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Term Description

This test targets the fusA gene that is common to three species in the Campylobacter group -- coli, jejuni and lari -- and does not distinguish between the three species. This term was created for, but is not limited in use to, Nanosphere's Verigene Enteric Pathogens Nucleic Acid Test, which is intended for the detection and identification of common pathogenic enteric bacteria, viruses, and genetic virulence markers in stool specimens from individuals with signs and symptoms of gastrointestinal infection.

Part Descriptions

LP200477-0   Campylobacter coli+jejuni+lari fusA gene
Campylobacter (meaning 'twisted bacteria') is a genus of bacteria that are Gram-negative, spiral, and microaerophilic. Motile, with either uni- or bi-polar flagella, the organisms have a characteristic spiral/corkscrew appearance and are oxidase-positive. Campylobacter jejuni is now recognized as one of the main causes of bacterial foodborne disease in many developed countries. At least a dozen species of Campylobacter have been implicated in human disease, with C. jejuni and C. coli the most common. C. fetus causes spontaneous abortions in cattle and sheep, and is an opportunistic pathogen in humans. Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details. Source: Wikipedia, Wikipedia

LP99310-2   Campylobacter
Campylobacter species is a gram-negative comma or S-shaped motile bacteria. Most infections occur from eating raw or undercooked poultry or by touching a contaminated object. Other sources of Campylobacter include water, animals, and unpasteurized milk. Symptoms begin 2-5 days after being exposed and include bloody diarrhea, fever, abdominal cramps, nausea, and vomiting. Some people are asymptomatic. Campylobacter can spread to the bloodstream and cause life-threatening illness in immunocompromised patients. C jejuni is the primary species found in campylobacter infections. Campylobacter is identified in stool, body tissue, and fluid cultures.https://www.cdc.gov/campylobacter/faq.html Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name
Campylobacter coli+jejuni+lari fusA gene:PrThr:Pt:Stool:Ord:Probe.amp.tar
Long Common Name
Campylobacter coli+jejuni+lari fusA gene [Presence] in Stool by NAA with probe detection
Short Name
C coli+jejuni+lari fusA Stl Ql NAA+probe
Display Name
C. coli+jejuni+lari fusA gene NAA+probe Ql (Stl)
Consumer Name Alpha Get Info
Campylobacter coli+jejuni+lari fusA gene, Stool

Part Model Get Info

  • Component
    Campylobacter coli+jejuni+lari fusA gene
    LP200477-0
    • Analyte
      Campylobacter coli+jejuni+lari fusA gene
      LP200477-0
      • Component Numerator
        Campylobacter coli+jejuni+lari fusA gene
        LP200477-0
        • Component Numerator Core
          Campylobacter coli+jejuni+lari fusA gene
          LP200477-0
        • Component Numerator Core Suffix
          NULL
           
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    PrThr
    LP217195-9
  • Time
    Pt
    LP6960-1
  • System
    Stool
    LP7604-4
    • System Core
      Stool
      LP7604-4
    • Super System
      NULL
       
  • Scale
    Ord
    LP7751-3
  • Method
    Probe.amp.tar
    LP6464-4

Example Answer List: LL744-4

Source: Regenstrief Institute
AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.54
Last Updated
Version 2.73 (MIN)
Change Reason
The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
Order vs. Observation
Observation
Common Test Rank Get Info
3797

Member of these Panels

LOINCLong Common Name
79381-0Gastrointestinal pathogens panel - Stool by NAA with probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Campylobacter coli+jejuni+lari gen fusA:Přítomnost nebo práh:Časový bod:Stolice:Ordinální:Amplifikace nukleových kyselin s detekcí sondou
de-DEGerman (Germany)Campylobacter coli+jejuni+lari fusA-Gen:Nachweis oder Schwellenwert:Zeitpunkt:Stuhl:Ordinal:Zielfragmentamplifikation mit Sondendetektion
el-GRGreek (Greece)Γονίδιο fusA του Campylobacter coli+jejuni+lari (Καμπυλοβακτηρίδιο):PrThr:Pt:Κόπρανα:Ord:Ανιχνευτής.ενίσχυση.στόχου
Synonyms: MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Βακτήριο Campylobacter coli Βακτήριο Campylobacter coli+jejuni (Καμπυλοβακτηρίδιο) Γονίδιο Γονίδιο fusA του Campylobacter coli+jejuni+lari (Καμπυλοβακτηρίδιο) Κόπρανα
es-ESSpanish (Spain)gen fusA de Campylobacter coli+jejuni+lari:PrThr:Punto temporal:Heces:Ord:Sonda con amplificación dirigida
es-MXSpanish (Mexico)Campylobacter coli + jejuni + lari gen fusA:Presencia o umbral:Punto temporal:Heces:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-FRFrench (France)Campylobacter coli+jejuni+lari gène fusA:Présence/Seuil:Ponctuel:Selle:Qualitatif:PCR amplification de cible
it-ITItalian (Italy)Campylobacter coli+jejuni+lari fusA gene:PrThr:Pt:Feci:Ord:Sonda.amp.tar
Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NLDutch (Netherlands)Campylobacter coli + jejuni + lari fusA-gen:aanwezigheid:moment:feces:ordinaal:probe-detectie
Synonyms: campylobacter coli+jejuni+lari fusA gen ontlasting; feces probe.amp.tar
pl-PLPolish (Poland)Campylobacter coli+jejuni+lari fusA gen:granica wykrywalności:punkt w czasie:kał:uporządkowany:sonda.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Gen fusA Campylobacter coli+jejuni+lari
tr-TRTurkish (Turkey)Campylobacter coli+jejuni+lari fusA geni:MevcEşik:Zmlı:Dışkı:Srl:Prob.amf.hdf
Synonyms: Gaita; feçes Mevcut
zh-CNChinese (China)结肠弯曲菌+空肠弯曲菌+海鸥弯曲菌 fusA 基因:存在情况或阈值:时间点:大便:序数型:探针法.基因扩增.靶向
Synonyms: 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 便;大肠运动;排便;粪便;肠运动 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 经过扩增的 结肠弯曲杆菌;大肠弯曲菌 结肠弯曲菌（结肠弯曲杆菌、大肠弯曲菌）+空肠弯曲菌（空肠弯曲杆菌） 结肠弯曲菌（结肠弯曲杆菌、大肠弯曲菌）+空肠弯曲菌（空肠弯曲杆菌）+海鸥弯曲菌（红嘴鸥弯曲菌、海鸥弯曲杆菌、红嘴鸥弯曲杆菌） fusA 基因 脱氧核糖核酸探针 遗传基因;遗传因子;吉恩;生物基因

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CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=79382-8