a 基因:存在情况或阈值:时间点:分离株:序数型:探针法.基因扩增.靶向
Synonyms: E coli;大肠埃希氏杆菌;大肠埃希氏菌;大肠杆菌 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 分离物;分离菌;分离菌株;隔离种群 大肠埃希菌（E coli、大肠埃希氏杆菌、大肠埃希氏菌、大肠杆菌） FimF41a 基因 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 经过扩增的 脱氧核糖核酸探针 遗传基因;遗传因子;吉恩;生物基因

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=87372-9