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Part Description

LP150045-5   Sequencing
Sequencing is a method used to determine the sequence of individual genes, larger genetic regions (i.e. clusters of genes or operons), full chromosomes or entire genomes. Historically, most sequencing has been performed using the chain termination method developed by Frederick Sanger in 1977. PMID: 271968 Sequencing technologies have improved dramatically, making them cheaper, faster, and more accurate. Next-generation sequencing (NGS), also known as high-throughput sequencing, deep sequencing, and second-generation sequencing, is a type of technology that uses parallel sequencing of multiple small fragments of DNA to determine sequence. This "high-throughput" technology has increased the speed and amount of DNA sequenced at a significantly reduced cost. PMID: 18576944 Several NGS platforms (ie, sequencing instruments and associated reagents) have been developed. Third-generation sequencing is another methodology currently under development that uses parallel sequencing similar to NGS. In contrast to NGS, third-generation sequencing uses single DNA molecules rather than amplified DNA as a template. PMID: 20858600 Source: Regenstrief LOINC

Panel Hierarchy

Details for each LOINC in Panel LHC-Forms

LOINCNameR/O/CCardinalityExample UCUM Units
101002-4Monkeypox virus sequencing panel - Specimen by Sequencing
Indent101003-2Monkeypox virus clade [Type] in Specimen by Sequencing
Indent101004-0Monkeypox virus lineage [Type] in Specimen by Sequencing
Indent96766-1GISAID sequence accession number
Indent87396-8GenBank accession number

LOINC Names Get Info

Fully-Specified Name
Monkeypox virus sequencing panel:-:Pt:XXX:-:Sequencing
Long Common Name
Monkeypox virus sequencing panel - Specimen by Sequencing
Short Name
MVPX sequencing panel Spec Seq
Display Name
Monkeypox virus sequencing panel Sequencing (Specimen)
Consumer Name Alpha Get Info
Monkeypox virus sequencing panel, Specimen

Part Model Get Info

  • Component
    Monkeypox virus sequencing panel
    LP433766-5
    • Analyte
      Monkeypox virus sequencing panel
      LP433766-5
      • Component Numerator
        Monkeypox virus sequencing panel
        LP433766-5
        • Component Numerator Core
          Monkeypox virus sequencing panel
          LP433766-5
        • Component Numerator Core Suffix
          NULL
           
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    -
    LP6769-6
  • Time
    Pt
    LP6960-1
  • System
    XXX
    LP7735-6
    • System Core
      XXX
      LP7735-6
    • Super System
      NULL
       
  • Scale
    -
    LP7747-1
  • Method
    Sequencing
    LP150045-5

Basic Attributes

Class
PANEL.MICRO
Type
Laboratory
First Released
Version 2.74
Last Updated
Version 2.75 (MIN)
Order vs. Observation
Order
Panel Type
Panel

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Virus opičích neštovic panel:-:Časový bod:XXX:-:Sekvenace
el-GRGreek (Greece)Πίνακας αλληλούχισης του ιού ευλογιάς των πιθήκων:-:Pt:XXX:-:Αλληλούχιση
Synonyms: - MICRO PANEL.MICRO Pt XXX Αλληλούχιση Ιός Ιός ευλογιάς των πιθήκων Πίνακας αλληλούχισης του ιού ευλογιάς των πιθήκων
es-ESSpanish (Spain)Panel de secuenciación del virus de la viruela del mono:Propiedades mixtas (sólo paneles):Punto temporal:XXX:-:Secuenciación
fr-FRFrench (France)Monkeypox virus séquençage panel:-:Ponctuel:Milieux divers:-:Séquençage
it-ITItalian (Italy)Monkeypox virus, panel di sequenziamento:-:Pt:XXX:-:Sequenziamento
Synonyms: Microbiologia Punto nel tempo (episodio) Set di prescrizione microbiologia
nl-NLDutch (Netherlands)'mpox'-virus sequencing panel:-:moment:XXX:-:sequencing
Synonyms: apenpokkenvirus; MPV; monkeypoxvirus apenpokkenvirus; MPVX; ''monkeypox''-virus
pl-PLPolish (Poland)Panel do sekwencjonowania wirusa ospy małpiej:-:punkt w czasie:XXX:-:sekwencjonowanie
Synonyms: Wirus ospy małpiej
zh-CNChinese (China)猴痘病毒序列测定组套:-:时间点:XXX:-:序列测定
Synonyms: mpox 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体 医嘱套餐 医嘱套餐类 医嘱套餐组 医嘱组 医嘱组.微生物学;实验室组套（组合、医嘱组、套餐、套餐医嘱、医嘱套餐、组合申请、组合项目）类.微生物学试验;医嘱组.微生物学试验;医嘱组类.微生物学;医嘱组类.微生物学试验;实验室医嘱组类.微生物学;微生物学医嘱组;微生物学医嘱组类 医嘱组合 医嘱组合类 医嘱组套 医嘱组套类 医嘱组类 多重;多重型;多重标尺类型;多重精度类型 套餐 套餐医嘱 套餐医嘱组 套餐医嘱组类 实验室医嘱套餐 实验室医嘱套餐类 实验室医嘱组 实验室医嘱组合类 实验室医嘱组套 实验室医嘱组套类 实验室套餐医嘱组 实验室套餐医嘱组类 实验室检验项目医嘱组合类 实验室检验项目组合类 序列分析;测序 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 时刻;随机;随意;瞬间 检验医嘱组合类 检验项目医嘱组合类 检验项目组合类 猴痘病毒序列测定（测序、序列分析）组套（组合、医嘱组、套餐、套餐医嘱、医嘱套餐、组合申请、组合项目） 组 组合 组合医嘱 组合类 组套

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=101002-4
Questionnaire definition
https://fhir.loinc.org/Questionnaire/?url=http://loinc.org/q/101002-4