Version 2.78

Status Information

Status
DISCOURAGED
Comment
Awaiting more information about usage of this term.

Part Descriptions

LP150045-5   Sequencing
Sequencing is a method used to determine the sequence of individual genes, larger genetic regions (i.e. clusters of genes or operons), full chromosomes or entire genomes. Historically, most sequencing has been performed using the chain termination method developed by Frederick Sanger in 1977. PMID: 271968 Sequencing technologies have improved dramatically, making them cheaper, faster, and more accurate. Next-generation sequencing (NGS), also known as high-throughput sequencing, deep sequencing, and second-generation sequencing, is a type of technology that uses parallel sequencing of multiple small fragments of DNA to determine sequence. This "high-throughput" technology has increased the speed and amount of DNA sequenced at a significantly reduced cost. PMID: 18576944 Several NGS platforms (ie, sequencing instruments and associated reagents) have been developed. Third-generation sequencing is another methodology currently under development that uses parallel sequencing similar to NGS. In contrast to NGS, third-generation sequencing uses single DNA molecules rather than amplified DNA as a template. PMID: 20858600 Source: Regenstrief LOINC

LP65665-9   Influenza virus A nucleoprotein
The Influenza nucleoprotein antibody test is useful as a screening test for detection of type A influenza viruses such as swine influenza virus (SIV), and influenza A viruses in other species such as equine, canine, and feline. Influenza virus nucleoprotein (NP) switches RNA synthesis from transcription mode to replication mode. It is therefore vital to the infectious cycle of the influenza virus. Although it is required for this process, the function of NP in replication is not yet clear. PMID: 9621005
Research suggests that the common ancestor of the H1N1 human and classical swine viruses is an avian virus rather than human or swine influenza A viruses. PMID: 2041090 Source: Regenstrief LOINC

Fully-Specified Name

Component
Influenza virus A nucleoprotein RNA
Property
PrThr
Time
Pt
System
Isolate
Scale
Ord
Method
Sequencing

Additional Names

Short Name
FLUAV NP RNA Islt Ql Seq
Display Name
FLUAV NP RNA Sequencing Ql (Isol)
Consumer Name Alpha Get Info
Influenza A NP

Example Answer List: LL1055-4

Source: Association of Public Health Laboratories
Answer Code Score Answer ID
Detected LA11882-0
Not detected LA11883-8
EquivocalCopyright http://snomed.info/sct ID:42425007 Equivocal (qualifier value) LA11885-3
InconclusiveCopyright http://snomed.info/sct ID:419984006 Inconclusive (qualifier value) LA9663-1
Specimen unsatisfactory for evaluationCopyright http://snomed.info/sct ID:125154007 Specimen unsatisfactory for evaluation (finding) LA13548-5

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.22
Last Updated
Version 2.56
Change Reason
Changed method from Amplification/Sequencing because Amplification always occurs before sequencing; The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
Order vs. Observation
Both

Member of these Groups Get Info

LOINC Group Group Name
LG32757-3 Influenza virus

Language Variants Get Info

Tag Language Translation
de-DE German (Germany) Influenza-Virus A Nukleoprotein RNA:Nachweis oder Schwellenwert:Zeitpunkt:Isolat:Ordinal:Sequenzierung
es-ES Spanish (Spain) Nucleoproteína del virus Influenza A RNA:PrThr:Punto temporal:Aislado:Ord:Secuenciación
es-MX Spanish (Mexico) ARN de nucleoproteína A del virus de la influenza:Presencia o umbral:Punto temporal:Aislado:Ordinal:Secuenciación
fr-BE French (Belgium) Virus Influenza A. nucléoprotéine ARN:PrThr:Temps ponctuel:Isolat:Ordinal:Séquençage
Synonyms: FLU A virus FLU virus FLU Virus A. Nucléoprotéine
it-IT Italian (Italy) Influenza virus A, nucleoproteina RNA:PrThr:Pt:Isolato:Ord:Sequenziamento
Synonyms: Microbiologia Nucleoproteina del virus dell''influenza A Presenza o Soglia Punto nel tempo (episodio) Virus dell''influenza Virus dell''influenza A
nl-NL Dutch (Netherlands) Influenzavirus A nucleoproteïne RNA:aanwezigheid:moment:isolaat:ordinaal:sequencing
pl-PL Polish (Poland) Influenza wirus A nukleoproteina RNA:granica wykrywalności:punkt w czasie:izolat:półilościowy:sekwencjonowanie
Synonyms: Nukleoproteina wirusa grypy typu A RNA nukleoproteiny wirusa grypy typu A Wirus grypy Wirus grypy typ A
pt-BR Portuguese (Brazil) Influenza vírus A nucleoproteína cDNA:ACnc:Pt:Isolado:Ord:Amplificação/sequenciamento
Synonyms: ; FLUAV NP; Avian influenza; Fowl plague; Influenza A virus; FLUA; Bird flu; FLUV; Influ; Arbitrary concentration; Point in time; Random; Islt; Isol; Ql; Ordinal; QL; Qualitative; Qual; Screen; Amp/Seq; Amp/Seq; complementary DNA; Microbiology
tr-TR Turkish (Turkey) Influenza virus A nucleoprotein RNA:MevcEşik:Zmlı:İzolat:Srl:Sekanslama
Synonyms: Dizi tayini Mevcut
zh-CN Chinese (China) 流感病毒 A 型核蛋白 RNA:存在情况或阈值:时间点:分离株:序数型:序列测定
Synonyms: A 型 A 型流感;A 型流感病毒;FLUA;FLUAV;家禽鼠疫;流感 A;流感 A 型;流感甲型;流感病毒甲型;甲型流感;甲型流感病毒;瘟疫;禽流感;禽流行性感冒;禽疫;鸡瘟 A 型流感病毒核蛋白;FLUA NP;FLUA 核蛋白;FLUAV NP;FLUAV 核蛋白;流感病毒 A 型核蛋白（Influenza virus A nucleoprotein，FLUAV NP）;流感病毒甲型核蛋白;甲型流感病毒核蛋白 FLUV;Influ;列性感冒病毒;流行性感冒病毒 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 分离物;分离菌;分离菌株;隔离种群 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 序列分析;测序 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 时刻;随机;随意;瞬间 核糖核酸;Ribonucleic acid

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=50704-6