Version 2.78

Part Descriptions

LP150045-5   Sequencing
Sequencing is a method used to determine the sequence of individual genes, larger genetic regions (i.e. clusters of genes or operons), full chromosomes or entire genomes. Historically, most sequencing has been performed using the chain termination method developed by Frederick Sanger in 1977. PMID: 271968 Sequencing technologies have improved dramatically, making them cheaper, faster, and more accurate. Next-generation sequencing (NGS), also known as high-throughput sequencing, deep sequencing, and second-generation sequencing, is a type of technology that uses parallel sequencing of multiple small fragments of DNA to determine sequence. This "high-throughput" technology has increased the speed and amount of DNA sequenced at a significantly reduced cost. PMID: 18576944 Several NGS platforms (ie, sequencing instruments and associated reagents) have been developed. Third-generation sequencing is another methodology currently under development that uses parallel sequencing similar to NGS. In contrast to NGS, third-generation sequencing uses single DNA molecules rather than amplified DNA as a template. PMID: 20858600 Source: Regenstrief LOINC

LP263481-6   Influenza virus A NA gene
The influenza A virus (FLUAV) is a common respiratory virus that infects humans as well as birds, horses, seals, dogs, and pigs. There are eight gene segments that make up the negative single-stranded RNA of the FLUAV. The gene segments are known as PB1, PB2, PA, NP, HA, NA, M, and NS. Hemagglutinin (HA) and neuraminidase (NA) have high antigenic variation and are the two glycoproteins on the FLUAV surface that designate its subtype. The subtypes of FLUAV that are currently found within the human population are H1N1 and H3N2. HA and NA subtypes are preserved in the avian species and comprise the pool of virus from which all mammalian FLUAV are drawn. [https://virologyj.biomedcentral.com/articles/10.1186/1743-422X-6-67] Antigenic shift is defined as important antigenic modifications in the HA and/or NA subtype within the human population. Pigs contribute to these antigenic shifts because their trachea contain receptors to both avian and human influenza viruses. The avian and human viruses within the pig trachea replicate in close proximity to one another, and are able to exchange genetic material and thereby create new strains of virus.[http://www.clinlabnavigator.com/influenza-virus-subtypes.html] Source: Regenstrief LOINC

Fully-Specified Name

Component
Influenza virus A NA gene
Property
Seq
Time
Pt
System
Isolate
Scale
Nom
Method
Sequencing

Additional Names

Short Name
FLUAV NA gene Islt-Seq
Display Name
FLUAV NA gene sequence Nom (Isol)
Consumer Name Alpha Get Info
Influenza A NA gene

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.63
Last Updated
Version 2.63
Order vs. Observation
Both

Member of these Groups Get Info

LOINC Group Group Name
LG32757-3 Influenza virus

Language Variants Get Info

Tag Language Translation
de-DE German (Germany) Influenza-Virus A NA-Gen:Sequenz:Zeitpunkt:Isolat:Nominal:Sequenzierung
es-ES Spanish (Spain) Gen NA virus Influenza A:Secuencia de nucleótidos:Punto temporal:Aislado:Nom:Secuenciación
es-MX Spanish (Mexico) Gen NA del virus de la influenza A:Secuencia de nucleótidos:Punto temporal:Aislado:Nominal:Secuenciación
fr-FR French (France) Influenza virus A gène NA:Séquence nucléotidique:Ponctuel:Isolat:Résultat nominal:Séquençage
it-IT Italian (Italy) Influenza virus A NA, gene:Seq:Pt:Isolato:Nom:Sequenziamento
Synonyms: Gene virus dell''influenza A NA Microbiologia Punto nel tempo (episodio) Sequenza nucleotidica Virus dell''influenza Virus dell''influenza A
nl-NL Dutch (Netherlands) Influenzavirus A NA-gen:nucleotidevolgorde:moment:isolaat:nominaal:sequencing
pl-PL Polish (Poland) Influenza wirus A gen neuraminidazy:sekwencja nukleotydu:punkt w czasie:izolat:cecha:sekwencjonowanie
Synonyms: Gen neuroaminidazy wirusa grypy typu A Wirus grypy Wirus grypy typ A
zh-CN Chinese (China) 流感病毒 A 型神经氨酸酶基因:序列:时间点:分离株:名义型:序列测定
Synonyms: A 型 A 型流感;A 型流感病毒;FLUA;FLUAV;家禽鼠疫;流感 A;流感 A 型;流感甲型;流感病毒甲型;甲型流感;甲型流感病毒;瘟疫;禽流感;禽流行性感冒;禽疫;鸡瘟 A 型流感病毒神经氨酸酶基因;FLUA NA 基因;FLUA 神经氨酸酶基因;FLUAV NA 基因;FLUAV 神经氨酸酶基因;流感病毒甲型神经氨酸酶基因;甲型流感病毒神经氨酸酶基因 FLUV;Influ;列性感冒病毒;流行性感冒病毒 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体 分离物;分离菌;分离菌株;隔离种群 分类型应答;分类型结果;名义性;名称型;名词型;名词性;标称性;没有自然次序的名义型或分类型应答 序列分析;测序 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 时刻;随机;随意;瞬间 核苷酸序列 遗传基因;遗传因子;吉恩;生物基因

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=87716-7