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Part Descriptions

LP150045-5   Sequencing
Sequencing is a method used to determine the sequence of individual genes, larger genetic regions (i.e. clusters of genes or operons), full chromosomes or entire genomes. Historically, most sequencing has been performed using the chain termination method developed by Frederick Sanger in 1977. PMID: 271968 Sequencing technologies have improved dramatically, making them cheaper, faster, and more accurate. Next-generation sequencing (NGS), also known as high-throughput sequencing, deep sequencing, and second-generation sequencing, is a type of technology that uses parallel sequencing of multiple small fragments of DNA to determine sequence. This "high-throughput" technology has increased the speed and amount of DNA sequenced at a significantly reduced cost. PMID: 18576944 Several NGS platforms (ie, sequencing instruments and associated reagents) have been developed. Third-generation sequencing is another methodology currently under development that uses parallel sequencing similar to NGS. In contrast to NGS, third-generation sequencing uses single DNA molecules rather than amplified DNA as a template. PMID: 20858600 Source: Regenstrief LOINC

LP16747-5   Orientia tsutsugamushi
A gram-negative, rod-shaped to coccoid bacterium. It is the etiologic agent of SCRUB TYPHUS in humans and is transmitted by mites from rodent reservoirs. Source: National Library of Medicine, MeSH 2006

LP16747-5   Orientia tsutsugamushi
Orientia tsutsugamushi is the causative organism of scrub typhus, and the natural vector and reservoir is probably trombiculid mites (genus Leptotrombidium).The organism is an obligate intracellular pathogen, which needs to infect eukaryotic cells in order to multiply. The envelope is similar to that of Gram negative bacteria, but it is not easily stained with Gram stain and the Gimenez stain is preferred. Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details. Source: Wikipedia, Wikipedia

LOINC Names Get Info

Fully-Specified Name
Orientia tsutsugamushi:Prid:Pt:XXX:Nom:Sequencing
Long Common Name
Orientia tsutsugamushi identified in Specimen by Sequencing
Short Name
O tsut Spec Seq
Display Name
O. tsutsugamushi identified Sequencing Nom (Specimen)
Consumer Name Alpha Get Info
Orientia tsutsugamushi test, Specimen

Part Model Get Info

  • Component
    Orientia tsutsugamushi
    LP16747-5
    • Analyte
      Orientia tsutsugamushi
      LP16747-5
      • Component Numerator
        Orientia tsutsugamushi
        LP16747-5
        • Component Numerator Core
          Orientia tsutsugamushi
          LP16747-5
        • Component Numerator Core Suffix
          NULL
           
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    Prid
    LP6850-4
  • Time
    Pt
    LP6960-1
  • System
    XXX
    LP7735-6
    • System Core
      XXX
      LP7735-6
    • Super System
      NULL
       
  • Scale
    Nom
    LP7750-5
  • Method
    Sequencing
    LP150045-5

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.21
Last Updated
Version 2.78 (NAM)
Change Reason
Release 2.78: COMPONENT: Removed "Identified" from the component because it is implied by the Property "Prid"; Previous Releases: Changed method from Amplification/Sequencing because Amplification always occurs before sequencing
Order vs. Observation
Both

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Orientia tsutsugamushi:Přítomnost nebo identita:Časový bod:XXX:Nominální:Sekvenace
el-GRGreek (Greece)Βακτήριο Orientia tsutsugamushi:Prid:Pt:XXX:Nom:Αλληλούχιση
Synonyms: MICRO Nom Prid Pt XXX Αλληλούχιση Βακτήριο Orientia tsutsugamushi
es-ESSpanish (Spain)Orientia tsutsugamushi:Presencia o identidad:Punto temporal:XXX:Nom:Secuenciación
es-MXSpanish (Mexico)Orientia tsutsugamushi identificada:Presencia o identidad:Punto temporal:XXX:Nominal:Secuenciación
fr-CAFrench (Canada)Orientia tsutsugamushi:Présence ou identité:Temps ponctuel:XXX:Nominal:Séquençage
fr-FRFrench (France)Orientia tsutsugamushi:Identification:Ponctuel:Milieux divers:Résultat nominal:Séquençage
fr-BEFrench (Belgium)Orientia tsutsugamushi:Présence ou identité:Temps ponctuel:XXX:Nominal:Séquençage
it-ITItalian (Italy)Orientia tsutsugamushi:Prid:Pt:XXX:Nom:Sequenziamento
Synonyms: Microbiologia Presenza o Identità Punto nel tempo (episodio)
nl-NLDutch (Netherlands)Orientia tsutsugamushi:identificator:moment:XXX:nominaal:sequencing
pt-BRPortuguese (Brazil)Identificação de Orientia tsutsugamushi:Ident:Pt:XXX:Nom:Amplificação/sequenciamento
Synonyms: ; O tsut; R tsutsugamuchi; Rickettsia tsutsugamuchi; R tsutsugamushi; R orienta; Rickettsia orienta; Oriental scrub typhus; Rickettsia tsutsugamushi; O tsutsugamushi; Scrub typhus; Identity or presence; Point in time; Random; Misc; Miscellaneous; Unspecified; Other; Nominal; Amp/Seq; Amp/Seq; Isolated; Microbiology
tr-TRTurkish (Turkey)Orientia tsutsugamushi:MevcKimlik:Zmlı:XXX:Snf:Sekanslama
Synonyms: Dizi tayini
zh-CNChinese (China)恙虫病东方体:存在与否或特征标识:时间点:XXX:名义型:序列测定
Synonyms: 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 丛林型斑疹伤寒;东方斑疹伤寒;恙虫病;恙虫病立克次体;红虫病 分类型应答;分类型结果;名义性;名称型;名词型;名词性;标称性;没有自然次序的名义型或分类型应答 存在;存在与否;特征标识;身份;身份标识 序列分析;测序 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 时刻;随机;随意;瞬间

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=49126-6