74472-2

Middle East respiratory syndrome coronavirus (MERS-CoV) N3 gene RNA [Presence] in Specimen by NAA with probe detection

Active

Term Description

Real-time PCR is performed to detect the presence of MERS-CoV RNA in respiratory specimens (nasopharyngeal, oropharyngeal swabs, sputum, lower respiratory aspirates/washes), serum, and stool. This code was created for, but not limited in use to, the submitter's primer and probe set, NCV-2012 rRT-PCR (CDC; Catalog #KT0136), which targets the nucleocapsid protein gene (NCV.N2 and NCV.N3) and upstream the MERS-CoV envelope protein gene (NCV.upE).
Source: Regenstrief LOINC

Part Description

LP175715-4 Middle East respiratory syndrome coronavirus N3 gene
The Middle East respiratory syndrome coronavirus (MERS-CoV), also termed NCV-2012, EMC/2012 or SARS-like virus, is a Betacoronavirus, a novel coronavirus (nCoV). Coronaviruses commonly cause respiratory illnesses, including the common cold, but the MERS-CoV is more lethal. The first MERS-CoV case was reported in September 2012 in the Middle East. Testing is currently (2013) restricted to patients exhibiting the clinical symptoms of MERS-CoV infection and having the epidemiological risk factors. Several highly sensitive, confirmatory real-time RT-PCR assays exist for rapid identification of MERS-CoV from patient samples (such as bronchoalveolar lavage or sputum). Targets include upE (targets elements upstream of the E gene), 1A (targets the ORF1a gene) and nucleocapsid protein genes (specific to MERS-CoV). Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details. Source: Wikipedia, MERS-CoV (Wikipedia)

Fully-Specified Name

Component: Middle east respiratory syndrome coronavirus N3 gene RNA
Property: PrThr
Time: Pt
System: XXX
Scale: Ord
Method: Probe.amp.tar

Additional Names

Short Name: MERS-CoV N3 RNA Spec Ql NAA+probe
Display Name: MERS-CoV N3 gene RNA NAA+probe Ql (Specimen)
Consumer Name Alpha Get Info: Middle East respiratory syndrome coronavirus (MERS-CoV), Specimen

Example Answer List: LL744-4

Source: Regenstrief Institute

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.46
Last Updated: Version 2.69
Change Reason: The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
Order vs. Observation: Both

Member of these Panels

LOINC	Long Common Name
74408-6	Middle East respiratory syndrome coronavirus (MERS-CoV) RNA panel - Specimen

Language Variants Get Info

Tag	Language	Translation
de-DE	German (Germany)	Middle East respiratory syndrome Coronavirus (MERS CoV) N3-Gen RNA:Nachweis oder Schwellenwert:Zeitpunkt:XXX:Ordinal:Zielfragmentamplifikation mit Sondendetektion
es-ES	Spanish (Spain)	Gen del sindrome respiratorio por Coronavirus de Oriente medio tipo N3 RNA:PrThr:Punto temporal:XXX:Ord:Sonda con amplificación dirigida
es-MX	Spanish (Mexico)	Síndrome respiratorio de Oriente Medio coronavirus gen N3 ARN:Presencia o umbral:Punto temporal:XXX:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-FR	French (France)	Coronavirus MERS ARN gène N3:Présence/Seuil:Ponctuel:Milieux divers:Qualitatif:PCR amplification de cible
it-IT	Italian (Italy)	Sindrome respiratoria mediorientale da Coronavirus (MERS), gene N3 RNA:PrThr:Pt:XXX:Ord:Sonda.amp.tar Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NL	Dutch (Netherlands)	Middle East Respiratory Syndrome-coronavirus N3 gen RNA:aanwezigheid:moment:XXX:ordinaal:probe-detectie Synonyms: MERS-coronavirus MERS-coronavirus N3 probe.amp.tar
pt-BR	Portuguese (Brazil)	Medio Oriente sindrome respiratória coronavírus N3 gene RNA:Limiar:Pt:XXX:Ord:Sonda com limite de detecção da amplificação de alvo
ru-RU	Russian (Russian Federation)	Ближневосточный респираторный синдром коронавирус N3 ген РНК:PrThr:ТчкВрм:XXX:Пор:Проба.усил.миш Synonyms: ДНК проба;ДНК зонд Порядковый Проба с мишени усилением Точка во времени;Момент
tr-TR	Turkish (Turkey)	Orta doğu respiratuvar sendrom koronavirüs N3 geni RNA:MevcEşik:Zmlı:XXX:Srl:Prob.amf.hdf Synonyms: Mevcut
zh-CN	Chinese (China)	中东呼吸综合征冠状病毒 N3 基因 RNA:存在情况或阈值:时间点:XXX:序数型:探针法.基因扩增.靶向 Synonyms: 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项中东呼吸道综合征冠状病毒;中东呼吸系统综合征冠状病毒;中東呼吸症候群冠狀病毒;MERS-CoV;MERSCoV;Middle east respiratory syndrome coronavirus;中东呼吸综合症冠状病毒依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖核酸;Ribonucleic acid 经过扩增的脱氧核糖核酸探针遗传基因;遗传因子;吉恩;生物基因

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