96319-9

Escherichia coli DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection

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Part Description

LP19605-2 Escherichia coli
Escherichia coli (EC) is a gram-negative, flagellated, rod-shaped bacterium. https://vetmed.iastate.edu/vdpam/FSVD/swine/index-diseases/colibacillosis The human gastrointestinal (GI) tract is colonized by EC within hours of birth. The natural barriers of the GI tract prevent infection by symbiotic EC except when they break down such as in peritonitis. EC occupy the mucous layer of the mammalian colon and is the most numerous anaerobe of the intestinal microflora. Some strains of EC have evolved virulence factors that precipitate serious disease including enteric diarrhea, urinary tract infections, sepsis and meningitis. The intestinal pathogens of EC include six pathotypes defined by the virulence factors they express. These include: enteropathogenic E. coli (EPEC), enterohaemorrhagic E. coli(EHEC), enterotoxigenic E. coli (ETEC), enteroaggregative E. coli (EAEC), enteroinvasive E. coli (EIEC) and diffusely adherent E. coli (DAEC). Uropathogenic EC (UPEC) is the most common EC infection that occurs outside the GI tract. The EC pathotypes that infects extraintestinal locations have been designated ExPEC. The EC pathotypes that infect animals and cause disease include EPEC, EHEC and ETEC.[nature.com/nrmicro/journal/v2/n2/full/nrmicro818.html][vetres.org/articles/vetres/pdf/2006/01/v6008.pdf] Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name: Escherichia coli DNA:NCncRange:Pt:Respiratory system specimen.lower:SemiQn:Non-probe.amp.tar
Long Common Name: Escherichia coli DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Short Name: E coli DNA L resp NAA+non-prb-NCncRng
Display Name: E. coli DNA NAA+non-probe (Lower resp) [NCncRange]
Consumer Name Alpha Get Info: Escherichia coli, Lower respiratory

Part Model Get Info

Component
Escherichia coli DNA
LP102592-5
- Analyte
  Escherichia coli DNA
  LP102592-5
  - Component Numerator
    Escherichia coli DNA
    LP102592-5
    - Component Numerator Core
      Escherichia coli
      LP19605-2
    - Component Numerator Core Suffix
      DNA
      LP32416-7
  - Component Denominator
    NULL
    - Component Denominator Core
      NULL
    - Component Denominator Core Suffix
      NULL
- Challenge
  NULL
- Adjustment
  NULL
- Count
  NULL
Property
NCncRange
LP345057-6
Time
Pt
LP6960-1
- Time Core
  Pt
  LP6960-1
- Time Modifier
  NULL
System
Respiratory system specimen.lower
LP438102-8
- System Core
  Respiratory system specimen.lower
  LP438102-8
- Super System
  NULL
Scale
SemiQn
LP436123-6
Method
Non-probe.amp.tar
LP208998-7

Example Answer List: LL5239-0

Source: BioFire Diagnostics LLC

Answer	Code	Score	Answer ID
<10^3.5 copies/mL			LA30121-0
10^3.5 - <10^4.5 copies/mL			LA29765-7
10^4.5 - <10^5.5 copies/mL			LA29766-5
10^5.5 - <10^6.5 copies/mL			LA29767-3
10^6.5 - <10^7.5 copies/mL			LA29768-1
>=10^7.5 copies/mL			LA30120-2

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.69
Last Updated: Version 2.77 (MAJ)
Change Reason: Release 2.77: SYSTEM: Updated to standardize the representation of "Respiratory system specimen" in the System subhierarchy across LOINC;
Order vs. Observation: Both

Member of these Panels

LOINC	Long Common Name
92958-8	Respiratory pathogens DNA and RNA panel - Lower respiratory specimen by NAA with non-probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG50892-5	Escherichia coli DNA\|NCncRange\|Sys:ANYResp

Language Variants Get Info

Tag	Language	Translation
cs-CZ	Czech (Czechia)	Escherichia coli DNA:Rozsah početní koncentrace:Časový bod:Vzorek dolních cest dýchacích:Semikvantitativní:Amplifikace nukleových kyselin s detekcí bez sondy
de-AT	German (Austria)	Synonyms: Escherichia coli DNA ql. /RT
el-GR	Greek (Greece)	Escherichia coli (Κολοβακτηρίδιο) DNA:NCncRange:Pt:Δείγμα αναπνευστικού συστήματος.κατώτερο:Ημιποσοτική:Χωρίς ανιχνευτή.ενίσχυση.στόχου Synonyms: DNA Escherichia coli (Κολοβακτηρίδιο) MICRO NCncRange Pt Αναπνευστικό Αναπνευστικό σύστημα Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Δείγμα Δείγμα αναπνευστικού συστήματος Δείγμα αναπνευστικού συστήματος.κατώτερο Ημιποσοτική Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ES	Spanish (Spain)	Escherichia coli ADN:Rango NCnc:Punto temporal:Muestra de vías respiratorias inferiores:Semicuantitativo:Amplificación del objetivo no basado en sonda Synonyms: Muestra del tracto respiratorio Muestra respiratoria Semicuantitativo Tracto respiratorio
es-MX	Spanish (Mexico)	ADN de Escherichia coli:NCncRange:Punto temporal:Muestra de vías respiratorias inferiores:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-FR	French (France)	Escherichia coli ADN:Nombre/Volume (Valeurs de référence):Ponctuel:Échantillon du système respiratoire inférieur:Semi-Quantitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Escherichia coli DNA:NCncRange:Pt:Campione da Sistema Respiratorio.inferiore:SemiQn:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda Campione da Apparato Respiratorio Campione da apparato respiratorio inferiore Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PL	Polish (Poland)	Escherichia coli DNA:zakres stężenia liczbowego:punkt w czasie:próbka z układu oddechowego.dolna część:półilościowy:bez sondy.amplifikacja.cel Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Kwas deoksyrybonukleinowy próbka z dolnych dróg układu oddechowego zakres stężenia liczbowego (liczba lub objętość)
zh-CN	Chinese (China)	大肠埃希菌 DNA:计数型浓度范围:时间点:呼吸系统标本.下:半定量型:非探针法.基因扩增.靶向 Synonyms: E coli;大肠埃希氏杆菌;大肠埃希氏菌;大肠杆菌 NCncRange;计数型浓度（单位体积内的数量或计数、数量型浓度(单位体积)、数量或计数型浓度(计数/体积)、数量或计数型浓度(单位体积)、计数型浓度(单位体积)）范围（值域、区间、界限）下下的下部低级低级的供检查用的材料;待检物;待试验物;样品;样本;试料;试样借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向去氧核糖核酸;脱氧核糖核酸去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA）受检物呼吸系统（呼吸道）标本.下;下呼吸系统标本;下呼吸道标本呼吸道标本（样品、样本）;呼吸系统标本（样品、样本）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间样品样本经过扩增的脱氧核糖核酸探针试样较低较低的

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LOINC Copyright

Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.