Log In

Term Description

This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.

Part Description

LP185680-8   Serratia marcescens gyrB gene
Serratia marcescens is an important cause of hospital-acquired urinary tract and bloodstream infections. The gyrB gene is conserved among strains of S Marcescens, and therefore, the presence of the gene in clinical specimens can be used to identify this organism as one of the pathogens responsible for a specific infection. PMID: 25070509 Source: Regenstrief LOINC, PMID: 25070509

LOINC Names Get Info

Fully-Specified Name
Serratia marcescens gyrB gene:PrThr:Pt:XXX.swab:Ord:Probe.amp.tar
Long Common Name
Serratia marcescens gyrB gene [Presence] in Swab specimen by NAA with probe detection
Short Name
S marcesc gyrB Swab Ql NAA+probe
Display Name
S. marcescens gyrB gene NAA+probe Ql (Swab specimen)
Consumer Name Alpha Get Info
Serratia marcescens gyrB gene, Swab specimen

Part Model Get Info

  • Component
    Serratia marcescens gyrB gene
    LP185680-8
    • Analyte
      Serratia marcescens gyrB gene
      LP185680-8
      • Component Numerator
        Serratia marcescens gyrB gene
        LP185680-8
        • Component Numerator Core
          Serratia marcescens gyrB gene
          LP185680-8
        • Component Numerator Core Suffix
          NULL
           
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    PrThr
    LP217195-9
  • Time
    Pt
    LP6960-1
  • System
    XXX.swab
    LP189536-8
  • Scale
    Ord
    LP7751-3
  • Method
    Probe.amp.tar
    LP6464-4

Example Answer List: LL2994-3

Source: Bioinfomatics Research and Testing Laboratory
AnswerCodeScoreAnswer ID
Low (< 10^5 bacteria)LA21375-3
Medium (10^5-10^7 bacteria)LA21374-6
High (> 10^7 bacteria)LA21373-8

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.52
Last Updated
Version 2.71 (MIN)
Change Reason
The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
Order vs. Observation
Observation

Member of these Panels

LOINCLong Common Name
76585-9Wound microorganism gene identification panel by NAA with probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Serratia marcescens gen gyrB:Přítomnost nebo práh:Časový bod:Výtěr:Ordinální:Amplifikace nukleových kyselin s detekcí sondou
de-DEGerman (Germany)Serratia marcescens gyrB-Gen:Nachweis oder Schwellenwert:Zeitpunkt:XXX.Abstrich:Ordinal:Zielfragmentamplifikation mit Sondendetektion
el-GRGreek (Greece)Γονίδιο gyrB του Serratia marcescens:PrThr:Pt:XXX.επίχρισμα:Ord:Ανιχνευτής.ενίσχυση.στόχου
Synonyms: MICRO Ord PrThr Pt Serratia marcescens (Σερράτια) XXX XXX.επίχρισμα Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Γονίδιο Γονίδιο gyrB του Serratia marcescens
es-ESSpanish (Spain)gen gyrB Serratia marcescens:PrThr:Punto temporal:Escobillon XXX:Ord:Sonda con amplificación dirigida
es-MXSpanish (Mexico)Gen gyrB de Serratia marcescens:Presencia o umbral:Punto temporal:XXX.swab:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-FRFrench (France)Serratia marcescens gyrB gène:Présence/Seuil:Ponctuel:Prélèvement divers:Qualitatif:PCR amplification de cible
it-ITItalian (Italy)Serratia marcescens, gene gyrB:PrThr:Pt:XXX.tampone:Ord:Sonda.amp.tar
Synonyms: Gene gyrB di Serratia marcescens Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PLPolish (Poland)Serratia marcescens gyrB gen:granica wykrywalności:punkt w czasie:XXX.wymaz:uporządkowany:sonda.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Gen gyrB Serratia marcescens
tr-TRTurkish (Turkey)Serratia marcescens gyrB geni:MevcEşik:Zmlı:XXX.sürüntü:Srl:Prob.amf.hdf
Synonyms: Mevcut
zh-CNChinese (China)粘质沙雷氏菌 gyrB 基因:存在情况或阈值:时间点:XXX.拭子:序数型:探针法.基因扩增.靶向
Synonyms: XXX.拭子（拭样、采样刷、样品刷、药签、棉签）;未作说明的（此处不作说明的、不明）体系（标本、样品、样本、试样、系统）.拭子 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 粘质沙雷氏菌（粘质沙雷菌） gyrB 基因 粘质沙雷菌 经过扩增的 脱氧核糖核酸探针 遗传基因;遗传因子;吉恩;生物基因

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=76576-8