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Term Description

Detection of targeted nucleic acid sequences in the Bordetella holmesii fumC gene by PCR-based methods. This term was created for, but not limited in use to, the Verigene® Respiratory Pathogens Flex Nucleic Acid Test (RP Flex), a multiplexed, qualitative test for the detection and identification of multiple viral and bacterial genetic virulence markers from nasopharyngeal swab specimens.

Part Description

LP206590-4   Bordetella holmesii fumC gene
Bordetella holmesii is a Gram-negative bacillus associated with bacteremia, endocarditis, and respiratory illness, mainly in immunocompromised patients. PMID: 14999621 B. holmesii can be detected by PCR-based methods targeting fumC, a housekeeping gene which encodes the fumarate hydratase class II protein. Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name
Bordetella holmesii fumC gene:PrThr:Pt:Nph:Ord:Probe.amp.tar
Long Common Name
Bordetella holmesii fumC gene [Presence] in Nasopharynx by NAA with probe detection
Short Name
B holmesii fumC Nph Ql NAA+probe
Display Name
B. holmesii fumC gene NAA+probe Ql (Nph)
Consumer Name Alpha Get Info
Bordetella holmesii fumC gene, Nasopharynx

Part Model Get Info

  • Component
    Bordetella holmesii fumC gene
    LP206590-4
    • Analyte
      Bordetella holmesii fumC gene
      LP206590-4
      • Component Numerator
        Bordetella holmesii fumC gene
        LP206590-4
        • Component Numerator Core
          Bordetella holmesii fumC gene
          LP206590-4
        • Component Numerator Core Suffix
          NULL
           
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    PrThr
    LP217195-9
  • Time
    Pt
    LP6960-1
  • System
    Nph
    LP30875-6
  • Scale
    Ord
    LP7751-3
  • Method
    Probe.amp.tar
    LP6464-4

Example Answer List: LL744-4

Source: Regenstrief Institute
AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.56
Last Updated
Version 2.73 (MIN)
Order vs. Observation
Observation
Common Test Rank Get Info
9078

Member of these Panels

LOINCLong Common Name
78922-2Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Bordetella holmesii gen fumC:Přítomnost nebo práh:Časový bod:Nosohltan:Ordinální:Amplifikace nukleových kyselin s detekcí sondou
el-GRGreek (Greece)Γονίδιο fumC βακτηρίου Bordetella holmesii:PrThr:Pt:Nph:Ord:Ανιχνευτής.ενίσχυση.στόχου
Synonyms: MICRO Nph Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Βακτήριο Bordetella holmesii Γονίδιο Γονίδιο fumC βακτηρίου Bordetella holmesii
es-ESSpanish (Spain)Gen fumC de Bordetella holmesii:PrThr:Punto temporal:Nasofaringe:Ord:Sonda con amplificación dirigida
es-MXSpanish (Mexico)Gen fumC de Bordetella holmesii:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-FRFrench (France)Bordetella holmesii gène fumC:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:PCR amplification de cible
it-ITItalian (Italy)Bordetella holmesii, gene fumC:PrThr:Pt:Nph:Ord:Sonda.amp.tar
Synonyms: Gene fumC Bordetella holmesii Microbiologia Presenza o Soglia Punto nel tempo (episodio) Rinofaringe Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NLDutch (Netherlands)Bordetella holmesii fumC-gen:aanwezigheid:moment:neusholte:ordinaal:probe-detectie
Synonyms: bordetella holmesii fumC gen bordetella holmseii probe.amp.tar
pl-PLPolish (Poland)Bordetella holmesii fumC gen:granica wykrywalności:punkt w czasie:nosogardziel:uporządkowany:sonda.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Gen fumC Bordetella holmesii
zh-CNChinese (China)霍氏博德特菌 fumC 基因:存在情况或阈值:时间点:鼻咽:序数型:探针法.基因扩增.靶向
Synonyms: 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 经过扩增的 脱氧核糖核酸探针 遗传基因;遗传因子;吉恩;生物基因 霍氏博德特菌（霍氏鲍特菌） fumC 基因 霍氏鲍特菌 鼻咽标本;鼻咽部;鼻咽部标本

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=80599-4