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Term Description

Specimens may include tissue, oral fluids, and fecal and environmental specimens.

Part Description

LP16750-9   Salmonella sp
Salmonella are gram-negative, flagellated, facultative intracellular, anaerobic bacilli with O, H and Vi surface antigens. Once ingested, Salmonella survives the gastric acid barrier and penetrates the epithelial cells of the small and large intestines. The invasion of the epithelial cells stimulates the release of cytokines and a subsequent inflammatory response leading to diarrhea and possible ulceration of the mucosa.[NCBI Books: 8435] Antibodies to Salmonella are the body's defense when the bacteria is outside of its host cell which occurs at the initial infection and when the bacillus moves from cell to cell. There is a 10 minute window of opportunity when the Salmonella bacillus leaves the macrophage to invade another. During that time, antibodies and complement work to eradicate the bacilli, but some of the extracellular bacilli will evade attack and enter another host cell. Studies have shown that vaccines play an important role in the fight against typhoid fever. PMID: 25566248 There are two species of Salmonella: S. enterica and S. bongori. These species can be further subclassified into subspecies and serovars.

Veterinary Medicine:
Salmonella infection is most often caused by the serovars Salmonella choleraesuis, and Salmonella typhimurium and less often by Salmonella derby. Infected pigs can be asymptomatic and become carriers of S. choleraesius. Typically, the bacteria survive in the mesenteric lymph nodes that drain into the intestines, and are not shed in the feces unless the pig is under stress. The carrier state lasts for weeks to months and is self-limiting. Severe infection with S. choleraesius can be serious starting out as septicemia and progressing to pneumonia and enteritis. The infection can spread to various tissues including to the central nervous system leading to meningitis and to the joints where it manifests as arthritis. Severe infections with S. choleraesius occurs at any age, but most often in pigs 12-14 weeks of age.http://www.thepigsite.com/pighealth/article/357/salmonellosis/ Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name
Salmonella sp DNA:ThreshNum:Pt:XXX:Qn:Probe.amp.tar
Long Common Name
Salmonella sp DNA [Cycle Threshold #] in Specimen by NAA with probe detection
Short Name
Salmonella DNA Ct Spec Qn NAA+probe
Display Name
Salmonella sp DNA NAA+probe (Specimen) [ThreshNum]
Consumer Name Alpha Get Info
Salmonella sp, Specimen

Part Model Get Info

  • Component
    Salmonella sp DNA
    LP64712-0
    • Analyte
      Salmonella sp DNA
      LP64712-0
      • Component Numerator
        Salmonella sp DNA
        LP64712-0
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    ThreshNum
    LP188772-0
  • Time
    Pt
    LP6960-1
  • System
    XXX
    LP7735-6
    • System Core
      XXX
      LP7735-6
    • Super System
      NULL
       
  • Scale
    Qn
    LP7753-9
  • Method
    Probe.amp.tar
    LP6464-4

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.63
Last Updated
Version 2.69 (MIN)
Order vs. Observation
Both

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Salmonella sp DNA:Prahová hodnota:Časový bod:XXX:Kvantitativní:Amplifikace nukleových kyselin s detekcí sondou
de-DEGerman (Germany)Salmonella sp DNA:Ct-Wert:Zeitpunkt:XXX:Quantitativ:Zielfragmentamplifikation mit Sondendetektion
el-GRGreek (Greece)Βακτήριο Salmonella sp DNA:ThreshNum:Pt:XXX:Qn:Ανιχνευτής.ενίσχυση.στόχου
Synonyms: DNA MICRO Pt Qn ThreshNum XXX Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Βακτήριο Salmonella sp
es-ESSpanish (Spain)Salmonella sp ADN:ThreshNnum:Punto temporal:XXX:Qn:Sonda con amplificación dirigida
Synonyms: Cuantitativo
es-MXSpanish (Mexico)ADN de Salmonella sp:ThreshNum:Punto temporal:XXX:Cuantitativo:Amplificación de ácidos nucleicos con detección de sonda
fr-FRFrench (France)Salmonella ADN:Cycle seuil:Ponctuel:Milieux divers:Numérique:PCR amplification de cible
it-ITItalian (Italy)Salmonella sp DNA:Thresnum:Pt:XXX:Qn:Sonda.amp.tar
Synonyms: Limite di soglia Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NLDutch (Netherlands)Salmonella sp. DNA:drempelwaarde nummer:moment:XXX:kwantitatief:probe-detectie
Synonyms: probe.amp.tar
pl-PLPolish (Poland)Salmonella sp DNA:wartość progowa:punkt w czasie:XXX:ilościowy:sonda.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Kwas deoksyrybonukleinowy
tr-TRTurkish (Turkey)Salmonella sp DNA:EşikDeğ:Zmlı:XXX:Kant:Prob.amf.hdf
Synonyms: Eşik Değer
zh-CNChinese (China)沙门菌属单个未知种 DNA:阈值循环圈数:时间点:XXX:定量型:探针法.基因扩增.靶向
Synonyms: 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 可用数量表示的;定量性;数值型;数量型;连续数值型标尺 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 沙门氏菌 DNA 沙门氏菌;沙门氏菌属;沙门菌;沙门菌单个未知种 沙门氏菌属 沙门菌 DNA 沙门菌属 DNA 物种 生物种 界值数;界限数;阀值数;临界值数;阈值循环数;阈值数;达到阈值时的循环圈数;荧光信号到达设定阈值时所经历的循环数;Ct 值;Cycle threshold;循环阈值 经过扩增的 脱氧核糖核酸探针

Example Units

UnitSource
{Ct_value}Example UCUM Units

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=87394-3