Version 2.77

Term Description

SARS coronavirus 2 (SARS-CoV-2) clade assignment may be based on either the Nextstrain application [] or GISAID [].
Source: Regenstrief LOINC

Part Description

LP422736-1   SARS coronavirus 2 clade
Clade nomenclatures aim at providing a broad-brush categorization of globally circulating diversity of SARS-CoV-2. PMID: 32794443 One example of a Clade nomenclature is the based on year followed by a letter ( These are meant to be major groupings and not intended to completely specify genetic diversity. In general, new clades are proposed when certain criteria are met, for example reaching a frequency of 20% globally with at least two mutations away from its parent clade.[] Source: Regenstrief LOINC

Reference Information

Type Source Reference
Webcontent Lab Tests Online®Copyright Copyright © 2021 Lab Tests Online. All rights reserved. Coronavirus (COVID-19) Testing

Fully-Specified Name

SARS coronavirus 2 clade

Additional Names

Short Name
SARS-CoV-2 clade Spec
Display Name
SARS-CoV-2 (COVID-19) clade Molgen Nom (Specimen)
Consumer Name Alpha Get Info
SARS-CoV-2 (COVID-19) clade, Specimen

Example Answer List: LL5806-6

Source: LOINC
Answer Code Score Answer ID
SARS-CoV-2 clade 19A LA31687-9
SARS-CoV-2 clade 19B LA31688-7
SARS-CoV-2 clade 20A LA31689-5
SARS-CoV-2 clade 20B LA31690-3
SARS-CoV-2 clade 20C LA31691-1
SARS-CoV-2 clade 20D LA31692-9
SARS-CoV-2 clade 20E LA31693-7
SARS-CoV-2 clade 20F LA31694-5
SARS-CoV-2 clade 20G LA31695-2
SARS-CoV-2 clade 20H LA31696-0
SARS-CoV-2 clade 20I LA31697-8
SARS-CoV-2 clade 20J LA31698-6

Basic Attributes

First Released
Version 2.70
Last Updated
Version 2.72
Order vs. Observation

Member of these Panels

LOINC Long Common Name
96894-1 SARS-CoV-2 (COVID-19) sequencing and identification panel - Specimen by Molecular genetics method

Member of these Groups Get Info

LOINC Group Group Name
LG51017-8 SARSCoV2 detection

Language Variants Get Info

Tag Language Translation
de-DE German (Germany) SARS-Coronavirus 2 Klade:Typ:Zeitpunkt:XXX:Nominal:Molekulargenetisch
es-ES Spanish (Spain) Clado de SARS-CoV-2 (COVID-19):Tipo:Punto temporal:XXX:Nom:Genética molecular
es-MX Spanish (Mexico) SARS coronavirus 2 clado:Escribe:Punto temporal:No especificado:Nominal:Molgen
fr-FR French (France) Coronavirus SARS-CoV-2 clade:Type:Ponctuel:Milieux divers:Résultat nominal:Biologie moléculaire
it-IT Italian (Italy) SARS coronavirus 2 clade:Tipo:Pt:XXX:Nom:Molgen
Synonyms: Coronavirus della SARS Genetica molecolare Microbiologia Punto nel tempo (episodio) SARS-CoV-2 (COVID-19) SARS-CoV-2 (COVID-19) clade
nl-NL Dutch (Netherlands) SARS-CoV-2 clade:type:moment:XXX:nominaal:moleculair genetisch onderzoek
Synonyms: molgen SARS-virus severe acute respiratory syndrome coronavirus 2; 2019-nCoV; 2019 novel coronavirus; COVID-19
pl-PL Polish (Poland) Klad SARS-CoV-2:typ:punkt w czasie:XXX:cecha:genetyka molekularna
Synonyms: Koronawirus
zh-CN Chinese (China) SARS 冠状病毒 2 进化枝:类型:时间点:XXX:名义型:分子遗传学类实验室方法
Synonyms: 2019 新型冠状病毒;2019 年新型冠状病毒;2019-nCoV;SARS-CoV-2;新型冠状病毒肺炎;新冠肺炎;Coronavirus disease 2019;COVID-19;冠状病毒疾病2019;严重急性呼吸综合征;severe acute respiratory syndrome;SARS;传染性非典型肺炎;infectious atypical pneumonia;非典 Ⅱ II SARS 冠状病毒 2 进化枝(分支、支、支系、分枝、分化体、种系分枝、演化支);2019 新型冠状病毒;2019 年新型冠状病毒;2019-nCoV;SARS-CoV-2;新型冠状病毒肺炎;新冠肺炎;Coronavirus disease 2019;COVID-19;冠状病毒疾病2019;严重急性呼吸综合征;severe acute respiratory syndrome;SARS;传染性非典型肺炎;infectious atypical pneumonia;非典 SARS;SARS 病毒;SARS-CoV;严重急性呼吸综合征;严重急性呼吸综合征病毒;萨斯病毒;非典;非典型肺炎;非典型肺炎病毒;非典病毒 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 分子遗传学;分子遗传学方法;分子遗传学类方法;分子遗传学类检验方法;包括 RFL、PCR 及其他方法在内,用于在分子基础上检测遗传属性的方法的大类;聚合酶链反应;聚合酶链式反应 分类型应答;分类型结果;名义性;名称型;名词型;名词性;标称性;没有自然次序的名义型或分类型应答 型 微生物学;微生物学试验;微生物学试验(培养、DNA、抗原及抗体) 时刻;随机;随意;瞬间

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