106029-2
Varicella zoster virus DNA [Presence] in Genital specimen by NAA with probe detection
Active
Part Description
LP14853-3 Varicella zoster virus
Varicella zoster virus (VZV) is a double-stranded alphaherpesvirus that causes seasonal outbreaks of chickenpox and shingles in non-immunized populations. VZV is highly infectious and is transmitted by contact with the ruptured fluid filled blisters and respiratory secretions of infected individuals. Immunity post infection is usually lifelong though the latent virus inhabits the sensory nerve ganglia where it can reactivate causing shingles when immunity declines with aging.[http://jvi.asm.org/content/88/24/13936.full] In the over fifty strains of VZV that have been sequenced it has been found that a single nucleotide polymorphism occurs about every 100 bases. The patterns of polymorphisms in VZV correlate with different geographical regions of infection and is the basis for the classification of viral clades.[https://grose.lab.uiowa.edu/vzv-genomes-and-evolution] Breuer proposed the nomenclature for the VZV clades as 1-5 with the suspected clades VI and VII to be confirmed later. The geographical regions associated with the seven clades are as follows:
Clades 1 and 3-represent the dominant clades of the circulating VZV in Europe and the Americas
Clades 4 and 5-found in Africa
Clade VI found in France, Italy
Clade VII exclusively isolated in the US
Clade 2-Asia from Korea, Japan, China not found in India, Nepal and Bangladesh where clades 4 and 5 were dominant
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5054591/
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Varicella zoster virus DNA
- Property
- PrThr
- Time
- Pt
- System
- Genital
- Scale
- Ord
- Method
- Probe.amp.tar
Additional Names
- Short Name
- VZV DNA Genital Ql NAA+probe
- Display Name
- VZV DNA NAA+probe Ql (Genital specimen)
- Consumer Name Alpha Get Info
- Varicella zoster virus (VZV; Chickenpox), Genital specimen
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.78
- Last Updated
- Version 2.78
- Order vs. Observation
- Observation
Member of these Groups Get Info
LOINC Group | Group Name |
---|---|
LG32750-8 | Varicella zoster virus |
Language Variants Get Info
Tag | Language | Translation |
---|---|---|
el-GR | Greek (Greece) | Ιός ανεμευλογιάς-έρπητα ζωστήρα DNA: Synonyms: VZV |
es-ES | Spanish (Spain) | Virus Varicella zoster ADN: |
fr-BE | French (Belgium) | Virus varicelle-zona ADN: Synonyms: VZV |
fr-CA | French (Canada) | Virus varicelle-zona, ADN: |
it-IT | Italian (Italy) | Varicella zoster, virus DNA: Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus della varicella zoster |
nl-NL | Dutch (Netherlands) | varicella-zostervirus DNA: Synonyms: probe.amp.tar Varicella zoster virus |
ru-RU | Russian (Russian Federation) | Varicella zoster вирус ДНК: Synonyms: ДНК проба; |
tr-TR | Turkish (Turkey) | Varicella zoster virüsü DNA: Synonyms: Mevcut |
zh-CN | Chinese (China) | 水痘带状疱疹病毒 DNA: Synonyms: HHV-3 DNA HHV-3; |
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LOINC Copyright
Copyright © 2024 Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright