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Part Descriptions

LP21132-3   Chikungunya virus
A species of ALPHAVIRUS causing an acute dengue-like fever. Source: National Library of Medicine, MeSH 2006

LP21132-3   Chikungunya virus
Chikungunya virus (CHIKV) belongs to the mosquito-borne alphavirus genus, in the family Togaviridae, and was first observed in epidemic form in Africa. Serologically, CHIKV belongs to the Semliki Forest (SF) subgroup of alphaviruses. Infection in humans is characterized by rash, high fever and, its hallmark feature, severe arthritis that can persist for years. CHIKV is a small, spherical, enveloped, positive-strand RNA virus. The virion consists of an envelope and a nucleocapsid. The envelope glycoproteins of alphaviruses are the distinguishing factors for testing. The CHIKV genome encodes for two polyproteins; the non-structural polyprotein consisting of four proteins (nsP1, nsP2, nsP3 and nsP4) and the structural polyprotein consisting of five proteins (Capsid, E3, E2, 6K and E1). CHIKV has spikes on the virion surface that are each formed by three E1-E2 heterodimers, where the E1 glycoproteins mediate fusion and E2 glycoproteins interact with the host receptor. PMID: 20111039
CHIKV can be detected between the first and fourth day of infection (the acute phase) using PCR or virus cultivation, and virus-specific IgM and IgG antibodies can be detected during the 8th to the 10th day of infection. Antibody investigation should be performed using serum samples from the acute and convalescent stage. Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name
Chikungunya virus RNA:PrThr:Pt:XXX:Ord:Probe.amp.tar
Long Common Name
Chikungunya virus RNA [Presence] in Specimen by NAA with probe detection
Short Name
CHIKV RNA Spec Ql NAA+probe
Display Name
CHIKV RNA NAA+probe Ql (Specimen)
Consumer Name Alpha Get Info
Chikungunya virus, Specimen

Part Model Get Info

  • Component
    Chikungunya virus RNA
    LP66615-3
    • Analyte
      Chikungunya virus RNA
      LP66615-3
      • Component Numerator
        Chikungunya virus RNA
        LP66615-3
        • Component Numerator Core
          Chikungunya virus
          LP21132-3
        • Component Numerator Core Suffix
          RNA
          LP32423-3
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    PrThr
    LP217195-9
  • Time
    Pt
    LP6960-1
  • System
    XXX
    LP7735-6
    • System Core
      XXX
      LP7735-6
    • Super System
      NULL
       
  • Scale
    Ord
    LP7751-3
  • Method
    Probe.amp.tar
    LP6464-4

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.24
Last Updated
Version 2.69 (MIN)
Change Reason
The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
Order vs. Observation
Both

Member of these Groups Get Info

LOINC GroupGroup Name
LG51028-5Chikungunya virus

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Virus Chikungunya RNA:Přítomnost nebo práh:Časový bod:XXX:Ordinální:Amplifikace nukleových kyselin s detekcí sondou
de-DEGerman (Germany)Chikungunya-Virus RNA:Nachweis oder Schwellenwert:Zeitpunkt:XXX:Ordinal:Zielfragmentamplifikation mit Sondendetektion
el-GRGreek (Greece)Ιός Chikungunya RNA:PrThr:Pt:XXX:Ord:Ανιχνευτής.ενίσχυση.στόχου
Synonyms: MICRO Ord PrThr Pt RNA XXX Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Ιός Ιός Chikungunya
es-ESSpanish (Spain)Virus Chikungunya RNA:PrThr:Punto temporal:XXX:Ord:Sonda con amplificación dirigida
es-MXSpanish (Mexico)ARN del virus Chikungunya:Presencia o umbral:Punto temporal:XXX:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-CAFrench (Canada)Virus Chikungunya ARN:Présence-Seuil:Temps ponctuel:XXX:Ordinal:Sonde avec amplification de la cible
fr-FRFrench (France)Chikungunya virus ARN:Présence/Seuil:Ponctuel:Milieux divers:Qualitatif:PCR amplification de cible
fr-BEFrench (Belgium)Virus Chikungunya ARN:PrThr:Temps ponctuel:XXX:Ordinal:Sonde avec amplification de la cible
it-ITItalian (Italy)Chikungunya virus RNA:PrThr:Pt:XXX:Ord:Sonda.amp.tar
Synonyms: CHIK Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NLDutch (Netherlands)Chikungunya-virus RNA:aanwezigheid:moment:XXX:ordinaal:probe-detectie
Synonyms: probe.amp.tar
pl-PLPolish (Poland)Wirus Chikungunya RNA:granica wykrywalności:punkt w czasie:XXX:uporządkowany:sonda.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy RNA wirusa Chikungunya Wirus Chikungunya
pt-BRPortuguese (Brazil)Chikungunya vírus Ac:ACnc:Pt:XXX:Ord:Sonda com limite de detecção da amplificação de alvo
Synonyms: Ribonucleic acid; CHIKV; Arbitrary concentration; Point in time; Random; Misc; Miscellaneous; Unspecified; Other; Ql; Ordinal; QL; Qualitative; Qual; Screen; PCR; Polymerase chain reaction; Transcription mediated amplification; NASBA; Nucleic acid sequence based analysis; SDA; Strand Displacement Amplification; LAT; Ligation-activated transcription; 3SR SR; 3 Self-Sustaining Sequence Replication; LCR; Ligase chain reaction; QBR; Q-Beta Replicase or probe amplification category method; Probe with target amplification; NAAT; TMA; Amp Prb; Probe with ampification; DNA probe; Amplified; Microbiology
ru-RURussian (Russian Federation)Чикунгунья вирус РНК:PrThr:ТчкВрм:XXX:Пор:Проба.усил.миш
Synonyms: ДНК проба;ДНК зонд Порядковый Проба с мишени усилением Точка во времени;Момент
tr-TRTurkish (Turkey)Chikungunya virus RNA:MevcEşik:Zmlı:XXX:Srl:Prob.amf.hdf
Synonyms: Mevcut
zh-CNChinese (China)基孔肯亚病毒 RNA:存在情况或阈值:时间点:XXX:序数型:探针法.基因扩增.靶向
Synonyms: 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 奇昆古尼亚病毒;基孔肯雅病毒;CHIKV 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 核糖核酸;Ribonucleic acid 经过扩增的 脱氧核糖核酸探针

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https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=51664-1