106029-2

Varicella zoster virus DNA [Presence] in Genital specimen by NAA with probe detection

Active

Part Description

LP14853-3 Varicella zoster virus
Varicella zoster virus (VZV) is a double-stranded alphaherpesvirus that causes seasonal outbreaks of chickenpox and shingles in non-immunized populations. VZV is highly infectious and is transmitted by contact with the ruptured fluid filled blisters and respiratory secretions of infected individuals. Immunity post infection is usually lifelong though the latent virus inhabits the sensory nerve ganglia where it can reactivate causing shingles when immunity declines with aging.http://jvi.asm.org/content/88/24/13936.full In the over fifty strains of VZV that have been sequenced it has been found that a single nucleotide polymorphism occurs about every 100 bases. The patterns of polymorphisms in VZV correlate with different geographical regions of infection and is the basis for the classification of viral clades.https://grose.lab.uiowa.edu/vzv-genomes-and-evolution Breuer proposed the nomenclature for the VZV clades as 1-5 with the suspected clades VI and VII to be confirmed later. The geographical regions associated with the seven clades are as follows:
Clades 1 and 3-represent the dominant clades of the circulating VZV in Europe and the Americas
Clades 4 and 5-found in Africa
Clade VI found in France, Italy
Clade VII exclusively isolated in the US
Clade 2-Asia from Korea, Japan, China not found in India, Nepal and Bangladesh where clades 4 and 5 were dominant
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5054591/ Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name: Varicella zoster virus DNA:PrThr:Pt:Genital:Ord:Probe.amp.tar
Long Common Name: Varicella zoster virus DNA [Presence] in Genital specimen by NAA with probe detection
Short Name: VZV DNA Genital Ql NAA+probe
Display Name: VZV DNA NAA+probe Ql (Genital specimen)
Consumer Name Alpha Get Info: Varicella zoster virus (VZV; Chickenpox), Genital specimen

Part Model Get Info

Component
Varicella zoster virus DNA
LP40115-5
- Analyte
  Varicella zoster virus DNA
  LP40115-5
  - Component Numerator
    Varicella zoster virus DNA
    LP40115-5
    - Component Numerator Core
      Varicella zoster virus
      LP14853-3
    - Component Numerator Core Suffix
      DNA
      LP32416-7
  - Component Denominator
    NULL
    - Component Denominator Core
      NULL
    - Component Denominator Core Suffix
      NULL
- Challenge
  NULL
- Adjustment
  NULL
- Count
  NULL
Property
PrThr
LP217195-9
Time
Pt
LP6960-1
- Time Core
  Pt
  LP6960-1
- Time Modifier
  NULL
System
Genital
LP7261-3
- System Core
  Genital
  LP7261-3
- Super System
  NULL
Scale
Ord
LP7751-3
Method
Probe.amp.tar
LP6464-4

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.78
Last Updated: Version 2.78 (ADD)
Order vs. Observation: Observation

Member of these Groups Get Info

LOINC Group	Group Name
LG32750-8	Varicella zoster virus

Language Variants Get Info

Tag	Language	Translation
cs-CZ	Czech (Czechia)	Virus Varicella zoster DNA:Přítomnost nebo práh:Časový bod:Genitál:Ordinální:Amplifikace nukleových kyselin s detekcí sondou
el-GR	Greek (Greece)	Ιός της ανεμοβλογιάς-έρπητα ζωστήρα DNA:PrThr:Pt:Γεννητικά:Ord:Ανιχνευτής.ενίσχυση.στόχου Synonyms: DNA MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Γεννητικά Ιός Ιός της ανεμοβλογιάς-έρπητα ζωστήρα
es-ES	Spanish (Spain)	Virus Varicella zoster ADN:PrThr:Punto temporal:Genital:Ord:Sonda con amplificación dirigida
fr-BE	French (Belgium)	Virus varicelle-zona ADN:PrThr:Temps ponctuel:Génital:Ordinal:Sonde avec amplification de la cible Synonyms: VZV
fr-FR	French (France)	Varicelle zona virus ADN:Présence/Seuil:Ponctuel:Prélèvement génital:Qualitatif:PCR amplification de cible
fr-CA	French (Canada)	Virus varicelle-zona, ADN:Présence-Seuil:Temps ponctuel:Génital:Ordinal:Sonde avec amplification de la cible
it-IT	Italian (Italy)	Varicella zoster, virus DNA:PrThr:Pt:Genitale:Ord:Sonda.amp.tar Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus della varicella zoster
nl-NL	Dutch (Netherlands)	varicella-zostervirus DNA:aanwezigheid:moment:genitaal monster:ordinaal:probe-detectie Synonyms: probe.amp.tar Varicella zoster virus
pl-PL	Polish (Poland)	Wirus ospy wietrznej i półpaśca DNA:granica wykrywalności:punkt w czasie:płciowy:uporządkowany:sonda.amplifikacja.cel Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Kwas deoksyrybonukleinowy VZV
ru-RU	Russian (Russian Federation)	Varicella zoster вирус ДНК:PrThr:ТчкВрм:Генитальный:Пор:Проба.усил.миш Synonyms: ДНК проба;ДНК зонд Порядковый Проба с мишени усилением Точка во времени;Момент
tr-TR	Turkish (Turkey)	Varicella zoster virüsü DNA:MevcEşik:Zmlı:Genital:Srl:Prob.amf.hdf Synonyms: Mevcut
zh-CN	Chinese (China)	水痘带状疱疹病毒 DNA:存在情况或阈值:时间点:生殖器:序数型:探针法.基因扩增.靶向 Synonyms: HHV-3 DNA HHV-3;VZ;VZV;人类疱疹病毒 3 型;人类疱疹病毒 III 型;带状疱疹;水痘;水痘带状疱疹;水痘病毒;Varicella zoster virus;水痘-带状疱疹病毒 VZV DNA 人类疱疹病毒 3 型 DNA 人类疱疹病毒 III 型 DNA 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向去氧核糖核酸;脱氧核糖核酸去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA）外生殖器;尿生殖;泌尿和生殖系统;泌尿生殖;泌尿生殖器;生殖器(多用于指男性的外生殖器);生殖器官;生殖道;男生殖器存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间水痘病毒 DNA 经过扩增的脱氧核糖核酸探针

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LOINC Copyright

Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.