96896-6
SARS-CoV-2 (COVID-19) clade [Type] in Specimen by Molecular genetics method
Active
Term Description
SARS coronavirus 2 (SARS-CoV-2) clade assignment may be based on either the Nextstrain application [https://clades.nextstrain.org] or GISAID [https://www.gisaid.org/].
Source: Regenstrief LOINC
Part Description
LP422736-1 SARS coronavirus 2 clade
Clade nomenclatures aim at providing a broad-brush categorization of globally circulating diversity of SARS-CoV-2. PMID: 32794443 One example of a Clade nomenclature is the based on year followed by a letter (Nextstrain.org). These are meant to be major groupings and not intended to completely specify genetic diversity. In general, new clades are proposed when certain criteria are met, for example reaching a frequency of 20% globally with at least two mutations away from its parent clade.[https://virological.org/t/year-letter-genetic-clade-naming-for-sars-cov-2-on-nextstrain-org/498]
Source: Regenstrief LOINC
Reference Information
| Type | Source | Reference |
|---|---|---|
| Webcontent | Lab Tests Online®Copyright Copyright © 2021 Lab Tests Online. All rights reserved. | Coronavirus (COVID-19) Testing |
Fully-Specified Name
- Component
- SARS coronavirus 2 clade
- Property
- Type
- Time
- Pt
- System
- XXX
- Scale
- Nom
- Method
- Molgen
Additional Names
- Short Name
- SARS-CoV-2 clade Spec
- Display Name
- SARS-CoV-2 (COVID-19) clade Molgen Nom (Specimen)
- Consumer Name Alpha Get Info
- SARS-CoV-2 (COVID-19) clade, Specimen
Example Answer List: LL5806-6
Source: LOINC| Answer | Code | Score | Answer ID |
|---|---|---|---|
| SARS-CoV-2 clade 19A | LA31687-9 | ||
| SARS-CoV-2 clade 19B | LA31688-7 | ||
| SARS-CoV-2 clade 20A | LA31689-5 | ||
| SARS-CoV-2 clade 20B | LA31690-3 | ||
| SARS-CoV-2 clade 20C | LA31691-1 | ||
| SARS-CoV-2 clade 20D | LA31692-9 | ||
| SARS-CoV-2 clade 20E | LA31693-7 | ||
| SARS-CoV-2 clade 20F | LA31694-5 | ||
| SARS-CoV-2 clade 20G | LA31695-2 | ||
| SARS-CoV-2 clade 20H | LA31696-0 | ||
| SARS-CoV-2 clade 20I | LA31697-8 | ||
| SARS-CoV-2 clade 20J | LA31698-6 |
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.72
- Order vs. Observation
- Observation
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 96894-1 | SARS-CoV-2 (COVID-19) sequencing and identification panel - Specimen by Molecular genetics method |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG51017-8 | SARSCoV2 detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | SARS-Coronavirus 2 Klade: |
| es-ES | Spanish (Spain) | Clado de SARS-CoV-2 (COVID-19): |
| es-MX | Spanish (Mexico) | SARS coronavirus 2 clado: |
| fr-FR | French (France) | Coronavirus SARS-CoV-2 clade: |
| it-IT | Italian (Italy) | SARS coronavirus 2 clade: Synonyms: Coronavirus della SARS Genetica molecolare Microbiologia Punto nel tempo (episodio) SARS-CoV-2 (COVID-19) SARS-CoV-2 (COVID-19) clade |
| nl-NL | Dutch (Netherlands) | SARS-CoV-2 clade: Synonyms: molgen SARS-virus severe acute respiratory syndrome coronavirus 2; |
| pl-PL | Polish (Poland) | Klad SARS-CoV-2: Synonyms: Koronawirus |
| zh-CN | Chinese (China) | SARS 冠状病毒 2 进化枝: Synonyms: 2019 新型冠状病毒; |
LOINC Terminology Service (API) using HL7® FHIR® Get Info
Requests to this service require a free LOINC username and password. Below is a sample of the possible capabilities. See the LOINC Terminology Service documentation for more information.
- CodeSystem lookup
- https:
//fhir.loinc.org/CodeSystem/$lookup?system=http: //loinc.org&code=96896-6
LOINC Copyright
Copyright © 2023 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright