Log In

Term Description

Qualitative detection of nucleic acids within the Open Reading Frame 1a (ORF1a) region of SARS coronavirus 2 (SARS-CoV-2) in respiratory specimens by nucleic acid amplification with probe-based detection.

LOINC Names Get Info

Fully-Specified Name
SARS coronavirus 2 ORF1a region:PrThr:Pt:Respiratory System Specimen:Ord:Probe.amp.tar
Long Common Name
SARS-CoV-2 (COVID-19) ORF1a region [Presence] in Respiratory system specimen by NAA with probe detection
Short Name
SARS-CoV-2 ORF1a Resp Ql NAA+probe
Display Name
SARS-CoV-2 (COVID-19) ORF1a region NAA+probe Ql (Respiratory system specimen)
Consumer Name Alpha Get Info
SARS-CoV-2 (COVID-19) ORF1a region, Respiratory system specimen

Part Model Get Info

  • Component
    SARS coronavirus 2 ORF1a region
    LP428394-3
    • Analyte
      SARS coronavirus 2 ORF1a region
      LP428394-3
      • Component Numerator
        SARS coronavirus 2 ORF1a region
        LP428394-3
        • Component Numerator Core
          SARS coronavirus 2 ORF1a region
          LP428394-3
        • Component Numerator Core Suffix
          NULL
           
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    PrThr
    LP217195-9
  • Time
    Pt
    LP6960-1
  • System
    Respiratory System Specimen
    LP436142-6
    • System Core
      Respiratory System Specimen
      LP436142-6
    • Super System
      NULL
       
  • Scale
    Ord
    LP7751-3
  • Method
    Probe.amp.tar
    LP6464-4

Example Answer List: LL360-9

Source: Regenstrief Institute
AnswerCodeScoreAnswer ID
PositiveCopyright http://snomed.info/sct ID:10828004 Positive (qualifier value)LA6576-8
NegativeCopyright http://snomed.info/sct ID:260385009 Negative (qualifier value)LA6577-6

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.71
Last Updated
Version 2.75 (MAJ)
Change Reason
Release 2.75: SYSTEM: There are 2 similar system's in LOINC: 1- Respiratory system 2- Respiratory specimen Due to an applied logic, the display in the System axis for 1 is Respiratory (adjective) without specification of sample, specimen, or other specific noun, while 2 is displayed fully as Respiratory specimen. Therefore for now we replaced 1 with Respiratory system specimen, which will affect 83 term. The result is replacing "Respiratory" with "Respiratory system specimen". This is the short approach. The bigger project is to potentially merge data that has either 1 or 2 together. This is a project to pass by the laboratory committee and will involve about 1500 concepts.;
Order vs. Observation
Both

Member of these Groups Get Info

LOINC GroupGroup Name
LG51017-8SARSCoV2 detection
LG51019-4SARSCoV2 molecular detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)SARS-CoV-2 (COVID-19) oblast ORF1a:Přítomnost nebo práh:Časový bod:Vzorek z dýchacích cest:Ordinální:Amplifikace nukleových kyselin s detekcí sondou
de-DEGerman (Germany)SARS-CoV-2 (COVID-19) ORF1a-Region:Nachweis oder Schwellenwert:Zeitpunkt:Probenmaterial vom Respirationstrakt:Ordinal:Zielfragmentamplifikation mit Sondendetektion
el-GRGreek (Greece)Περιοχή ORF1a κορωνοϊού SARS 2:PrThr:Pt:Δείγμα αναπνευστικού συστήματος:Ord:Ανιχνευτής.ενίσχυση.στόχου
Synonyms: MICRO Ord PrThr Pt Αναπνευστικό Αναπνευστικό σύστημα Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Δείγμα Δείγμα αναπνευστικού συστήματος Κορωνοϊός Κορωνοϊός SARS Κορωνοϊός SARS 2 Περιοχή Περιοχή ORF1a κορωνοϊού SARS 2
es-ESSpanish (Spain)Región ORF1a del SARS-CoV-2 (COVID-19):PrThr:Punto temporal:Muestra del sistema respiratorio:Ord:Sonda con amplificación dirigida
Synonyms: Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio
fr-FRFrench (France)Coronavirus SARS-CoV-2 région ORF1a:Présence/Seuil:Ponctuel:Échantillon du système respiratoire:Qualitatif:PCR amplification de cible
it-ITItalian (Italy)SARS coronavirus 2, regione ORF1a:PrThr:Pt:Campione da Sistema Respiratorio:Ord:Sonda.amp.tar
Synonyms: Campione da Apparato Respiratorio Coronavirus della SARS Microbiologia Presenza o Soglia Punto nel tempo (episodio) Regione ORF1a di SARS-CoV-2 (COVID-19) SARS-CoV-2 (COVID-19) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NLDutch (Netherlands)SARS-CoV-2 ORF1a-regio:aanwezigheid:moment:respiratoir monster:ordinaal:probe-detectie
Synonyms: probe.amp.tar SARS-virus severe acute respiratory syndrome coronavirus 2; 2019-nCoV; 2019 novel coronavirus; COVID-19 systema respiratorium; ademhalingsstelsel
pl-PLPolish (Poland)SARS koronawirus 2 gen ORF1a:granica wykrywalności:punkt w czasie:próbka z układu oddechowego:uporządkowany:sonda.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Koronawirus Koronawirus SARS-CoV-2 (COVID-19) region ORF1a
zh-CNChinese (China)SARS 冠状病毒 2 ORF1a 区:存在情况或阈值:时间点:呼吸系统标本:序数型:探针法.基因扩增.靶向
Synonyms: 2019 新型冠状病毒;2019 年新型冠状病毒;2019-nCoV;SARS-CoV-2;新型冠状病毒肺炎;新冠肺炎;Coronavirus disease 2019;COVID-19;冠状病毒疾病2019;严重急性呼吸综合征;severe acute respiratory syndrome;SARS;传染性非典型肺炎;infectious atypical pneumonia;非典 Ⅱ II SARS 冠状病毒 2 ORF1a 区（区域）;2019 新型冠状病毒;2019 年新型冠状病毒;2019-nCoV;SARS-CoV-2;新型冠状病毒肺炎;新冠肺炎;Coronavirus disease 2019;COVID-19;冠状病毒疾病2019;严重急性呼吸综合征;severe acute respiratory syndrome;SARS;传染性非典型肺炎;infectious atypical pneumonia;非典 SARS;SARS 病毒;SARS-CoV;严重急性呼吸综合征;严重急性呼吸综合征病毒;萨斯病毒;非典;非典型肺炎;非典型肺炎病毒;非典病毒 供检查用的材料;待检物;待试验物;样品;样本;试料;试样 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 区;地区;局部 受检物 呼吸道标本（样品、样本）;呼吸系统标本（样品、样本） 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 样品 样本 经过扩增的 脱氧核糖核酸探针 试样

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=98132-4